Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37678206

Identifier: 37678206

GI number: 37678206

Start: 22144

End: 22698

Strand: Direct

Name: 37678206

Synonym: VV0022

Alternate gene names: NA

Gene position: 22144-22698 (Clockwise)

Preceding gene: 37678203

Following gene: 37678207

Centisome position: 0.66

GC content: 50.99

Gene sequence:

>555_bases
GTGAGCGTTTTAGCTATTTCAATTACTACTGTCGCCTTGGCCGAAATTGGCGATAAAACCCAATTGTTGTCTCTGCTGTT
AGCCAGCCGTTACCGCAAACCAATCCCAATCATTGCTGCGATCTTTTTCGCGACGATTGCTAACCATGCCCTTGCAGCCT
GGCTGGGTGTGGTGGTGGCCGATTATCTTTCTCCCGACGTGTTGAAGTGGGTGGTGGTGGCCAGTTTCTTAGCCATGGCG
GGATGGGTGTTGATTCCCGATAAGTTGGATGACGAAGAAGAGATCTCAAACCGTGGCCCTTTTGTGGCCAGCTTTATTGC
TTTCTTTATCGCTGAGATTGGCGATAAAACGCAGATCGCAACGTCCATTCTCGGGGCTCAGTATGCGGATGCACTGACTT
GGGTCGTGTTAGGAACCACCATTGGCATGTTGCTGGCCAATGCCCCTGTGGTGCTGATTGGGAAACTGTCAGCAGATAAA
CTGCCACTGGCGTTAATCCGCAAAGTCACAGCGGCTCTGTTTGTCGCGTTAGCGGCCGGTGCAGCTTTATTTTAA

Upstream 100 bases:

>100_bases
CTTTCAAGTTTAGCAAGACCTTAGACAAACAACACGAACCGGGGTGGGGCGTGGGGTTTGTCTATGGTTACTATAATTAT
CCCGCCCCAATGAGCATGTC

Downstream 100 bases:

>100_bases
AGCGCGATGTCTAGCCAGAAAATAGAGATAAATATCAGTTAAATAACAGCCTATTATCTGATTGTTAGAGCCATCTTGCT
GTAGCGTGACCTCGGACATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVADYLSPDVLKWVVVASFLAMA
GWVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIATSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADK
LPLALIRKVTAALFVALAAGAALF

Sequences:

>Translated_184_residues
MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVADYLSPDVLKWVVVASFLAMA
GWVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIATSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADK
LPLALIRKVTAALFVALAAGAALF
>Mature_183_residues
SVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVADYLSPDVLKWVVVASFLAMAG
WVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIATSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADKL
PLALIRKVTAALFVALAAGAALF

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19421; Mature: 19290

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVA
CCEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLSPDVLKWVVVASFLAMAGWVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIA
HHHCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
TSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADKLPLALIRKVTAALFVALAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
AALF
HHCC
>Mature Secondary Structure 
SVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVA
CEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLSPDVLKWVVVASFLAMAGWVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIA
HHHCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
TSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADKLPLALIRKVTAALFVALAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
AALF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA