| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523947
Identifier: 37523947
GI number: 37523947
Start: 4610023
End: 4610916
Strand: Direct
Name: 37523947
Synonym: glr4378
Alternate gene names: NA
Gene position: 4610023-4610916 (Clockwise)
Preceding gene: 37523946
Following gene: 37523948
Centisome position: 98.95
GC content: 57.72
Gene sequence:
>894_bases ATGCCCTCTCCCCCACCCGCTAGACCGCTCGTCATCGCCCACCGCGGCTGCCGGGCGCAGGTGCCCGAGAATACGCTGCC GGCTTTCGAAAGAGCCCTCGACCTGCGCGTCGACGGTATCGAGATGGACTTACACCTGAGCGGCGACGGCCAGGTGCTGG TCAGCCACGACCCGCGCCCGCTGCCCGGCAAATGCCGCCTCAGCACCGGTCCGCTTCCTGTGGAGCCGCCTTGCTGGGGA GAGTTGGAACTGTCAACGATTCAAGATAATTACATCGCTGATTGCCAGTTCGAATTGGGGTCCGCGGAGCGCCCAAAAAC CCTCTACACAGGCCGGATCGCACCGCTGTTGATGAAAAATGTAGCTAGCGTCTTTGTGCCGCCTACCCTCGAGCAGGTGT TCGCGTTGCTAGCGGCTTATGGGCAATTGGGTGCCGAACAGGCACTATATTTGCAAAGCATTCGCATATTTCTTGAGATC AAACGCGCCCCGTTTTATGACGCCCTATGGCTTGGCCCCCATGGCGAGCGCTTCGAACAGTGTGTTGCCTCTGCGATTGA ACGATCGAGTTTCTGTAAGAATGTTGTGGTTCTGTCCTTTGTGCCCCGCGCACTTCAGGCGATCGGGCAGTGCAATCGCT CGATTCGAACTGCCCTACTTACCGCACATACACCGGTCAATTTGCTGACCGATATGCAACACCTTAATGCACAGCTGTGG TGTCCCTACTACCAGTCTATCGATCGCTCCGCAGTCGAGATAGCCCAGGCGGCCGGTCTACAGGTAATACCCTGGACTGT CAATGACGCCAAGGAAATGGCTGTACTTACCGAATGGCGGGTGAACGGTTTGGTTACCGATGTGCCCGATCTTTTGCAGG CGCTGGGTTGCTGA
Upstream 100 bases:
>100_bases CTGACGTTCGATTCGTACCTGTACAAGACCGTGGTCCCCGCCGGTCCCTTCGTGCAGACCAAGATCACCCTCAAGACGCT CGGCTCGCTACTGCGGGGCA
Downstream 100 bases:
>100_bases AAAGTCAAAAAATCGCTTCCCGCTTCCCCGGGAACTTCGCTATGTTTGATGTATAGTTTGCAACAGCAAGCCATGATCCC GGAGGAAAAACAGTAGATAT
Product: hypothetical protein
Products: alcohol; sn-glycerol 3-phosphate
Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPSPPPARPLVIAHRGCRAQVPENTLPAFERALDLRVDGIEMDLHLSGDGQVLVSHDPRPLPGKCRLSTGPLPVEPPCWG ELELSTIQDNYIADCQFELGSAERPKTLYTGRIAPLLMKNVASVFVPPTLEQVFALLAAYGQLGAEQALYLQSIRIFLEI KRAPFYDALWLGPHGERFEQCVASAIERSSFCKNVVVLSFVPRALQAIGQCNRSIRTALLTAHTPVNLLTDMQHLNAQLW CPYYQSIDRSAVEIAQAAGLQVIPWTVNDAKEMAVLTEWRVNGLVTDVPDLLQALGC
Sequences:
>Translated_297_residues MPSPPPARPLVIAHRGCRAQVPENTLPAFERALDLRVDGIEMDLHLSGDGQVLVSHDPRPLPGKCRLSTGPLPVEPPCWG ELELSTIQDNYIADCQFELGSAERPKTLYTGRIAPLLMKNVASVFVPPTLEQVFALLAAYGQLGAEQALYLQSIRIFLEI KRAPFYDALWLGPHGERFEQCVASAIERSSFCKNVVVLSFVPRALQAIGQCNRSIRTALLTAHTPVNLLTDMQHLNAQLW CPYYQSIDRSAVEIAQAAGLQVIPWTVNDAKEMAVLTEWRVNGLVTDVPDLLQALGC >Mature_296_residues PSPPPARPLVIAHRGCRAQVPENTLPAFERALDLRVDGIEMDLHLSGDGQVLVSHDPRPLPGKCRLSTGPLPVEPPCWGE LELSTIQDNYIADCQFELGSAERPKTLYTGRIAPLLMKNVASVFVPPTLEQVFALLAAYGQLGAEQALYLQSIRIFLEIK RAPFYDALWLGPHGERFEQCVASAIERSSFCKNVVVLSFVPRALQAIGQCNRSIRTALLTAHTPVNLLTDMQHLNAQLWC PYYQSIDRSAVEIAQAAGLQVIPWTVNDAKEMAVLTEWRVNGLVTDVPDLLQALGC
Specific function: Unknown
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.4.46
Molecular weight: Translated: 32728; Mature: 32597
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPPPARPLVIAHRGCRAQVPENTLPAFERALDLRVDGIEMDLHLSGDGQVLVSHDPRP CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCEECCEEEEEEECCCCEEEEECCCCC LPGKCRLSTGPLPVEPPCWGELELSTIQDNYIADCQFELGSAERPKTLYTGRIAPLLMKN CCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEECCCHHHHHHHH VASVFVPPTLEQVFALLAAYGQLGAEQALYLQSIRIFLEIKRAPFYDALWLGPHGERFEQ HHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCCEEEEECCCHHHHHH CVASAIERSSFCKNVVVLSFVPRALQAIGQCNRSIRTALLTAHTPVNLLTDMQHLNAQLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEE CPYYQSIDRSAVEIAQAAGLQVIPWTVNDAKEMAVLTEWRVNGLVTDVPDLLQALGC CHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure PSPPPARPLVIAHRGCRAQVPENTLPAFERALDLRVDGIEMDLHLSGDGQVLVSHDPRP CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCEECCEEEEEEECCCCEEEEECCCCC LPGKCRLSTGPLPVEPPCWGELELSTIQDNYIADCQFELGSAERPKTLYTGRIAPLLMKN CCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEECCCHHHHHHHH VASVFVPPTLEQVFALLAAYGQLGAEQALYLQSIRIFLEIKRAPFYDALWLGPHGERFEQ HHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCCEEEEECCCHHHHHH CVASAIERSSFCKNVVVLSFVPRALQAIGQCNRSIRTALLTAHTPVNLLTDMQHLNAQLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEE CPYYQSIDRSAVEIAQAAGLQVIPWTVNDAKEMAVLTEWRVNGLVTDVPDLLQALGC CHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: glycerophosphodiester; H2O
Specific reaction: A glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA