Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678286

Identifier: 37678286

GI number: 37678286

Start: 113088

End: 114308

Strand: Direct

Name: 37678286

Synonym: VV0102

Alternate gene names: NA

Gene position: 113088-114308 (Clockwise)

Preceding gene: 37678285

Following gene: 37678287

Centisome position: 3.37

GC content: 51.02

Gene sequence:

>1221_bases
ATGATGATCGCTCAACTGAGCAAAAGTGTCCGCCAATACATGCTGGTCACGTTTAACTATTGGAACTTTACCTTAACCGA
TGGGGCACTGCGCATGCTGGTGGTGCTCTATTTCCACGACCTTGGCTACTCGGCGCTGGCGATTGCCTCGTTGTTTTTGT
TTTACGAGTTTTTTGGCGTGGTGACCAACCTGATTGGTGGATGGTTGGGGGCAAGGCTCGGGCTCAATAAGACCATGAAC
ATCGGCTTGGCCATGCAAATCATCGCGTTGTTGATGTTGGCAGTCCCCGCCGCTTGGCTGACGATTCCTTGGGTGATGGC
CGCGCAAGCACTTTCTGGTATTGCCAAAGATTTGAATAAGATGAGTGCCAAAAGTGCCATCAAAACCTTGGTACCGGACG
AGCAGCAAGGCGCATTGTTCAAGTGGGTGGCCATTCTGACGGGTTCGAAAAATGCCTTAAAAGGGGCGGGCTTTTTCCTC
GGTGGTCTCTTATTGGCTGTTCTCGGTTTTCAATACGCGGTACTCGTCATGGCGGGGGTACTCACCTTAGTGTTGATTGG
CAGTTTGCTTAGCCTAGAGTCGGAGATGGGCAAAGCGAAAAACAAGCCGAAGTTTAATGAGATTTTCTCCAAATCGGCGC
CTGTCAACATTCTTTCAGCTGCTCGCCTCTTCCTCTTTGGTGCACGAGATGTCTGGTTTGTGGTGGCACTGCCCGTTTAC
CTTGGCAGCGTATTTGGCTGGGATCATCTTTGGGTCGGAGGCTTTCTTGCCTTATGGGTCATGGGGTATGGCGTTGTGCA
AGGCATCGCGCCGCGCATTACAGGGAAAGCGCAAGGTCGGGTGCCGGATGGTCACAGTGCTTTTTACTGGGCCGCGTTAT
TGGCATTGCTAACAGGAGTCATTGCCTATGCGGTGCAACAAGCGTGGCATCCTCAGCAAGTGATCGTGATTGGCCTGTTG
CTATTTGGGGCGGTGTTTGCGATTAACTCTTCTCTTCACTCGTATCTGATTGTCAGTTATGCCAAAGGCGATGGCGTCTC
ATTGGATGTGGGTTTTTACTATATGGCTAATGCCATGGGCCGTTTGATCGGCACACTATTGTCGGGGTGGATCTATCAAG
AATTCGGTTTGGCAGCTTGCTTGTGGGTCTCTTGCTTCTTCTTGGCTTTGACGACGTTAATTTCAATCAAGCTCCCTCGC
TTTGCAGCGAAAACCGCCTGA

Upstream 100 bases:

>100_bases
TTGAGCTACATCGAATCTGTGGCAAACGCACAGTGAGCAGCCATTAGAGCTTTTGGATCATCGTGATCCAAAAGCTTGTT
AACCTGTACACAGAGGGCTA

Downstream 100 bases:

>100_bases
TCGCAGTGTGTGAATTCTAACCAAAAGCTGACGCATGATTTCATGCGTCAGCTTTTTTTATTGCTATAGTCAAAGCCATG
AAAAGCAAGAGGATAGAGAA

Product: putative transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MMIAQLSKSVRQYMLVTFNYWNFTLTDGALRMLVVLYFHDLGYSALAIASLFLFYEFFGVVTNLIGGWLGARLGLNKTMN
IGLAMQIIALLMLAVPAAWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPDEQQGALFKWVAILTGSKNALKGAGFFL
GGLLLAVLGFQYAVLVMAGVLTLVLIGSLLSLESEMGKAKNKPKFNEIFSKSAPVNILSAARLFLFGARDVWFVVALPVY
LGSVFGWDHLWVGGFLALWVMGYGVVQGIAPRITGKAQGRVPDGHSAFYWAALLALLTGVIAYAVQQAWHPQQVIVIGLL
LFGAVFAINSSLHSYLIVSYAKGDGVSLDVGFYYMANAMGRLIGTLLSGWIYQEFGLAACLWVSCFFLALTTLISIKLPR
FAAKTA

Sequences:

>Translated_406_residues
MMIAQLSKSVRQYMLVTFNYWNFTLTDGALRMLVVLYFHDLGYSALAIASLFLFYEFFGVVTNLIGGWLGARLGLNKTMN
IGLAMQIIALLMLAVPAAWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPDEQQGALFKWVAILTGSKNALKGAGFFL
GGLLLAVLGFQYAVLVMAGVLTLVLIGSLLSLESEMGKAKNKPKFNEIFSKSAPVNILSAARLFLFGARDVWFVVALPVY
LGSVFGWDHLWVGGFLALWVMGYGVVQGIAPRITGKAQGRVPDGHSAFYWAALLALLTGVIAYAVQQAWHPQQVIVIGLL
LFGAVFAINSSLHSYLIVSYAKGDGVSLDVGFYYMANAMGRLIGTLLSGWIYQEFGLAACLWVSCFFLALTTLISIKLPR
FAAKTA
>Mature_406_residues
MMIAQLSKSVRQYMLVTFNYWNFTLTDGALRMLVVLYFHDLGYSALAIASLFLFYEFFGVVTNLIGGWLGARLGLNKTMN
IGLAMQIIALLMLAVPAAWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPDEQQGALFKWVAILTGSKNALKGAGFFL
GGLLLAVLGFQYAVLVMAGVLTLVLIGSLLSLESEMGKAKNKPKFNEIFSKSAPVNILSAARLFLFGARDVWFVVALPVY
LGSVFGWDHLWVGGFLALWVMGYGVVQGIAPRITGKAQGRVPDGHSAFYWAALLALLTGVIAYAVQQAWHPQQVIVIGLL
LFGAVFAINSSLHSYLIVSYAKGDGVSLDVGFYYMANAMGRLIGTLLSGWIYQEFGLAACLWVSCFFLALTTLISIKLPR
FAAKTA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44041; Mature: 44041

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIAQLSKSVRQYMLVTFNYWNFTLTDGALRMLVVLYFHDLGYSALAIASLFLFYEFFGV
CCHHHHHHHHHHHHHHEEECCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VTNLIGGWLGARLGLNKTMNIGLAMQIIALLMLAVPAAWLTIPWVMAAQALSGIAKDLNK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSAKSAIKTLVPDEQQGALFKWVAILTGSKNALKGAGFFLGGLLLAVLGFQYAVLVMAGV
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLVLIGSLLSLESEMGKAKNKPKFNEIFSKSAPVNILSAARLFLFGARDVWFVVALPVY
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
LGSVFGWDHLWVGGFLALWVMGYGVVQGIAPRITGKAQGRVPDGHSAFYWAALLALLTGV
HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IAYAVQQAWHPQQVIVIGLLLFGAVFAINSSLHSYLIVSYAKGDGVSLDVGFYYMANAMG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHHHH
RLIGTLLSGWIYQEFGLAACLWVSCFFLALTTLISIKLPRFAAKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MMIAQLSKSVRQYMLVTFNYWNFTLTDGALRMLVVLYFHDLGYSALAIASLFLFYEFFGV
CCHHHHHHHHHHHHHHEEECCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VTNLIGGWLGARLGLNKTMNIGLAMQIIALLMLAVPAAWLTIPWVMAAQALSGIAKDLNK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSAKSAIKTLVPDEQQGALFKWVAILTGSKNALKGAGFFLGGLLLAVLGFQYAVLVMAGV
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLVLIGSLLSLESEMGKAKNKPKFNEIFSKSAPVNILSAARLFLFGARDVWFVVALPVY
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
LGSVFGWDHLWVGGFLALWVMGYGVVQGIAPRITGKAQGRVPDGHSAFYWAALLALLTGV
HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IAYAVQQAWHPQQVIVIGLLLFGAVFAINSSLHSYLIVSYAKGDGVSLDVGFYYMANAMG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHHHH
RLIGTLLSGWIYQEFGLAACLWVSCFFLALTTLISIKLPRFAAKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA