| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is engA
Identifier: 161486654
GI number: 161486654
Start: 774843
End: 776333
Strand: Direct
Name: engA
Synonym: VV0770
Alternate gene names: 161486654
Gene position: 774843-776333 (Clockwise)
Preceding gene: 37678953
Following gene: 37678955
Centisome position: 23.1
GC content: 47.75
Gene sequence:
>1491_bases ATGATACCTGTTGTTGCTCTAGTCGGTCGTCCAAACGTAGGTAAATCTACGTTGTTTAACCGATTGACTCGCTCTCGTGA CGCATTGGTGGCGGACTTTCCAGGTCTGACTCGTGACCGTAAATATGGTCAAGCCAAAGTAGGTGAGCACGACTTTATTG TGATTGATACGGGTGGTATCGATGGTTCTGAAGAAGGCGTTGAAACCAAAATGGCAGAACAGTCACTTGCTGCGATCCGC GAAGCTGACGTTGTGTTGTTCATGGTGGATGGTCGCGCAGGATTGACGCCATCCGATGAGGCGATTGCTGCCCATTTACG TAAAATCGAAAAAGCCACCATGCTGGTGGTGAACAAAGTGGATGGCATCGATGCGGATGCTGCCAGCGCAGACTTTTGGC AACTGGGCGTTGATGAGATGTACCAAATTGCCGCAGCGCATGGTCGTGGTGTGACTGCGCTGATTGAACGTGCACTCGAT CCATTCTTTGACAATCTTCTCAGTACTAACAGCGAAGGTGAGATCGAAGATCTGACCAATATGGAAGATGAAGAAGCAGA ACAGCAAGAGTACTCTGAAGAAGATGCCGAAGAGTCACTGAAGCGACTGCAAGACCAGCCAATTAAGCTTGCTATTATTG GTCGTCCGAACGTGGGTAAATCAACGCTGACTAACCGTATTTTGGGTGAAGAACGCGTTGTTGTGTACGATATGCCAGGA ACCACGCGTGACTCCATTTACATTCCAATGGAACGTGATGGTCGCGAATACGTGTTGATCGACACCGCAGGTGTTCGTCG TCGCGGTAAAGTACATGAAACGGTTGAAAAATTCTCTGTTGTTAAAACATTGAAAGCCGTTGAAGATGCCAACGTTGTAC TGTTAGTGATTGACGCTCGAGAAAACATCTCGGATCAGGATTTGAGCTTATTGGGCTTCGCACTTAATGCGGGTCGTTCT ATCGTGCTGGCCGTGAACAAGTGGGATGGCTTGGATAACGAAGTGAAAGAGAATGTGAAGAAAGAGCTTGATCGTCGTCT TGGCTTCGTCGATTTTGCTCGCATCCACTTCATCTCTGCGTTGCACGGCACTGGCGTAGGCCATTTGTTTGAATCAGTTC AAGAAGCTTACCGCTCTGCAACCACTCGTGTAGGGACATCGGTACTGACGCGTATCATGAAGATGGCAACGGAAGATCAC CAACCGCCGATGGTTCGTGGCCGTCGTGTGAAACTGAAATATGCGCACGCAGGTGGTTATAACCCACCAATCGTGGTGAT CCATGGTAACCAAGTTCGTGAATTACCGGATTCTTACAAACGTTATCTAATGAACTACTTCCGTAAGTCACTAGATATCA TGGGTACGCCGATTCGTATTCAGTTCCAAAACAGTGATAACCCGTTTGAGAACCGTGTCAATAAGATGACCCTTTCTCAA GAGCGTGCACGTAAGCGCATGATGAGTGCGGTAAAAAATCGCAAGAAATAA
Upstream 100 bases:
>100_bases TGACAAGACGATTGTGGTTATAGGTAAAAAGCTGGTTTGAAGTGCTATCAAGCAAGTGGTTACCTATAACTACAGATCAA AGATTATTGTAGAGGTTGTT
Downstream 100 bases:
>100_bases TCTGAACTGTTTTTGATGCCCAAGTTTTACTTGGGCATTTTTTTATTTTCCGTTTCCCAATATGGATAACATGCCACATC ATTCGTTGAGCGGATGATGC
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGIDGSEEGVETKMAEQSLAAIR EADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNKVDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALD PFFDNLLSTNSEGEIEDLTNMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG TTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS IVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDH QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIMGTPIRIQFQNSDNPFENRVNKMTLSQ ERARKRMMSAVKNRKK
Sequences:
>Translated_496_residues MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGIDGSEEGVETKMAEQSLAAIR EADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNKVDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALD PFFDNLLSTNSEGEIEDLTNMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG TTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS IVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDH QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIMGTPIRIQFQNSDNPFENRVNKMTLSQ ERARKRMMSAVKNRKK >Mature_496_residues MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGIDGSEEGVETKMAEQSLAAIR EADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNKVDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALD PFFDNLLSTNSEGEIEDLTNMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG TTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDARENISDQDLSLLGFALNAGRS IVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDH QPPMVRGRRVKLKYAHAGGYNPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIMGTPIRIQFQNSDNPFENRVNKMTLSQ ERARKRMMSAVKNRKK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=495, Percent_Identity=71.9191919191919, Blast_Score=726, Evalue=0.0, Organism=Escherichia coli, GI2367268, Length=144, Percent_Identity=34.7222222222222, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788919, Length=124, Percent_Identity=34.6774193548387, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323665, Length=144, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 55486; Mature: 55486
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI CCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC DGSEEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNKV CCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEECC DGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDNLLSTNSEGEIEDLTN CCCCCCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC MEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCC TTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDAR CCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC ENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISA CCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH LHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAGGY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC NPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIMGTPIRIQFQNSDNPFENRVNKMTLSQ CCCEEEEECCHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH ERARKRMMSAVKNRKK HHHHHHHHHHHHHCCC >Mature Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI CCCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC DGSEEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNKV CCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEECC DGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDNLLSTNSEGEIEDLTN CCCCCCCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC MEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCC TTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDAR CCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC ENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFISA CCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH LHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAGGY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC NPPIVVIHGNQVRELPDSYKRYLMNYFRKSLDIMGTPIRIQFQNSDNPFENRVNKMTLSQ CCCEEEEECCHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH ERARKRMMSAVKNRKK HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA