| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is btuB [H]
Identifier: 37523865
GI number: 37523865
Start: 4518611
End: 4521361
Strand: Direct
Name: btuB [H]
Synonym: glr4296
Alternate gene names: 37523865
Gene position: 4518611-4521361 (Clockwise)
Preceding gene: 37523863
Following gene: 37523866
Centisome position: 96.99
GC content: 60.74
Gene sequence:
>2751_bases ATGAACAAGAGAATCGGGAGTGGAATGGAGAGTCGGTTTGTAAGCGCGCTGGTATTGCTTGCGGGTTCGTTCACCGTGGG GTGGACGAGCGCGGTGTCTGCCGAAGTGCCCCCCCCGGTACTGGCGCGGGCGAGCGCACCGGAGCCTATCCGCGCGCAGG ATTTGCTGCGCGAGCACACCGGCCGCCAGGCGATCGATTTGAAGGCGGTGCCGTCCGCGTGGGATTGGACACAGCCGGTC ATTGAACCGCAGGTGGGCCAGGCGCCCCCCGCCGCTCCAACTCCTGCGCCGGCCGCTACTGCGGAGGAGCCTGCCACCGC CCAGCAGACCGACGAAGGCGACTTTCTCGACGAGGTGGCGGTGACGGCGACCCGGCGCCCCACCCGGGCGCGCGATTCCA CCCAATCGGTCAATGTCATCAAGCGCGAAGATTTTCAGGCCCAAGGGGCGGTGACCGTCTCCGACGCGCTGCTATTGATT CCGGGCTTCAACAACTCCACCCCGGCATTGGGTGGCCAGAGTAATTTGAGCGCCAACTTCCTGCGCGGTTTCGGCGACAC CCAGTATGTGGTGTTGCGCGACGGCGTGCGCCTCGGATCGCCCTTTAACGGCCGCTCGGATGTCTCCGCGCTGGTACTCG ACGACCTGGAGCGCATTGAGGTGATCACCGGCGGTTCGACGCTGCGCTACGGTTCCGGTTCGGTGGGCGGCGTCATCAAC TTGATCACCGAGACGCCCAAGGGACCGCCCAAACTCAGCCTCAGCTACCAGTACGGCAGCTACTCGTTCAACCGCTTCGT GGGCAAGTACTCGGGCGGCGACGATACGTTTTCCTACAACTTGATCTTTACCGGCATCGCCGCGGGCAACAATTACCCGT TCGGCTTCACGCTGCCCACCTCGCCCCAGTTTTACGGCCCCAACGACGTGGTGACTGGTTCCAGTTGTGTCGGTCCCCTG GGTCGAGCCTGCGGGGACGGCAGTTTGCCCAACGGCACGAATCTCTACGGTTTTCTCAAGCCCGAGGTCGGTCCACCCAC CAAGGTGCAGGGGATCAACGATCTCTCCCACGTCGGCAACGACAACTATATGGGCAAGTTCACCTTCAAACCCGACACCG ACAACAAACTGACCCTGCGCCTCAATCAGCACAACCTGAGCATCGGCGATCGCAGCCCCGGCTACTTCGACTACAACATC TGCGGCTTTTTTACCGGCCCCACCACCACCTCCAACGGCACCTACTTCAACAACGATTTCGGCGTGGCGGCGCGCTTTTT GCCCCTCAACGCCCAGGGCCAGGAGGTGCGCTGTCCAGTGCAGACTTATCTGCCGGTCACCCCTTCCTCCACCCTCGCTT TTCCGTTCAACTACTCCCGAAATTACGCCGGCAATCTTTCCGTTCCAACGGGCACCGCCTTCCCGCAGGCAGAAAGAGCC CAGGGCGACGACTCGTTTTTCAGGCAGCGTAGCCTGAGTGAAACGGAGGCATCCCTGACCTGGGATTGGGATATTTCGCC TTCGCAGTCGGTCAACAGCTACCTCGCGTACTACAAGCAATCGCTGAACTTTTTCCGGCCCAACCTGTACTACTACAACA CGGACGTCTTAGGCGGTCAGGCAGCGAACGGTCCCACCGCGAGCGGCGTGGGCGAACTGCAGGTCGGTCCGGTGTTTCGC CCTTATATCGAAGGCCAGCGCTTCGAAGTCCAGAGCACCTACAATGTCCAGCTCTCGCCTGGGCAGATCCTGAGCGTCGG CGCCAACTTCGTGCAAGACCGGATTTATGTGCAGACCAACACCGACCGGGACGACTTTAATGTGCTTACGGTTTCGTATC AAGACGTCGCCACCAGCCGTACTTCGATCTTTATCGTCGATGACATCAGCTTCAGCGACCTGCTCAAGACCAACTTCGGA GTGCGATACACCTACAGCGACCAGTTCGGCCAGATTCTCACCCCGGCGGCGGGGGTGCGGGTGAACCTGGCCAATAACCT GTCGCTGCGGGGCAACTACTCCCAGGTCTTCAACGCCCCGAGCCTTAACAACCTGTATATCAGCACCGGCACCTACGGCC AGAACACCGGCATTCCCAACCCGAACCTCAAGCCCGAGACGGGGATCACCTTCGACGTGGGGGTCGACTACAGCCCGCTG CGCAACCTGTTTGTGAAGCTTACCTACTTCAGCACCTACGTCGACAACACTTTCCAGCGCCGAATTTTCCTGAACCCGAA CTTTACGCCGGGCAGCACCACCGAATCGATCATCATCGATCAGACGATCAACCTGGGCAGCCGCCGGGGTAACGGCATCG AATTTTCGGCCGACTGGCGCTTTGCGGATCAGTGGCAGCTTCGGGCGATCTGGACGAATGTCGACGCGCGCCCCTACGGC AACTATTCCGACGACATCGATAGTTTCACCTATCCCAACTTCAAGGAGTACCAGGATTACAACATCCCCTACAACAGCGC AATTGGCGCCCTCACCTATGCCAACAAGGGGCTGACCGCCACGCTTTTGGCCCGCTACGACGACGGCAAGTACCGCTTTC GCGGGGACAACAGCACCCGGGTACCCTCGTGGTTCACCCTCGACCTCAACGTCGAAATTCCGATCACGCCGCTCTTTACG CTCACCGGCAGCGTCTTCAACCTCACCGATACCCAGTACGAATACCTGGATGCCAACCCCGCCCCCGGCACCACCTTTCG GATCGGCGGACGCTTCGACATCGGTGGGTAG
Upstream 100 bases:
>100_bases TCATCAGAATATGCCGATGGCAGAGCTGTTTGCCCGGCTTCCAATTGGTGTGCCTGTCCGCGAGCAAGATTGGTTGATTG ATTTGTGAGGAGCAATCGGG
Downstream 100 bases:
>100_bases GGGCGAATTGATCCCGCAGCGTCAATAAAAGTAGCGACGCTCATGAGTTTGCTGCAGTCCACTCCTTGCCCTAGCCGCCC ACTTCGGTGCGCGGCTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 916; Mature: 916
Protein sequence:
>916_residues MNKRIGSGMESRFVSALVLLAGSFTVGWTSAVSAEVPPPVLARASAPEPIRAQDLLREHTGRQAIDLKAVPSAWDWTQPV IEPQVGQAPPAAPTPAPAATAEEPATAQQTDEGDFLDEVAVTATRRPTRARDSTQSVNVIKREDFQAQGAVTVSDALLLI PGFNNSTPALGGQSNLSANFLRGFGDTQYVVLRDGVRLGSPFNGRSDVSALVLDDLERIEVITGGSTLRYGSGSVGGVIN LITETPKGPPKLSLSYQYGSYSFNRFVGKYSGGDDTFSYNLIFTGIAAGNNYPFGFTLPTSPQFYGPNDVVTGSSCVGPL GRACGDGSLPNGTNLYGFLKPEVGPPTKVQGINDLSHVGNDNYMGKFTFKPDTDNKLTLRLNQHNLSIGDRSPGYFDYNI CGFFTGPTTTSNGTYFNNDFGVAARFLPLNAQGQEVRCPVQTYLPVTPSSTLAFPFNYSRNYAGNLSVPTGTAFPQAERA QGDDSFFRQRSLSETEASLTWDWDISPSQSVNSYLAYYKQSLNFFRPNLYYYNTDVLGGQAANGPTASGVGELQVGPVFR PYIEGQRFEVQSTYNVQLSPGQILSVGANFVQDRIYVQTNTDRDDFNVLTVSYQDVATSRTSIFIVDDISFSDLLKTNFG VRYTYSDQFGQILTPAAGVRVNLANNLSLRGNYSQVFNAPSLNNLYISTGTYGQNTGIPNPNLKPETGITFDVGVDYSPL RNLFVKLTYFSTYVDNTFQRRIFLNPNFTPGSTTESIIIDQTINLGSRRGNGIEFSADWRFADQWQLRAIWTNVDARPYG NYSDDIDSFTYPNFKEYQDYNIPYNSAIGALTYANKGLTATLLARYDDGKYRFRGDNSTRVPSWFTLDLNVEIPITPLFT LTGSVFNLTDTQYEYLDANPAPGTTFRIGGRFDIGG
Sequences:
>Translated_916_residues MNKRIGSGMESRFVSALVLLAGSFTVGWTSAVSAEVPPPVLARASAPEPIRAQDLLREHTGRQAIDLKAVPSAWDWTQPV IEPQVGQAPPAAPTPAPAATAEEPATAQQTDEGDFLDEVAVTATRRPTRARDSTQSVNVIKREDFQAQGAVTVSDALLLI PGFNNSTPALGGQSNLSANFLRGFGDTQYVVLRDGVRLGSPFNGRSDVSALVLDDLERIEVITGGSTLRYGSGSVGGVIN LITETPKGPPKLSLSYQYGSYSFNRFVGKYSGGDDTFSYNLIFTGIAAGNNYPFGFTLPTSPQFYGPNDVVTGSSCVGPL GRACGDGSLPNGTNLYGFLKPEVGPPTKVQGINDLSHVGNDNYMGKFTFKPDTDNKLTLRLNQHNLSIGDRSPGYFDYNI CGFFTGPTTTSNGTYFNNDFGVAARFLPLNAQGQEVRCPVQTYLPVTPSSTLAFPFNYSRNYAGNLSVPTGTAFPQAERA QGDDSFFRQRSLSETEASLTWDWDISPSQSVNSYLAYYKQSLNFFRPNLYYYNTDVLGGQAANGPTASGVGELQVGPVFR PYIEGQRFEVQSTYNVQLSPGQILSVGANFVQDRIYVQTNTDRDDFNVLTVSYQDVATSRTSIFIVDDISFSDLLKTNFG VRYTYSDQFGQILTPAAGVRVNLANNLSLRGNYSQVFNAPSLNNLYISTGTYGQNTGIPNPNLKPETGITFDVGVDYSPL RNLFVKLTYFSTYVDNTFQRRIFLNPNFTPGSTTESIIIDQTINLGSRRGNGIEFSADWRFADQWQLRAIWTNVDARPYG NYSDDIDSFTYPNFKEYQDYNIPYNSAIGALTYANKGLTATLLARYDDGKYRFRGDNSTRVPSWFTLDLNVEIPITPLFT LTGSVFNLTDTQYEYLDANPAPGTTFRIGGRFDIGG >Mature_916_residues MNKRIGSGMESRFVSALVLLAGSFTVGWTSAVSAEVPPPVLARASAPEPIRAQDLLREHTGRQAIDLKAVPSAWDWTQPV IEPQVGQAPPAAPTPAPAATAEEPATAQQTDEGDFLDEVAVTATRRPTRARDSTQSVNVIKREDFQAQGAVTVSDALLLI PGFNNSTPALGGQSNLSANFLRGFGDTQYVVLRDGVRLGSPFNGRSDVSALVLDDLERIEVITGGSTLRYGSGSVGGVIN LITETPKGPPKLSLSYQYGSYSFNRFVGKYSGGDDTFSYNLIFTGIAAGNNYPFGFTLPTSPQFYGPNDVVTGSSCVGPL GRACGDGSLPNGTNLYGFLKPEVGPPTKVQGINDLSHVGNDNYMGKFTFKPDTDNKLTLRLNQHNLSIGDRSPGYFDYNI CGFFTGPTTTSNGTYFNNDFGVAARFLPLNAQGQEVRCPVQTYLPVTPSSTLAFPFNYSRNYAGNLSVPTGTAFPQAERA QGDDSFFRQRSLSETEASLTWDWDISPSQSVNSYLAYYKQSLNFFRPNLYYYNTDVLGGQAANGPTASGVGELQVGPVFR PYIEGQRFEVQSTYNVQLSPGQILSVGANFVQDRIYVQTNTDRDDFNVLTVSYQDVATSRTSIFIVDDISFSDLLKTNFG VRYTYSDQFGQILTPAAGVRVNLANNLSLRGNYSQVFNAPSLNNLYISTGTYGQNTGIPNPNLKPETGITFDVGVDYSPL RNLFVKLTYFSTYVDNTFQRRIFLNPNFTPGSTTESIIIDQTINLGSRRGNGIEFSADWRFADQWQLRAIWTNVDARPYG NYSDDIDSFTYPNFKEYQDYNIPYNSAIGALTYANKGLTATLLARYDDGKYRFRGDNSTRVPSWFTLDLNVEIPITPLFT LTGSVFNLTDTQYEYLDANPAPGTTFRIGGRFDIGG
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=151, Percent_Identity=31.7880794701987, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788478, Length=330, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI1790743, Length=155, Percent_Identity=32.9032258064516, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 100217; Mature: 100217
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRIGSGMESRFVSALVLLAGSFTVGWTSAVSAEVPPPVLARASAPEPIRAQDLLREHT CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHC GRQAIDLKAVPSAWDWTQPVIEPQVGQAPPAAPTPAPAATAEEPATAQQTDEGDFLDEVA CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH VTATRRPTRARDSTQSVNVIKREDFQAQGAVTVSDALLLIPGFNNSTPALGGQSNLSANF HHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEECCCCCCCCCCCCCCCCHHH LRGFGDTQYVVLRDGVRLGSPFNGRSDVSALVLDDLERIEVITGGSTLRYGSGSVGGVIN HHCCCCCEEEEEECCEECCCCCCCCCCCHHHHHCCCCEEEEEECCCEEEECCCCCCCEEE LITETPKGPPKLSLSYQYGSYSFNRFVGKYSGGDDTFSYNLIFTGIAAGNNYPFGFTLPT EEECCCCCCCCEEEEEECCCEEHHHHEEECCCCCCEEEEEEEEEEEECCCCCCEEEECCC SPQFYGPNDVVTGSSCVGPLGRACGDGSLPNGTNLYGFLKPEVGPPTKVQGINDLSHVGN CCCCCCCCCEECCCHHHCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCC DNYMGKFTFKPDTDNKLTLRLNQHNLSIGDRSPGYFDYNICGFFTGPTTTSNGTYFNNDF CCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCC GVAARFLPLNAQGQEVRCPVQTYLPVTPSSTLAFPFNYSRNYAGNLSVPTGTAFPQAERA CEEEEEEECCCCCCEEECCHHEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHC QGDDSFFRQRSLSETEASLTWDWDISPSQSVNSYLAYYKQSLNFFRPNLYYYNTDVLGGQ CCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC AANGPTASGVGELQVGPVFRPYIEGQRFEVQSTYNVQLSPGQILSVGANFVQDRIYVQTN CCCCCCCCCCCCEEECCEEHHHHCCCEEEEEEEEEEEECCCCEEECCHHHHEEEEEEEEC TDRDDFNVLTVSYQDVATSRTSIFIVDDISFSDLLKTNFGVRYTYSDQFGQILTPAAGVR CCCCCEEEEEEEEHHHCCCCEEEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCEE VNLANNLSLRGNYSQVFNAPSLNNLYISTGTYGQNTGIPNPNLKPETGITFDVGVDYSPL EEEECCEEECCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHH RNLFVKLTYFSTYVDNTFQRRIFLNPNFTPGSTTESIIIDQTINLGSRRGNGIEFSADWR HHHEEEEEEHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCC FADQWQLRAIWTNVDARPYGNYSDDIDSFTYPNFKEYQDYNIPYNSAIGALTYANKGLTA CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCEE TLLARYDDGKYRFRGDNSTRVPSWFTLDLNVEIPITPLFTLTGSVFNLTDTQYEYLDANP EEEEEECCCEEEEECCCCCCCCEEEEEEEEEEECCCEEEEECCCEEECCCCCEEEECCCC APGTTFRIGGRFDIGG CCCCEEEECCEECCCC >Mature Secondary Structure MNKRIGSGMESRFVSALVLLAGSFTVGWTSAVSAEVPPPVLARASAPEPIRAQDLLREHT CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHC GRQAIDLKAVPSAWDWTQPVIEPQVGQAPPAAPTPAPAATAEEPATAQQTDEGDFLDEVA CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH VTATRRPTRARDSTQSVNVIKREDFQAQGAVTVSDALLLIPGFNNSTPALGGQSNLSANF HHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEECCCCCCCCCCCCCCCCHHH LRGFGDTQYVVLRDGVRLGSPFNGRSDVSALVLDDLERIEVITGGSTLRYGSGSVGGVIN HHCCCCCEEEEEECCEECCCCCCCCCCCHHHHHCCCCEEEEEECCCEEEECCCCCCCEEE LITETPKGPPKLSLSYQYGSYSFNRFVGKYSGGDDTFSYNLIFTGIAAGNNYPFGFTLPT EEECCCCCCCCEEEEEECCCEEHHHHEEECCCCCCEEEEEEEEEEEECCCCCCEEEECCC SPQFYGPNDVVTGSSCVGPLGRACGDGSLPNGTNLYGFLKPEVGPPTKVQGINDLSHVGN CCCCCCCCCEECCCHHHCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCC DNYMGKFTFKPDTDNKLTLRLNQHNLSIGDRSPGYFDYNICGFFTGPTTTSNGTYFNNDF CCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCC GVAARFLPLNAQGQEVRCPVQTYLPVTPSSTLAFPFNYSRNYAGNLSVPTGTAFPQAERA CEEEEEEECCCCCCEEECCHHEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHC QGDDSFFRQRSLSETEASLTWDWDISPSQSVNSYLAYYKQSLNFFRPNLYYYNTDVLGGQ CCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC AANGPTASGVGELQVGPVFRPYIEGQRFEVQSTYNVQLSPGQILSVGANFVQDRIYVQTN CCCCCCCCCCCCEEECCEEHHHHCCCEEEEEEEEEEEECCCCEEECCHHHHEEEEEEEEC TDRDDFNVLTVSYQDVATSRTSIFIVDDISFSDLLKTNFGVRYTYSDQFGQILTPAAGVR CCCCCEEEEEEEEHHHCCCCEEEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCEE VNLANNLSLRGNYSQVFNAPSLNNLYISTGTYGQNTGIPNPNLKPETGITFDVGVDYSPL EEEECCEEECCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHH RNLFVKLTYFSTYVDNTFQRRIFLNPNFTPGSTTESIIIDQTINLGSRRGNGIEFSADWR HHHEEEEEEHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCC FADQWQLRAIWTNVDARPYGNYSDDIDSFTYPNFKEYQDYNIPYNSAIGALTYANKGLTA CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCEE TLLARYDDGKYRFRGDNSTRVPSWFTLDLNVEIPITPLFTLTGSVFNLTDTQYEYLDANP EEEEEECCCEEEEECCCCCCCCEEEEEEEEEEECCCEEEEECCCEEECCCCCEEEECCCC APGTTFRIGGRFDIGG CCCCEEEECCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA