| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678206
Identifier: 37678206
GI number: 37678206
Start: 22144
End: 22698
Strand: Direct
Name: 37678206
Synonym: VV0022
Alternate gene names: NA
Gene position: 22144-22698 (Clockwise)
Preceding gene: 37678203
Following gene: 37678207
Centisome position: 0.66
GC content: 50.99
Gene sequence:
>555_bases GTGAGCGTTTTAGCTATTTCAATTACTACTGTCGCCTTGGCCGAAATTGGCGATAAAACCCAATTGTTGTCTCTGCTGTT AGCCAGCCGTTACCGCAAACCAATCCCAATCATTGCTGCGATCTTTTTCGCGACGATTGCTAACCATGCCCTTGCAGCCT GGCTGGGTGTGGTGGTGGCCGATTATCTTTCTCCCGACGTGTTGAAGTGGGTGGTGGTGGCCAGTTTCTTAGCCATGGCG GGATGGGTGTTGATTCCCGATAAGTTGGATGACGAAGAAGAGATCTCAAACCGTGGCCCTTTTGTGGCCAGCTTTATTGC TTTCTTTATCGCTGAGATTGGCGATAAAACGCAGATCGCAACGTCCATTCTCGGGGCTCAGTATGCGGATGCACTGACTT GGGTCGTGTTAGGAACCACCATTGGCATGTTGCTGGCCAATGCCCCTGTGGTGCTGATTGGGAAACTGTCAGCAGATAAA CTGCCACTGGCGTTAATCCGCAAAGTCACAGCGGCTCTGTTTGTCGCGTTAGCGGCCGGTGCAGCTTTATTTTAA
Upstream 100 bases:
>100_bases CTTTCAAGTTTAGCAAGACCTTAGACAAACAACACGAACCGGGGTGGGGCGTGGGGTTTGTCTATGGTTACTATAATTAT CCCGCCCCAATGAGCATGTC
Downstream 100 bases:
>100_bases AGCGCGATGTCTAGCCAGAAAATAGAGATAAATATCAGTTAAATAACAGCCTATTATCTGATTGTTAGAGCCATCTTGCT GTAGCGTGACCTCGGACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVADYLSPDVLKWVVVASFLAMA GWVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIATSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADK LPLALIRKVTAALFVALAAGAALF
Sequences:
>Translated_184_residues MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVADYLSPDVLKWVVVASFLAMA GWVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIATSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADK LPLALIRKVTAALFVALAAGAALF >Mature_183_residues SVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVADYLSPDVLKWVVVASFLAMAG WVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIATSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADKL PLALIRKVTAALFVALAAGAALF
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19421; Mature: 19290
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVA CCEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DYLSPDVLKWVVVASFLAMAGWVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIA HHHCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHH TSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADKLPLALIRKVTAALFVALAAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH AALF HHCC >Mature Secondary Structure SVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFFATIANHALAAWLGVVVA CEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DYLSPDVLKWVVVASFLAMAGWVLIPDKLDDEEEISNRGPFVASFIAFFIAEIGDKTQIA HHHCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHH TSILGAQYADALTWVVLGTTIGMLLANAPVVLIGKLSADKLPLALIRKVTAALFVALAAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH AALF HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA