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The map label for this gene is chlP [H]

Identifier: 37523946

GI number: 37523946

Start: 4608849

End: 4610045

Strand: Direct

Name: chlP [H]

Synonym: gvip568

Alternate gene names: 37523946

Gene position: 4608849-4610045 (Clockwise)

Preceding gene: 37523945

Following gene: 37523947

Centisome position: 98.92

GC content: 63.66

Gene sequence:

>1197_bases
GTGACACTTCGAGTAGCGGTGGTGGGTTCGGGTCCTGGCGGTTCGAGCGCCGCCGAAATTTGTGCGAAGGCCGGGTTTGA
AACTTATCTCATCGAGAAGAACCTGAGCAACGCCAAACCCTGCGGCGGGGCGATTCCGCTGTGCATGGTAAGCGAGTTCG
ATTTGCCCAGCGAGATCATCGACCGGCGTGTGCGCAACATGTCGATGATTGCCCCGAGCAACCACGCGGTGGACATCTCC
CTTACCAAGCAGGACGAATACATCGGCATGTGCCGCCGCGAGGTGCTGGATGGGTTCTTGCGCAACCGGGCCGCTTCGGT
GGGAGCGCACCTCATCGAGGGCACCTTCACCGAACTCAAGCGCGGCACCCCCTACGTTCTGGAGTACCGCGACAAGGACG
GCAACGCCCGCTCCCTCAAAGCGGACATCGTGATCGGTGCCGACGGCTTTCACTCAAAGATCGCCAAGACCATCGACGCC
GGGGACGTGCCCTACGCCATCGCCTTTCAAGAGCGCATCGAGTTGCCGCCCGAGAAGATGGCCTACTACGAAGACCGCGC
CGAGATGTACCTGGGTTTTGACGTCTCGCCCGATTTTTATGCCTGGATCTTTCCGAAGTCGAATCACGTCGCCGTCGGCA
CCGGCACCATGTCCCCCAACAAAGACGGCATCCGCCGGATGCAGAAGGCGCTGCGCGAGCGGGCGGGGGCCAAAATCGCC
GGGGGCAAGATTATCAAAATTGAAGCGCACCCGCTGCCGGAGCGCTCGCGCCCGCGCCGGGTGGTAGACCGGGTAATGCT
GGTGGGCGACGCTGCGGGCTACGTCACCAAATCGAGCGGCGAAGGCATCTACTTCGCCGCCAAGTCCGGCCGCATGGCCG
CCCAGACGATCGTCGAGGCGGCCGCAGGCGGCAAGCTGCCCTCCGAAGCGCAATTGGGCGAATATGTGCGGCGCTGGGAC
CGCCAGTACGGCCTCACCTACCGGGTGCTCTCGATCCTGCAGGATGTCTTCTACCGCAGCGACGCCACCCGCGAGGCGTT
CGTCGAGATGTGCGCCGACCGCGACGTGCAGCGGCTGACGTTCGATTCGTACCTGTACAAGACCGTGGTCCCCGCCGGTC
CCTTCGTGCAGACCAAGATCACCCTCAAGACGCTCGGCTCGCTACTGCGGGGCAATGCCCTCTCCCCCACCCGCTAG

Upstream 100 bases:

>100_bases
GCCGCGACGTTTTGTTACACTACGCAATCTCCCACCGGGAGCCGCGAAAGTGCGTGTTAATATGCCCACCAGTCGGGCGT
CTTGCGGCGGAGGGAAACCA

Downstream 100 bases:

>100_bases
ACCGCTCGTCATCGCCCACCGCGGCTGCCGGGCGCAGGTGCCCGAGAATACGCTGCCGGCTTTCGAAAGAGCCCTCGACC
TGCGCGTCGACGGTATCGAG

Product: geranylgeranyl hydrogenase

Products: NA

Alternate protein names: Geranylgeranyl reductase [H]

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTLRVAVVGSGPGGSSAAEICAKAGFETYLIEKNLSNAKPCGGAIPLCMVSEFDLPSEIIDRRVRNMSMIAPSNHAVDIS
LTKQDEYIGMCRREVLDGFLRNRAASVGAHLIEGTFTELKRGTPYVLEYRDKDGNARSLKADIVIGADGFHSKIAKTIDA
GDVPYAIAFQERIELPPEKMAYYEDRAEMYLGFDVSPDFYAWIFPKSNHVAVGTGTMSPNKDGIRRMQKALRERAGAKIA
GGKIIKIEAHPLPERSRPRRVVDRVMLVGDAAGYVTKSSGEGIYFAAKSGRMAAQTIVEAAAGGKLPSEAQLGEYVRRWD
RQYGLTYRVLSILQDVFYRSDATREAFVEMCADRDVQRLTFDSYLYKTVVPAGPFVQTKITLKTLGSLLRGNALSPTR

Sequences:

>Translated_398_residues
MTLRVAVVGSGPGGSSAAEICAKAGFETYLIEKNLSNAKPCGGAIPLCMVSEFDLPSEIIDRRVRNMSMIAPSNHAVDIS
LTKQDEYIGMCRREVLDGFLRNRAASVGAHLIEGTFTELKRGTPYVLEYRDKDGNARSLKADIVIGADGFHSKIAKTIDA
GDVPYAIAFQERIELPPEKMAYYEDRAEMYLGFDVSPDFYAWIFPKSNHVAVGTGTMSPNKDGIRRMQKALRERAGAKIA
GGKIIKIEAHPLPERSRPRRVVDRVMLVGDAAGYVTKSSGEGIYFAAKSGRMAAQTIVEAAAGGKLPSEAQLGEYVRRWD
RQYGLTYRVLSILQDVFYRSDATREAFVEMCADRDVQRLTFDSYLYKTVVPAGPFVQTKITLKTLGSLLRGNALSPTR
>Mature_397_residues
TLRVAVVGSGPGGSSAAEICAKAGFETYLIEKNLSNAKPCGGAIPLCMVSEFDLPSEIIDRRVRNMSMIAPSNHAVDISL
TKQDEYIGMCRREVLDGFLRNRAASVGAHLIEGTFTELKRGTPYVLEYRDKDGNARSLKADIVIGADGFHSKIAKTIDAG
DVPYAIAFQERIELPPEKMAYYEDRAEMYLGFDVSPDFYAWIFPKSNHVAVGTGTMSPNKDGIRRMQKALRERAGAKIAG
GKIIKIEAHPLPERSRPRRVVDRVMLVGDAAGYVTKSSGEGIYFAAKSGRMAAQTIVEAAAGGKLPSEAQLGEYVRRWDR
QYGLTYRVLSILQDVFYRSDATREAFVEMCADRDVQRLTFDSYLYKTVVPAGPFVQTKITLKTLGSLLRGNALSPTR

Specific function: Catalyzes the stepwise hydrogenation of geranylgeraniol to phytol during chlorophyll A (ChlA) biosynthesis [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010253
- InterPro:   IPR011774
- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR016040
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.3.1.83 [H]

Molecular weight: Translated: 43784; Mature: 43653

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRVAVVGSGPGGSSAAEICAKAGFETYLIEKNLSNAKPCGGAIPLCMVSEFDLPSEII
CEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHH
DRRVRNMSMIAPSNHAVDISLTKQDEYIGMCRREVLDGFLRNRAASVGAHLIEGTFTELK
HHHHHHCEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTPYVLEYRDKDGNARSLKADIVIGADGFHSKIAKTIDAGDVPYAIAFQERIELPPEKM
CCCCEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHH
AYYEDRAEMYLGFDVSPDFYAWIFPKSNHVAVGTGTMSPNKDGIRRMQKALRERAGAKIA
HHHHCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEC
GGKIIKIEAHPLPERSRPRRVVDRVMLVGDAAGYVTKSSGEGIYFAAKSGRMAAQTIVEA
CCEEEEEECCCCCCCCCHHHHHHHHHHEECCCCCEECCCCCEEEEEECCCCHHHHHHHHH
AAGGKLPSEAQLGEYVRRWDRQYGLTYRVLSILQDVFYRSDATREAFVEMCADRDVQRLT
HCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
FDSYLYKTVVPAGPFVQTKITLKTLGSLLRGNALSPTR
HHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TLRVAVVGSGPGGSSAAEICAKAGFETYLIEKNLSNAKPCGGAIPLCMVSEFDLPSEII
EEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHH
DRRVRNMSMIAPSNHAVDISLTKQDEYIGMCRREVLDGFLRNRAASVGAHLIEGTFTELK
HHHHHHCEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTPYVLEYRDKDGNARSLKADIVIGADGFHSKIAKTIDAGDVPYAIAFQERIELPPEKM
CCCCEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHH
AYYEDRAEMYLGFDVSPDFYAWIFPKSNHVAVGTGTMSPNKDGIRRMQKALRERAGAKIA
HHHHCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEC
GGKIIKIEAHPLPERSRPRRVVDRVMLVGDAAGYVTKSSGEGIYFAAKSGRMAAQTIVEA
CCEEEEEECCCCCCCCCHHHHHHHHHHEECCCCCEECCCCCEEEEEECCCCHHHHHHHHH
AAGGKLPSEAQLGEYVRRWDRQYGLTYRVLSILQDVFYRSDATREAFVEMCADRDVQRLT
HCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH
FDSYLYKTVVPAGPFVQTKITLKTLGSLLRGNALSPTR
HHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8766814; 8905231 [H]