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The map label for this gene is yjcF [C]

Identifier: 37523863

GI number: 37523863

Start: 4515754

End: 4516485

Strand: Direct

Name: yjcF [C]

Synonym: glr4294

Alternate gene names: 37523863

Gene position: 4515754-4516485 (Clockwise)

Preceding gene: 37523862

Following gene: 37523865

Centisome position: 96.92

GC content: 66.39

Gene sequence:

>732_bases
ATGGCAGAACTGGCAAGACATCAGATTGTCCTGAGCATCATCAACACCCCGGCGGGCGCAACGTTGCGCTTTCGGGGCCT
CAACCTCGCCGGTCTCGATCTGTCGGGAGGATTGGATCTATCGCGGGCCAATTTTTCGCTTGCGGACCTGAGCGGGGTAC
AGCTACAGCAGGCCGACCTGGAGCAGGCGCGCTTCTGGAAGACGGATCTGCGCATGGCCGATTTGCGGCACACCCACCTG
GCCGGGGCGATGCTTGCCGAGGCGCGTCTGGCGCGGGCCAACTTGCGGCAGGCCGACCTGCGGGGGGCAAATCTGCAGGG
GGCGAATCTGGCCCATGCGGATCTCAGTGCAGCGGATCTCACCGATGCCGCCCTGCAGGGAGCGGACCTCGCCGGGGCGA
TCCTGGACGATTGCAAACTTGAAAGGGCAGATTTGAGCGGCGCTGTGCTGACGGGCGCCAGCCTGCAGCACGCGGTCCTC
ATCGACGCCAATCTGCACGGAGCGAGACTGACGGGGGCGGATTTGCAGGGGGCGCACCTGATCGACGCCACCTGCACCGG
CGCGGATCTAAGCGGCGCCAGCCTGCGGGCGGCGGATCTGTCGCGGGCCGTCCTGGTGGACACGGACCTGAGCGGAGCGA
ACCTGGCTGGAGCCGATGTCACCCACACGGACCTGCGCCGGGCCATCCTGCGCAACGTCCACTGGGACGGCCCTTCCTAT
TCGCAAAGCTGA

Upstream 100 bases:

>100_bases
GTCCCCTGCGCATTTACCCAGTGCGCACAGTCGATGAGCAAATCCAGGTGGGGATGCCGGAGGCAGGCGGAACCCCACGG
TTCCCTTGAGAGGTTGCACG

Downstream 100 bases:

>100_bases
GCCCTTCTCCTGGGCAGCTACTGGGCAACGAAGCCCGCTACCACGACGCTGATGGCCCACAAAATTGCCATGGTCCCGAG
TACTACGCCGGCGTCGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAELARHQIVLSIINTPAGATLRFRGLNLAGLDLSGGLDLSRANFSLADLSGVQLQQADLEQARFWKTDLRMADLRHTHL
AGAMLAEARLARANLRQADLRGANLQGANLAHADLSAADLTDAALQGADLAGAILDDCKLERADLSGAVLTGASLQHAVL
IDANLHGARLTGADLQGAHLIDATCTGADLSGASLRAADLSRAVLVDTDLSGANLAGADVTHTDLRRAILRNVHWDGPSY
SQS

Sequences:

>Translated_243_residues
MAELARHQIVLSIINTPAGATLRFRGLNLAGLDLSGGLDLSRANFSLADLSGVQLQQADLEQARFWKTDLRMADLRHTHL
AGAMLAEARLARANLRQADLRGANLQGANLAHADLSAADLTDAALQGADLAGAILDDCKLERADLSGAVLTGASLQHAVL
IDANLHGARLTGADLQGAHLIDATCTGADLSGASLRAADLSRAVLVDTDLSGANLAGADVTHTDLRRAILRNVHWDGPSY
SQS
>Mature_242_residues
AELARHQIVLSIINTPAGATLRFRGLNLAGLDLSGGLDLSRANFSLADLSGVQLQQADLEQARFWKTDLRMADLRHTHLA
GAMLAEARLARANLRQADLRGANLQGANLAHADLSAADLTDAALQGADLAGAILDDCKLERADLSGAVLTGASLQHAVLI
DANLHGARLTGADLQGAHLIDATCTGADLSGASLRAADLSRAVLVDTDLSGANLAGADVTHTDLRRAILRNVHWDGPSYS
QS

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI221377802, Length=203, Percent_Identity=33.4975369458128, Blast_Score=88, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 25358; Mature: 25227

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELARHQIVLSIINTPAGATLRFRGLNLAGLDLSGGLDLSRANFSLADLSGVQLQQADL
CCCHHHHHEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCCCEEECCCCCEEHHHHH
EQARFWKTDLRMADLRHTHLAGAMLAEARLARANLRQADLRGANLQGANLAHADLSAADL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHH
TDAALQGADLAGAILDDCKLERADLSGAVLTGASLQHAVLIDANLHGARLTGADLQGAHL
HHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCCCEE
IDATCTGADLSGASLRAADLSRAVLVDTDLSGANLAGADVTHTDLRRAILRNVHWDGPSY
EEEEECCCCCCCCEEEHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
SQS
CCC
>Mature Secondary Structure 
AELARHQIVLSIINTPAGATLRFRGLNLAGLDLSGGLDLSRANFSLADLSGVQLQQADL
CCHHHHHEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCCCEEECCCCCEEHHHHH
EQARFWKTDLRMADLRHTHLAGAMLAEARLARANLRQADLRGANLQGANLAHADLSAADL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHH
TDAALQGADLAGAILDDCKLERADLSGAVLTGASLQHAVLIDANLHGARLTGADLQGAHL
HHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCCCEE
IDATCTGADLSGASLRAADLSRAVLVDTDLSGANLAGADVTHTDLRRAILRNVHWDGPSY
EEEEECCCCCCCCEEEHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
SQS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA