| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678314
Identifier: 37678314
GI number: 37678314
Start: 136670
End: 138076
Strand: Direct
Name: 37678314
Synonym: VV0130
Alternate gene names: NA
Gene position: 136670-138076 (Clockwise)
Preceding gene: 37678312
Following gene: 37678315
Centisome position: 4.07
GC content: 39.02
Gene sequence:
>1407_bases TTGATTGAGCAGAGTGAGGTATTTCCAGAGGACTATGGTATTGATTACTGTCTTATGTGGATCAATACGGATAAATATCC TTCATTTACCAGTAGGGCAGCCCCTGATAGTGGTGAGATAATCCACGAAGTAAATGACAATTCAAAACCATTTATTTATA AACTTCCGATTTTAGTTGACCCAGATGGCATTAATGTAGTGCCAGTCAATTTATACCTGCACTCTCTATTGTCAAATCCA GATATATCATCCGTTGATACAATTGAATCTCATGCAAATGCGTTATTAAGCTTCTATCGTTGGATGAGTATGGAAATCCC AGAACATACTGACAAAAGAACAGGTGTCTTGATTGAAGAGAAGCTTCCATTAACAATATTTGACTGCACAGAGAAAGTAG AAGAAAGCCCAGTCGTTAGATATCGTGATTACTTATTAGAGAATCTTTATACCGAAGATGAAAATGGGAAAATCGGTGGT TCTCCAAATACGGCTTCTAGCTATGTACTAAAAGTAGTTGCTTACTACACCTATCTTCATCGCCAACGGATAGTCCCACT TAGCAAAACTTTTCGCCCATTTGAGTTTTCAGCCAAGAAAGTTCGTATACAGAACAAAAATAAGAGAGCGCAACATGACA TGCTCTCACATCTCAATAGTTATCGCGGCGATATTACCGTGTATACGACGGGTCTCACCAAGCCATTTAAGAACAGACAA AAGCCTCAAAATGCTGATATCCGCGAGCTACGTCCCTTGCGTGAAGATGAAAAACAAGCCTTTTACCGATATATCGATGT GGAAAATTCGTCTGATACTAAGGACTTAATGTTGTACACGGCAACTGAGGTTGGGGTGAGACTTGAGGAACTGATAACTT TTCCTGCTTCTGTCGTAGATAGGCCAAAATCTAAAGTTATGAAAGTGCTAATTGGTGAGCGCATCAATGGTTGTCTTACC AAATACAGAAAAGAGAGAACGATCGAGATTCCAGACTACGTTATGGATCTTTTGTACGAGTACAAGCTAAGTAAGGCAAG GAAGGAAGCTATTGACAGTGGGTTATTGCGCCATAATCACTTATTCGTTCAATCTAATGGCAGTATTTACGCACCAAACA CAATTCAAAAGCATGTGGAAGCTGTACGCAATGATATGATTCTTAGCGGGCTTGATATTTATTTTGTTACGCATGATTTA AGAGCTACTTTTGCGACCGATTGGCTGTACAAGAGACATATTGAAACAGGTAAGCCCTTTGAGGCACTGATCTCCGAACT AGCATACTTGATGGGGCATGAAAATACAGGTACTACTCAAAAATACATTAACTATCTAAATGATGATAAAACATGGTTTG AATTCTCTCAGCGAAAAAATCAATTTGCACAAGAAGTGTTGAGGTGA
Upstream 100 bases:
>100_bases TAGACGACGCAAGTTAATAAGTTGTGACTATAAAAAATTAGACATAATGGGTTTGTTAGCTTAGTGTAGTGCTATAAATG TTTGATTATTTGGTGCTGAT
Downstream 100 bases:
>100_bases GCATATGGCAAAAAGTCGATTAGCCGCATCTAGAAATAAAAAAAAGCTCATTACTCAACCAAAAGCGAAAGATAACGTTA CTTCATTAGATTTGAGTTTT
Product: MutL protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MIEQSEVFPEDYGIDYCLMWINTDKYPSFTSRAAPDSGEIIHEVNDNSKPFIYKLPILVDPDGINVVPVNLYLHSLLSNP DISSVDTIESHANALLSFYRWMSMEIPEHTDKRTGVLIEEKLPLTIFDCTEKVEESPVVRYRDYLLENLYTEDENGKIGG SPNTASSYVLKVVAYYTYLHRQRIVPLSKTFRPFEFSAKKVRIQNKNKRAQHDMLSHLNSYRGDITVYTTGLTKPFKNRQ KPQNADIRELRPLREDEKQAFYRYIDVENSSDTKDLMLYTATEVGVRLEELITFPASVVDRPKSKVMKVLIGERINGCLT KYRKERTIEIPDYVMDLLYEYKLSKARKEAIDSGLLRHNHLFVQSNGSIYAPNTIQKHVEAVRNDMILSGLDIYFVTHDL RATFATDWLYKRHIETGKPFEALISELAYLMGHENTGTTQKYINYLNDDKTWFEFSQRKNQFAQEVLR
Sequences:
>Translated_468_residues MIEQSEVFPEDYGIDYCLMWINTDKYPSFTSRAAPDSGEIIHEVNDNSKPFIYKLPILVDPDGINVVPVNLYLHSLLSNP DISSVDTIESHANALLSFYRWMSMEIPEHTDKRTGVLIEEKLPLTIFDCTEKVEESPVVRYRDYLLENLYTEDENGKIGG SPNTASSYVLKVVAYYTYLHRQRIVPLSKTFRPFEFSAKKVRIQNKNKRAQHDMLSHLNSYRGDITVYTTGLTKPFKNRQ KPQNADIRELRPLREDEKQAFYRYIDVENSSDTKDLMLYTATEVGVRLEELITFPASVVDRPKSKVMKVLIGERINGCLT KYRKERTIEIPDYVMDLLYEYKLSKARKEAIDSGLLRHNHLFVQSNGSIYAPNTIQKHVEAVRNDMILSGLDIYFVTHDL RATFATDWLYKRHIETGKPFEALISELAYLMGHENTGTTQKYINYLNDDKTWFEFSQRKNQFAQEVLR >Mature_468_residues MIEQSEVFPEDYGIDYCLMWINTDKYPSFTSRAAPDSGEIIHEVNDNSKPFIYKLPILVDPDGINVVPVNLYLHSLLSNP DISSVDTIESHANALLSFYRWMSMEIPEHTDKRTGVLIEEKLPLTIFDCTEKVEESPVVRYRDYLLENLYTEDENGKIGG SPNTASSYVLKVVAYYTYLHRQRIVPLSKTFRPFEFSAKKVRIQNKNKRAQHDMLSHLNSYRGDITVYTTGLTKPFKNRQ KPQNADIRELRPLREDEKQAFYRYIDVENSSDTKDLMLYTATEVGVRLEELITFPASVVDRPKSKVMKVLIGERINGCLT KYRKERTIEIPDYVMDLLYEYKLSKARKEAIDSGLLRHNHLFVQSNGSIYAPNTIQKHVEAVRNDMILSGLDIYFVTHDL RATFATDWLYKRHIETGKPFEALISELAYLMGHENTGTTQKYINYLNDDKTWFEFSQRKNQFAQEVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54443; Mature: 54443
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQSEVFPEDYGIDYCLMWINTDKYPSFTSRAAPDSGEIIHEVNDNSKPFIYKLPILVD CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCEEEC PDGINVVPVNLYLHSLLSNPDISSVDTIESHANALLSFYRWMSMEIPEHTDKRTGVLIEE CCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC KLPLTIFDCTEKVEESPVVRYRDYLLENLYTEDENGKIGGSPNTASSYVLKVVAYYTYLH CCCEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RQRIVPLSKTFRPFEFSAKKVRIQNKNKRAQHDMLSHLNSYRGDITVYTTGLTKPFKNRQ HHHCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCC KPQNADIRELRPLREDEKQAFYRYIDVENSSDTKDLMLYTATEVGVRLEELITFPASVVD CCCCCCHHHHCCCCHHHHHHHHHEEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHC RPKSKVMKVLIGERINGCLTKYRKERTIEIPDYVMDLLYEYKLSKARKEAIDSGLLRHNH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LFVQSNGSIYAPNTIQKHVEAVRNDMILSGLDIYFVTHDLRATFATDWLYKRHIETGKPF EEEECCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCH EALISELAYLMGHENTGTTQKYINYLNDDKTWFEFSQRKNQFAQEVLR HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIEQSEVFPEDYGIDYCLMWINTDKYPSFTSRAAPDSGEIIHEVNDNSKPFIYKLPILVD CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCEEEC PDGINVVPVNLYLHSLLSNPDISSVDTIESHANALLSFYRWMSMEIPEHTDKRTGVLIEE CCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC KLPLTIFDCTEKVEESPVVRYRDYLLENLYTEDENGKIGGSPNTASSYVLKVVAYYTYLH CCCEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RQRIVPLSKTFRPFEFSAKKVRIQNKNKRAQHDMLSHLNSYRGDITVYTTGLTKPFKNRQ HHHCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCC KPQNADIRELRPLREDEKQAFYRYIDVENSSDTKDLMLYTATEVGVRLEELITFPASVVD CCCCCCHHHHCCCCHHHHHHHHHEEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHC RPKSKVMKVLIGERINGCLTKYRKERTIEIPDYVMDLLYEYKLSKARKEAIDSGLLRHNH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE LFVQSNGSIYAPNTIQKHVEAVRNDMILSGLDIYFVTHDLRATFATDWLYKRHIETGKPF EEEECCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCH EALISELAYLMGHENTGTTQKYINYLNDDKTWFEFSQRKNQFAQEVLR HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA