Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is yiaH [C]

Identifier: 37678287

GI number: 37678287

Start: 114408

End: 115421

Strand: Direct

Name: yiaH [C]

Synonym: VV0103

Alternate gene names: 37678287

Gene position: 114408-115421 (Clockwise)

Preceding gene: 37678286

Following gene: 37678289

Centisome position: 3.41

GC content: 50.69

Gene sequence:

>1014_bases
ATGCGCGAAAGAGTTCAGTTTTTTGATTTGCTACGATGTGTCGCGGCGGTGGCCGTGATCGCCATTCATGTGCTTGCGCC
TTATCGTCATGAGTTAGGGGTGATTCCTTTTGATCAATGGGTGACGGCCGTTGGCATCAATGGTATTTCTCGTTGGGCGG
TACCGGTTTTTATTCTTATCACTGGCGCCCTGATGCTCAGTGACACTCGGCCATTTGATCTGCCTTATTATGCTCGTCGT
CGTTTAGGTAAGGTGCTGATCCCTTTTCTCTTTTGGTCGTTGTTCTATGCGCTCCTCTCCGGCTTGAGTGCGAGCGGTTT
TGATAGCAGCAAAGTGACAGAAGTGCTCAGCAACAGCCCAGAGCATGCCACCTATTACCATCTTGGTTTCTTCTATTATT
TTATTCCGCTCTATTTTGTGATTCCGATGTTCCAGTGGCTTGTTCGCCAGCAACGTCAGGACATCCTCTATCTCTTTACC
GCGTTATGGTTGTTCACCACTGTGTTGTATCTGGCGGGCATCGATGGCCCTTGGAGCTACGAGCTATGGCTGTACAGTGG
CTACCTTCCTCTTGGCTATCTGCTCTTTAGCAAAGTCCCGAATCAACGCTCAGTGGTCGTTGGGTCGGTGCTGCTGGGGG
GAATGGCATTGGCTGCCACGGTTATCATGGTGGTGAGTAATAGCCTTGCTGCAGGGGAATACACCGTCGGGCGTTGGTTG
TCGTATAAAACCATTAATGTGGTATTGGCCGCGTCGATGGTGTTTGTGCTGTGTCGCTCTGTGGGCGAGCGGTTGTCGGC
TCAATGGCAAAAGTGGGTGGCGTTAATCAGCCGCCACAGTTTAGGCATCTATTTATTGCATCCTATTTTTCTATGGCCAA
TGAAAGAGTTGGGCTGGTATCAGGGTCATCCTGCGTGGGTCATCCCGTTATGGGTCGTGCTGAGTGGGGCGGGTGCCTTA
GCGTTGAGTTATCTATTTTCGCTCTCCGCTAAGACACGTTGGTTATTGCCTTAG

Upstream 100 bases:

>100_bases
ATCGCAGTGTGTGAATTCTAACCAAAAGCTGACGCATGATTTCATGCGTCAGCTTTTTTTATTGCTATAGTCAAAGCCAT
GAAAAGCAAGAGGATAGAGA

Downstream 100 bases:

>100_bases
CGCTTCAGGGCAAAGTGGAGAAACTTATCGCCCTTGTAGGTGAGTTCCCCTTTATCGCCGGGGTTAAGAGCGTGGAAATA
GTGTACCCCAACCTGAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILITGALMLSDTRPFDLPYYARR
RLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSPEHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFT
ALWLFTTVLYLAGIDGPWSYELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL
SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWYQGHPAWVIPLWVVLSGAGAL
ALSYLFSLSAKTRWLLP

Sequences:

>Translated_337_residues
MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILITGALMLSDTRPFDLPYYARR
RLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSPEHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFT
ALWLFTTVLYLAGIDGPWSYELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL
SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWYQGHPAWVIPLWVVLSGAGAL
ALSYLFSLSAKTRWLLP
>Mature_337_residues
MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILITGALMLSDTRPFDLPYYARR
RLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSPEHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFT
ALWLFTTVLYLAGIDGPWSYELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL
SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWYQGHPAWVIPLWVVLSGAGAL
ALSYLFSLSAKTRWLLP

Specific function: Unknown

COG id: COG3274

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38269; Mature: 38269

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILI
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
TGALMLSDTRPFDLPYYARRRLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
EHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFTALWLFTTVLYLAGIDGPWSY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL
EEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
QGHPAWVIPLWVVLSGAGALALSYLFSLSAKTRWLLP
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILI
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
TGALMLSDTRPFDLPYYARRRLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
EHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFTALWLFTTVLYLAGIDGPWSY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL
EEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
QGHPAWVIPLWVVLSGAGALALSYLFSLSAKTRWLLP
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA