| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678247
Identifier: 37678247
GI number: 37678247
Start: 74322
End: 74819
Strand: Direct
Name: 37678247
Synonym: VV0063
Alternate gene names: NA
Gene position: 74322-74819 (Clockwise)
Preceding gene: 37678246
Following gene: 37678248
Centisome position: 2.22
GC content: 39.76
Gene sequence:
>498_bases ATGATAAGAACAGATCCCAATGGAACATCAAATAAAAAGATAAATTTAGCATTGAACAGAATAGTTAGTATAGAAAGCCA ATGTGTTCCTATCCTAACTAATGCTTCTTTTCCATTGGAACAAGTGCCAACAGAGATCTATACCGTTGCTCCTAGAAGTT TTGGTTCTAATCGAGGTGCTAGGAAGTATGCTGGCTGTGACTTGTACGCTAAAGAGGGTAGTCGAGTCTTTGCAATGGCG GATGGTGAGATATCTGGTCGATTGGCTGATGGGGTATCTATTGGAGCCAAGATTCAACAAGGACAACATATTGCCTATGT TGGGAAAGTGGTCTTAAAAAGCGGGTGGACAGGTGAAATGCTGCATTTAGAGATCTATGATGGAAGTGCTACTGGTATTT TAAGAGCTCCTTTATCAGAAAGCCCTTACCAAAGAAGGAAAGATCTCATAAACCCAACGGATATTTTTAATATGGCTCAA AAAAGGTTACCAAGCTAA
Upstream 100 bases:
>100_bases TTAAAATACAACCGTTGAAAGTCGATGGAAGTTTGGTACGTAAGCCTGAAAAATCTAAAAATATTATTCAAATTAATAAT GTTCAAAACATATTGTTAAT
Downstream 100 bases:
>100_bases TGAAGTTAGTATTTTTTCTGTGTGGTTTTGCATTGTGTTTTAGCCAAGCATCTTTTTCTAAAGATAACTTTCTGAGAAAT GAATACAACTTGGGTGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MIRTDPNGTSNKKINLALNRIVSIESQCVPILTNASFPLEQVPTEIYTVAPRSFGSNRGARKYAGCDLYAKEGSRVFAMA DGEISGRLADGVSIGAKIQQGQHIAYVGKVVLKSGWTGEMLHLEIYDGSATGILRAPLSESPYQRRKDLINPTDIFNMAQ KRLPS
Sequences:
>Translated_165_residues MIRTDPNGTSNKKINLALNRIVSIESQCVPILTNASFPLEQVPTEIYTVAPRSFGSNRGARKYAGCDLYAKEGSRVFAMA DGEISGRLADGVSIGAKIQQGQHIAYVGKVVLKSGWTGEMLHLEIYDGSATGILRAPLSESPYQRRKDLINPTDIFNMAQ KRLPS >Mature_165_residues MIRTDPNGTSNKKINLALNRIVSIESQCVPILTNASFPLEQVPTEIYTVAPRSFGSNRGARKYAGCDLYAKEGSRVFAMA DGEISGRLADGVSIGAKIQQGQHIAYVGKVVLKSGWTGEMLHLEIYDGSATGILRAPLSESPYQRRKDLINPTDIFNMAQ KRLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17998; Mature: 17998
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTDPNGTSNKKINLALNRIVSIESQCVPILTNASFPLEQVPTEIYTVAPRSFGSNRGA CCCCCCCCCCCCEEEEEEEEHHHCCCCCEEEEECCCCCHHHCCCEEEEECCCCCCCCCCC RKYAGCDLYAKEGSRVFAMADGEISGRLADGVSIGAKIQQGQHIAYVGKVVLKSGWTGEM CCCCCCEEEECCCCEEEEEECCCCCCEEECCEEECEEECCCCEEHHHHHHHHCCCCCCCE LHLEIYDGSATGILRAPLSESPYQRRKDLINPTDIFNMAQKRLPS EEEEEECCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MIRTDPNGTSNKKINLALNRIVSIESQCVPILTNASFPLEQVPTEIYTVAPRSFGSNRGA CCCCCCCCCCCCEEEEEEEEHHHCCCCCEEEEECCCCCHHHCCCEEEEECCCCCCCCCCC RKYAGCDLYAKEGSRVFAMADGEISGRLADGVSIGAKIQQGQHIAYVGKVVLKSGWTGEM CCCCCCEEEECCCCEEEEEECCCCCCEEECCEEECEEECCCCEEHHHHHHHHCCCCCCCE LHLEIYDGSATGILRAPLSESPYQRRKDLINPTDIFNMAQKRLPS EEEEEECCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA