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The map label for this gene is hemG

Identifier: 37678217

GI number: 37678217

Start: 31755

End: 32285

Strand: Direct

Name: hemG

Synonym: VV0033

Alternate gene names: 37678217

Gene position: 31755-32285 (Clockwise)

Preceding gene: 37678216

Following gene: 37678219

Centisome position: 0.95

GC content: 41.24

Gene sequence:

>531_bases
ATGATAGTGAAAGCCCTATTTCTTTATTCTTCCCGTGAGGGGCAGACCAAGAAAATCCTTCAATATATAGAAGAACAGTT
ACCGAGCTATCAATGTGATGTGAAGAATCTACATGACATCGATACGGTGGATTTTTCTGTTTATGACAAAGTGCTGATTG
GCGCGTCGATTCGCTATGGTCATTTGAATCAGAAGCTCTATCAATTTATCCAGCATAACCTAACTCAGTTGAATGAACAT
AAAGTGGCATTCTTTTGTGTCAACCTAACCGCAAGAAAAGAAGAGCAAGGGAAAGATACGCCAGAGGGAAGCGCTTATAT
TCGAACATTTCTTAAAAAGTCTCCTTGGCAGCCTAACCTAATCGGCGTTTTCGCTGGTGCGCTCTATTACCCCAGATATA
ACTGGTTTGATAGAAATATGATCAAACTCATCATGACATTAACTGGCGGAGAGACGGACACCAGTAAAGAAGTGGAGTAC
ACCAACTGGAAGAAAGTACGCCAATTCTCTGAGAAGTTTGCTCGTTTGTAG

Upstream 100 bases:

>100_bases
AGCCAAATGGGTTTTGGTGGTGTCTATGCTCTTTGGTCGTTTAGAAATCTTTACCTTACTTATATTGCTAACCCCTACGT
TTTGGCGCAGTTAAGGAGAA

Downstream 100 bases:

>100_bases
AAATAACTTGCACTTTTTGCTTGTTTTGACTCTTTTTTAAACGAACGATAGAAAAATCAAAAAAAACGTAAAAAAGGGCT
TGCCAACGTGACGCCGATCT

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MIVKALFLYSSREGQTKKILQYIEEQLPSYQCDVKNLHDIDTVDFSVYDKVLIGASIRYGHLNQKLYQFIQHNLTQLNEH
KVAFFCVNLTARKEEQGKDTPEGSAYIRTFLKKSPWQPNLIGVFAGALYYPRYNWFDRNMIKLIMTLTGGETDTSKEVEY
TNWKKVRQFSEKFARL

Sequences:

>Translated_176_residues
MIVKALFLYSSREGQTKKILQYIEEQLPSYQCDVKNLHDIDTVDFSVYDKVLIGASIRYGHLNQKLYQFIQHNLTQLNEH
KVAFFCVNLTARKEEQGKDTPEGSAYIRTFLKKSPWQPNLIGVFAGALYYPRYNWFDRNMIKLIMTLTGGETDTSKEVEY
TNWKKVRQFSEKFARL
>Mature_176_residues
MIVKALFLYSSREGQTKKILQYIEEQLPSYQCDVKNLHDIDTVDFSVYDKVLIGASIRYGHLNQKLYQFIQHNLTQLNEH
KVAFFCVNLTARKEEQGKDTPEGSAYIRTFLKKSPWQPNLIGVFAGALYYPRYNWFDRNMIKLIMTLTGGETDTSKEVEY
TNWKKVRQFSEKFARL

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=176, Percent_Identity=48.8636363636364, Blast_Score=178, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: NA

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 20693; Mature: 20693

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKALFLYSSREGQTKKILQYIEEQLPSYQCDVKNLHDIDTVDFSVYDKVLIGASIRYG
CCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
HLNQKLYQFIQHNLTQLNEHKVAFFCVNLTARKEEQGKDTPEGSAYIRTFLKKSPWQPNL
HHHHHHHHHHHHHHHHHCCCEEEEEEEECHHCCHHCCCCCCCHHHHHHHHHHCCCCCCCH
IGVFAGALYYPRYNWFDRNMIKLIMTLTGGETDTSKEVEYTNWKKVRQFSEKFARL
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVKALFLYSSREGQTKKILQYIEEQLPSYQCDVKNLHDIDTVDFSVYDKVLIGASIRYG
CCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
HLNQKLYQFIQHNLTQLNEHKVAFFCVNLTARKEEQGKDTPEGSAYIRTFLKKSPWQPNL
HHHHHHHHHHHHHHHHHCCCEEEEEEEECHHCCHHCCCCCCCHHHHHHHHHHCCCCCCCH
IGVFAGALYYPRYNWFDRNMIKLIMTLTGGETDTSKEVEYTNWKKVRQFSEKFARL
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]