| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678203
Identifier: 37678203
GI number: 37678203
Start: 18206
End: 18568
Strand: Direct
Name: 37678203
Synonym: VV0019
Alternate gene names: NA
Gene position: 18206-18568 (Clockwise)
Preceding gene: 37678201
Following gene: 37678206
Centisome position: 0.54
GC content: 45.18
Gene sequence:
>363_bases ATGAAAATGAGAAAGTGCTTATTATTGACCATGTTGGCAGGCTTAACCGCGTGTAACACAATGAACTATCAAGCCAGTGC ACCAACAGCAGCCCCTGAGCTGGTGGCAGTATTACAAGATGAACTAAAAGAGATCCAAGATTTAAAAGTCACCGATGAAG GCTATATTGATTACTACGTTTGGGTGCCAGAAGGTTATCAATGGGATACCCACGCAATTAAGAAAGGTGGGTACGAGTGG GCATGTGAAGATATGATCAACGCTTTGCGCCAAGGCTTTGTCGTTCGCATGGGATTCAAAGGGAAAGGTGGTCGTGAAGA GCATTATGACTTTGCTCGCTGCGAACAAGAGGCCACCAACTAA
Upstream 100 bases:
>100_bases CCATATAACATTTTGATAAATTAGAACGCCATATGGCTTTGTTATTATGCTTACTGTGAATGTATTATGCGTGCGCATTA CATAACTAAATGGAATTACA
Downstream 100 bases:
>100_bases GCCGTTTGGATGCCGAGAAACAAAAAAGGGAAGCCGATGCTTCCCTTTTGCTTATCTCTTAATCACTTCGAAGCGTAATT CATTACTTTTGAAGCAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKMRKCLLLTMLAGLTACNTMNYQASAPTAAPELVAVLQDELKEIQDLKVTDEGYIDYYVWVPEGYQWDTHAIKKGGYEW ACEDMINALRQGFVVRMGFKGKGGREEHYDFARCEQEATN
Sequences:
>Translated_120_residues MKMRKCLLLTMLAGLTACNTMNYQASAPTAAPELVAVLQDELKEIQDLKVTDEGYIDYYVWVPEGYQWDTHAIKKGGYEW ACEDMINALRQGFVVRMGFKGKGGREEHYDFARCEQEATN >Mature_120_residues MKMRKCLLLTMLAGLTACNTMNYQASAPTAAPELVAVLQDELKEIQDLKVTDEGYIDYYVWVPEGYQWDTHAIKKGGYEW ACEDMINALRQGFVVRMGFKGKGGREEHYDFARCEQEATN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13680; Mature: 13680
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMRKCLLLTMLAGLTACNTMNYQASAPTAAPELVAVLQDELKEIQDLKVTDEGYIDYYV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE WVPEGYQWDTHAIKKGGYEWACEDMINALRQGFVVRMGFKGKGGREEHYDFARCEQEATN ECCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MKMRKCLLLTMLAGLTACNTMNYQASAPTAAPELVAVLQDELKEIQDLKVTDEGYIDYYV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE WVPEGYQWDTHAIKKGGYEWACEDMINALRQGFVVRMGFKGKGGREEHYDFARCEQEATN ECCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA