Click here to switch to the map view.

The map label for this gene is yfhF [C]

Identifier: 37523951

GI number: 37523951

Start: 4612842

End: 4613216

Strand: Reverse

Name: yfhF [C]

Synonym: gll4382

Alternate gene names: 37523951

Gene position: 4613216-4612842 (Counterclockwise)

Preceding gene: 37523952

Following gene: 37523950

Centisome position: 99.02

GC content: 63.2

Gene sequence:

>375_bases
ATGACCACCAGCATCGACACCGCTCCGGCCCGTCGCCTTCCGCGCCGAGGCATCCAGATGACCGAAAGCGCCCTCGCCGA
GGTGATGCGCCTGCGCGAGCGCCGCGGCGGCGATCTGATGCTGCGCGTCGGCGTCAAAGGCGGCGGTTGCTCGGGCCTCA
GCTACACGATGGACTTCGAAGAAGAATCCAACGTCACCGCCCACGACGAGGTCTTCGACCACAGCGGCTTTAAAGTCGTC
TCCGACAAAAAGAGTCTGCTGTTTCTCTACGGGCTGGTGCTCGACTACAGCGACGAATTGTTGGGCGGCGGCTTCAAGTT
CAACAACCCCAACGCCGAGCGCTCCTGCTCCTGCGGCAGTTCCTTCTCGGCCTAG

Upstream 100 bases:

>100_bases
AAGATCCACTGCTCGGTGCCGGCTGAGGATGCCATGCGGGCTGCCGTTGCCGACTACCAGGCCGAACAATCCAAAACCCT
ACCCACCCAGGAATGACACC

Downstream 100 bases:

>100_bases
CGGCGCACCGCCCCATGGGCAGCACCGCCCGGCTGTTTCTGGACCCGGTTCAGTTTAGCGGTGATACCGCCCGGCTCGAC
CCGGCCCAGTCGCATTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTTSIDTAPARRLPRRGIQMTESALAEVMRLRERRGGDLMLRVGVKGGGCSGLSYTMDFEEESNVTAHDEVFDHSGFKVV
SDKKSLLFLYGLVLDYSDELLGGGFKFNNPNAERSCSCGSSFSA

Sequences:

>Translated_124_residues
MTTSIDTAPARRLPRRGIQMTESALAEVMRLRERRGGDLMLRVGVKGGGCSGLSYTMDFEEESNVTAHDEVFDHSGFKVV
SDKKSLLFLYGLVLDYSDELLGGGFKFNNPNAERSCSCGSSFSA
>Mature_123_residues
TTSIDTAPARRLPRRGIQMTESALAEVMRLRERRGGDLMLRVGVKGGGCSGLSYTMDFEEESNVTAHDEVFDHSGFKVVS
DKKSLLFLYGLVLDYSDELLGGGFKFNNPNAERSCSCGSSFSA

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family. Ycf83 subfamily [H]

Homologues:

Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=43.9252336448598, Blast_Score=84, Evalue=3e-17,
Organism=Homo sapiens, GI52426768, Length=130, Percent_Identity=33.0769230769231, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=46.6666666666667, Blast_Score=90, Evalue=4e-20,
Organism=Escherichia coli, GI1786351, Length=107, Percent_Identity=38.3177570093458, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787974, Length=107, Percent_Identity=33.6448598130841, Blast_Score=71, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25146411, Length=119, Percent_Identity=32.7731092436975, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71998452, Length=127, Percent_Identity=35.4330708661417, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193209025, Length=109, Percent_Identity=33.0275229357798, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323001, Length=83, Percent_Identity=38.5542168674699, Blast_Score=70, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24649697, Length=118, Percent_Identity=43.2203389830509, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24642263, Length=124, Percent_Identity=35.4838709677419, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13551; Mature: 13420

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSIDTAPARRLPRRGIQMTESALAEVMRLRERRGGDLMLRVGVKGGGCSGLSYTMDFE
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCC
EESNVTAHDEVFDHSGFKVVSDKKSLLFLYGLVLDYSDELLGGGFKFNNPNAERSCSCGS
CCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHCCHHHHCCCEEECCCCCCCCCCCCC
SFSA
CCCC
>Mature Secondary Structure 
TTSIDTAPARRLPRRGIQMTESALAEVMRLRERRGGDLMLRVGVKGGGCSGLSYTMDFE
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCC
EESNVTAHDEVFDHSGFKVVSDKKSLLFLYGLVLDYSDELLGGGFKFNNPNAERSCSCGS
CCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHCCHHHHCCCEEECCCCCCCCCCCCC
SFSA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]