| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is frmB [H]
Identifier: 37523995
GI number: 37523995
Start: 4652890
End: 4653738
Strand: Direct
Name: frmB [H]
Synonym: glr4426
Alternate gene names: 37523995
Gene position: 4652890-4653738 (Clockwise)
Preceding gene: 37523994
Following gene: 37523997
Centisome position: 99.87
GC content: 64.08
Gene sequence:
>849_bases ATGCGCGACGCACCCGAACTGTTATCCTCCCACCGCTGCTTCGGCGGGACGGTGGGCTTCTATCGGCACCACTCCGAGAC CTGCGACAGCCCGATGCGCTTTTCGGTGTTCACCCCACCCCAGGCGGCGGCCGGTCCGGTGCCGGTGCTCTATTTTTTGG CGGGTCTCACCTGTACCGAGGAAAATTTTATGGTCAAAGCCGGGGCACAGCGCGCCGCCGCCCGGTACGGCCTGATGCTG GTTGCCCCCGACACCAGCCCCCGCAAAACAGGGATCCCGGGTGAGGACGACGAATGGGACTTCGGCGCCGGGGCCGGTTT TTACGTCGATGCCACCGAGGAGCCGTGGAGCCTCCACTACCGCACGTACAGCTACGTGGTCGGCGAATTGCCATTGATCG TCGCTGCCCACTTTCCGGCGGATCCCGAGCGCACCGGCATCAGCGGCCACTCGATGGGGGGCCACGGCGCGCTGGTGTGC GCCTTCAAAAACCCGACGCGCTACCGCTCGGTCTCCGCCTTCGCGCCGATTGCCGCCCCGACGCGCTCGCCTTGGGGCCA GAAAGCTTTCTCGCGCTATTTGGGAGCAGACGAAAAGACCTGGAAGAGCTACGACGCGAGCGCCCTGGTGGCACTGGGTA CCATCGAGCCGACCATTCTCATCGACCAGGGAATGGCGGATCCGTACTTGGAGGAGCAGTTGCGCATCGACGAATTTGAG CAGGCCTGCGCCGCAATCGGCCAATCGCTGCTGCTGCGCCGTCAGGAAGGCTATGACCACAGCTACTATTTCATCGCCAG CTTCATCGACGATCACCTGCACCACCACGTCGAGGCGCTCGGGAGATAA
Upstream 100 bases:
>100_bases GACGATCTGATCACCCATGTCCTGCCGCTGGGCGAGATCAACCAGGCGTTCGACCTGATGCACGAAGGCAAATCCATCCG CACCGTGGTGACTTTTTAAG
Downstream 100 bases:
>100_bases CCAATTCCGGGGGATGGGGTGATTCCTGGAGGGGCAAGCTCGTTATGGTGCTCTCAGTGGAGTGAGTCGGACAGCCCATG GAGATCTACCAATTATTGGA
Product: S-formylglutathione hydrolase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MRDAPELLSSHRCFGGTVGFYRHHSETCDSPMRFSVFTPPQAAAGPVPVLYFLAGLTCTEENFMVKAGAQRAAARYGLML VAPDTSPRKTGIPGEDDEWDFGAGAGFYVDATEEPWSLHYRTYSYVVGELPLIVAAHFPADPERTGISGHSMGGHGALVC AFKNPTRYRSVSAFAPIAAPTRSPWGQKAFSRYLGADEKTWKSYDASALVALGTIEPTILIDQGMADPYLEEQLRIDEFE QACAAIGQSLLLRRQEGYDHSYYFIASFIDDHLHHHVEALGR
Sequences:
>Translated_282_residues MRDAPELLSSHRCFGGTVGFYRHHSETCDSPMRFSVFTPPQAAAGPVPVLYFLAGLTCTEENFMVKAGAQRAAARYGLML VAPDTSPRKTGIPGEDDEWDFGAGAGFYVDATEEPWSLHYRTYSYVVGELPLIVAAHFPADPERTGISGHSMGGHGALVC AFKNPTRYRSVSAFAPIAAPTRSPWGQKAFSRYLGADEKTWKSYDASALVALGTIEPTILIDQGMADPYLEEQLRIDEFE QACAAIGQSLLLRRQEGYDHSYYFIASFIDDHLHHHVEALGR >Mature_282_residues MRDAPELLSSHRCFGGTVGFYRHHSETCDSPMRFSVFTPPQAAAGPVPVLYFLAGLTCTEENFMVKAGAQRAAARYGLML VAPDTSPRKTGIPGEDDEWDFGAGAGFYVDATEEPWSLHYRTYSYVVGELPLIVAAHFPADPERTGISGHSMGGHGALVC AFKNPTRYRSVSAFAPIAAPTRSPWGQKAFSRYLGADEKTWKSYDASALVALGTIEPTILIDQGMADPYLEEQLRIDEFE QACAAIGQSLLLRRQEGYDHSYYFIASFIDDHLHHHVEALGR
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=280, Percent_Identity=54.6428571428571, Blast_Score=327, Evalue=1e-89, Organism=Escherichia coli, GI1786551, Length=276, Percent_Identity=47.463768115942, Blast_Score=288, Evalue=2e-79, Organism=Escherichia coli, GI1788477, Length=277, Percent_Identity=52.3465703971119, Blast_Score=277, Evalue=4e-76, Organism=Caenorhabditis elegans, GI17510185, Length=282, Percent_Identity=46.0992907801418, Blast_Score=253, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6322393, Length=287, Percent_Identity=37.6306620209059, Blast_Score=200, Evalue=3e-52, Organism=Drosophila melanogaster, GI45551932, Length=279, Percent_Identity=52.3297491039427, Blast_Score=291, Evalue=4e-79, Organism=Drosophila melanogaster, GI24648347, Length=279, Percent_Identity=52.3297491039427, Blast_Score=290, Evalue=6e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31028; Mature: 31028
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDAPELLSSHRCFGGTVGFYRHHSETCDSPMRFSVFTPPQAAAGPVPVLYFLAGLTCTE CCCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCEECC ENFMVKAGAQRAAARYGLMLVAPDTSPRKTGIPGEDDEWDFGAGAGFYVDATEEPWSLHY CCEEEECCHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE RTYSYVVGELPLIVAAHFPADPERTGISGHSMGGHGALVCAFKNPTRYRSVSAFAPIAAP EEEHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCCHHHCCCCCCC TRSPWGQKAFSRYLGADEKTWKSYDASALVALGTIEPTILIDQGMADPYLEEQLRIDEFE CCCCCHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHCHHHHH QACAAIGQSLLLRRQEGYDHSYYFIASFIDDHLHHHVEALGR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRDAPELLSSHRCFGGTVGFYRHHSETCDSPMRFSVFTPPQAAAGPVPVLYFLAGLTCTE CCCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCEECC ENFMVKAGAQRAAARYGLMLVAPDTSPRKTGIPGEDDEWDFGAGAGFYVDATEEPWSLHY CCEEEECCHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE RTYSYVVGELPLIVAAHFPADPERTGISGHSMGGHGALVCAFKNPTRYRSVSAFAPIAAP EEEHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCCHHHCCCCCCC TRSPWGQKAFSRYLGADEKTWKSYDASALVALGTIEPTILIDQGMADPYLEEQLRIDEFE CCCCCHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHCHHHHH QACAAIGQSLLLRRQEGYDHSYYFIASFIDDHLHHHVEALGR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA