| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ilvC [H]
Identifier: 37678219
GI number: 37678219
Start: 39308
End: 40792
Strand: Direct
Name: ilvC [H]
Synonym: VV0035
Alternate gene names: 37678219
Gene position: 39308-40792 (Clockwise)
Preceding gene: 37678217
Following gene: 37678224
Centisome position: 1.17
GC content: 46.46
Gene sequence:
>1485_bases ATGGCGAACTATTTCAATACTTTGAACCTTCGTGAGCAACTAGACCAATTGGGTCGTTGTCGTTTTATGGATCGCAGTGA ATTCGCTACAGAGGCGGATTACCTTAAGGGTAAAAAAGTCGTCATCGTAGGTTGTGGTGCGCAAGGCCTAAACCAAGGTC TAAACATGCGTGACTCAGGTCTTGATGTTGCTTACGCACTACGTCAAGCCGCGATTGATGAGCAGCGTCAATCATACAAA AATGCTAAAGAGAACGGTTTTGAAGTGGGTAGTTATGAAACGCTGATCCCTCAAGCTGATCTTGTTGTTAACTTGACACC AGATAAACAGCACACCAATGTGGTTGAAACCGTAATGCCCCTAATGAAAGAAGGCGCGGCTCTTGGCTACTCACACGGTT TTAACGTTGTTGAAGAAGGCATGCAAATCCGTAAAGATCTAACGGTTGTTATGGTGGCGCCTAAGTGTCCCGGTACAGAA GTTCGTGAAGAATACAAACGTGGCTTTGGTGTTCCTACATTGATTGCTGTTCACCCAGAGAACGATCCAAAAGGTGAGGG TTGGGACATTGCGAAAGCTTGGGCGGCTGCGACTGGTGGTCATCGTGCGGGTTGTCTTGAGTCTTCTTTTGTTGCTGAAG TGAAATCAGACTTGATGGGTGAGCAAACCATTCTATGTGGCATGCTTCAAGCTGGTTCTATCGTATGTTACGAGAAGATG GTTGCGGAAGGTATTGACCCAGGTTACGCAGGTAAGTTACTGCAGTACGGTTGGGAAACCATTACCGAAGCACTGAAGTT CGGTGGTATCACACATATGATGGACCGTCTATCAAACCCAGCGAAGATCAAAGCATTTGAGCTTTCTGAAGAGCTAAAGG ATCTGATGCGTCCTCTGTACAACAAACACATGGACGACATTATCTCAGGTCACTTCTCTAGCACTATGATGGCTGACTGG GCGAATGATGATGCGAATCTGCTAGGCTGGCGCGCTGAAACGGGTGAAACGGCGTTCGAAAATTACCCATCAACGGATGT TGAAATCTCTGAGCAAGAGTACTTTGACAACGGTATCTTAATGGTTGCAATGGTTCGTGCTGGCGTTGAACTGGCGTTTG AAGCAATGACGGCCTCTGGCATTATTGACGAATCGGCTTACTACGAGTCGCTGCATGAGTTACCACTTATTGCCAACACA ATTGCACGTAAGCGTCTATACGAGATGAACGTGGTTATCTCAGACACAGCGGAATATGGTAACTACCTGTTTGCTAATGT GGCAACACCGCTACTTCGTGAGAAGTTTATGCCTTCGGTAGGGACAGATGTGATTGGTAAGGGGTTAGGTGAAACTTCTA ATCAAGTTGATAACGCGACACTCATTGCCGTAAATGAGACTATCCGCAATCACCCTGTTGAGTACATCGGTGAAGAGCTG CGTGGTTACATGACTGACATGAAACGTATCGCTGTTGGTGGCTAA
Upstream 100 bases:
>100_bases TGTGAATATATCACTTTGAGCAACTTAAAGTCTGTTTTAGTATGAATTCATTCGGTGAGTAACCACCGACCGTGATGGAT GAATTTTAAGGAGAGCCCTG
Downstream 100 bases:
>100_bases GTATCGCCTTTCCACCTATTCTCATTCTAGTGTCTAGAAAAGGGCGCTAACAAAACTCCAGGCAGACTGGGGTGATAAAT ACAAAAGAAAACACAACATG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MANYFNTLNLREQLDQLGRCRFMDRSEFATEADYLKGKKVVIVGCGAQGLNQGLNMRDSGLDVAYALRQAAIDEQRQSYK NAKENGFEVGSYETLIPQADLVVNLTPDKQHTNVVETVMPLMKEGAALGYSHGFNVVEEGMQIRKDLTVVMVAPKCPGTE VREEYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAATGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVCYEKM VAEGIDPGYAGKLLQYGWETITEALKFGGITHMMDRLSNPAKIKAFELSEELKDLMRPLYNKHMDDIISGHFSSTMMADW ANDDANLLGWRAETGETAFENYPSTDVEISEQEYFDNGILMVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANT IARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPSVGTDVIGKGLGETSNQVDNATLIAVNETIRNHPVEYIGEEL RGYMTDMKRIAVGG
Sequences:
>Translated_494_residues MANYFNTLNLREQLDQLGRCRFMDRSEFATEADYLKGKKVVIVGCGAQGLNQGLNMRDSGLDVAYALRQAAIDEQRQSYK NAKENGFEVGSYETLIPQADLVVNLTPDKQHTNVVETVMPLMKEGAALGYSHGFNVVEEGMQIRKDLTVVMVAPKCPGTE VREEYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAATGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVCYEKM VAEGIDPGYAGKLLQYGWETITEALKFGGITHMMDRLSNPAKIKAFELSEELKDLMRPLYNKHMDDIISGHFSSTMMADW ANDDANLLGWRAETGETAFENYPSTDVEISEQEYFDNGILMVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANT IARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPSVGTDVIGKGLGETSNQVDNATLIAVNETIRNHPVEYIGEEL RGYMTDMKRIAVGG >Mature_493_residues ANYFNTLNLREQLDQLGRCRFMDRSEFATEADYLKGKKVVIVGCGAQGLNQGLNMRDSGLDVAYALRQAAIDEQRQSYKN AKENGFEVGSYETLIPQADLVVNLTPDKQHTNVVETVMPLMKEGAALGYSHGFNVVEEGMQIRKDLTVVMVAPKCPGTEV REEYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAATGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVCYEKMV AEGIDPGYAGKLLQYGWETITEALKFGGITHMMDRLSNPAKIKAFELSEELKDLMRPLYNKHMDDIISGHFSSTMMADWA NDDANLLGWRAETGETAFENYPSTDVEISEQEYFDNGILMVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTI ARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPSVGTDVIGKGLGETSNQVDNATLIAVNETIRNHPVEYIGEELR GYMTDMKRIAVGG
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=494, Percent_Identity=76.1133603238866, Blast_Score=765, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323387, Length=287, Percent_Identity=29.9651567944251, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - InterPro: IPR014359 - InterPro: IPR016040 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 54541; Mature: 54409
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYFNTLNLREQLDQLGRCRFMDRSEFATEADYLKGKKVVIVGCGAQGLNQGLNMRDSG CCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCC LDVAYALRQAAIDEQRQSYKNAKENGFEVGSYETLIPQADLVVNLTPDKQHTNVVETVMP CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHH LMKEGAALGYSHGFNVVEEGMQIRKDLTVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE HHHCCCCCCHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCC NDPKGEGWDIAKAWAAATGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVCYEKM CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH VAEGIDPGYAGKLLQYGWETITEALKFGGITHMMDRLSNPAKIKAFELSEELKDLMRPLY HHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH NKHMDDIISGHFSSTMMADWANDDANLLGWRAETGETAFENYPSTDVEISEQEYFDNGIL HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCCCCEECHHHHHCCCHH MVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCHHHC NYLFANVATPLLREKFMPSVGTDVIGKGLGETSNQVDNATLIAVNETIRNHPVEYIGEEL CEEHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCHHHHCCHHHHHHHH RGYMTDMKRIAVGG HHHHHHHHHHHCCC >Mature Secondary Structure ANYFNTLNLREQLDQLGRCRFMDRSEFATEADYLKGKKVVIVGCGAQGLNQGLNMRDSG CCCHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCC LDVAYALRQAAIDEQRQSYKNAKENGFEVGSYETLIPQADLVVNLTPDKQHTNVVETVMP CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHH LMKEGAALGYSHGFNVVEEGMQIRKDLTVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE HHHCCCCCCHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCC NDPKGEGWDIAKAWAAATGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVCYEKM CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH VAEGIDPGYAGKLLQYGWETITEALKFGGITHMMDRLSNPAKIKAFELSEELKDLMRPLY HHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH NKHMDDIISGHFSSTMMADWANDDANLLGWRAETGETAFENYPSTDVEISEQEYFDNGIL HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCCCCEECHHHHHCCCHH MVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCHHHC NYLFANVATPLLREKFMPSVGTDVIGKGLGETSNQVDNATLIAVNETIRNHPVEYIGEEL CEEHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCHHHHCCHHHHHHHH RGYMTDMKRIAVGG HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA