| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is gufA [H]
Identifier: 37523849
GI number: 37523849
Start: 4505610
End: 4506392
Strand: Direct
Name: gufA [H]
Synonym: glr4280
Alternate gene names: 37523849
Gene position: 4505610-4506392 (Clockwise)
Preceding gene: 37523848
Following gene: 37523856
Centisome position: 96.71
GC content: 62.71
Gene sequence:
>783_bases ATGCACCCAGTCTTCCTCGGAACCTTCGCCAGTCTGATCGCCGGCCTCGCCACGGCTGTAGGGGCCTTGCCGGTGCTCTT TGCCCGCAAGCTCTCCCAGAAGACCCAGTCGATTTTGCTGGGTTTCGGCGGCGGGGTAATGCTCGCCGCTTCCGCTTTTT CGCTGATCGTGCCGGGCACGGATATTGCCGTCAAGCAGGGTTACTCCCGGCCCGTCGCGGCTCTGATCATGGCGGTCGGC ATTCTGCTGGGCGGCCTATTTTTGTGGCTGGCCAACCGCTACTTTCCCCACGAGCACTTCATCAAAGGCCCGGAGGGCGC CAACCCCAGTCCTGAGCGTCTCAAGCGCATCTGGTTATTCGTGGGGGCTATCGCCCTGCACAACTTTCCGGAGGGGATGG CGGTCGGCGTCAGCTTCGGGGGCGGCAGCATCGCCGAAGGTTTGCCGGTGGCGGTGGGCATCGGTCTGCAGAACATGCCC GAGGGGCTGGTGGTGGCCGTCGCCCTGTTGGGCCAGGGCTATTCGGTGGGCTACGCGCTGTGGGTGACGTTGCTTTCGGG TCTGGTCGAACCGATTGGCGGTCTACTGGGGGCGAGCGTGGTGAGTGTTTCCCAGGCGATCTTGCCCTGGGGGATGGCCT TTGCCGCCGGGGCGATGCTGTTTGTGATCAGCGACGAAATTATCCCGGAGTCGCATCGTCAGGGCTTTGACCTCGAAGGG ACGGTGGGGGTGATGGTGGGATTTGTGGTAATGATGTTTCTCGATATTGCCCTGGGCAGCTAA
Upstream 100 bases:
>100_bases TTTGCGTTACGCTCGGCTCGGCCTCGTTGTCGCCACGCGGCAGGTGCTGGCCACTACCCTCACCCTGCTCGGCATCGAGC CGCGCGAATCGATGTAGGCC
Downstream 100 bases:
>100_bases AAAACTTACCAGCTAAATCGGGCGTTGTTGCCGGTGCGGGGGGGGGGACTGAGTACCGCCGCTGCGCTGCCCAGGGCCAT CACCTGCCCAAACTCCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MHPVFLGTFASLIAGLATAVGALPVLFARKLSQKTQSILLGFGGGVMLAASAFSLIVPGTDIAVKQGYSRPVAALIMAVG ILLGGLFLWLANRYFPHEHFIKGPEGANPSPERLKRIWLFVGAIALHNFPEGMAVGVSFGGGSIAEGLPVAVGIGLQNMP EGLVVAVALLGQGYSVGYALWVTLLSGLVEPIGGLLGASVVSVSQAILPWGMAFAAGAMLFVISDEIIPESHRQGFDLEG TVGVMVGFVVMMFLDIALGS
Sequences:
>Translated_260_residues MHPVFLGTFASLIAGLATAVGALPVLFARKLSQKTQSILLGFGGGVMLAASAFSLIVPGTDIAVKQGYSRPVAALIMAVG ILLGGLFLWLANRYFPHEHFIKGPEGANPSPERLKRIWLFVGAIALHNFPEGMAVGVSFGGGSIAEGLPVAVGIGLQNMP EGLVVAVALLGQGYSVGYALWVTLLSGLVEPIGGLLGASVVSVSQAILPWGMAFAAGAMLFVISDEIIPESHRQGFDLEG TVGVMVGFVVMMFLDIALGS >Mature_260_residues MHPVFLGTFASLIAGLATAVGALPVLFARKLSQKTQSILLGFGGGVMLAASAFSLIVPGTDIAVKQGYSRPVAALIMAVG ILLGGLFLWLANRYFPHEHFIKGPEGANPSPERLKRIWLFVGAIALHNFPEGMAVGVSFGGGSIAEGLPVAVGIGLQNMP EGLVVAVALLGQGYSVGYALWVTLLSGLVEPIGGLLGASVVSVSQAILPWGMAFAAGAMLFVISDEIIPESHRQGFDLEG TVGVMVGFVVMMFLDIALGS
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577422, Length=159, Percent_Identity=45.2830188679245, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI229577418, Length=159, Percent_Identity=45.2830188679245, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI187936949, Length=149, Percent_Identity=27.5167785234899, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI55741750, Length=149, Percent_Identity=27.5167785234899, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789419, Length=249, Percent_Identity=30.9236947791165, Blast_Score=71, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17507805, Length=319, Percent_Identity=33.2288401253918, Blast_Score=151, Evalue=3e-37, Organism=Drosophila melanogaster, GI24652846, Length=164, Percent_Identity=46.9512195121951, Blast_Score=141, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 26858; Mature: 26858
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPVFLGTFASLIAGLATAVGALPVLFARKLSQKTQSILLGFGGGVMLAASAFSLIVPGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCC DIAVKQGYSRPVAALIMAVGILLGGLFLWLANRYFPHEHFIKGPEGANPSPERLKRIWLF CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHH VGAIALHNFPEGMAVGVSFGGGSIAEGLPVAVGIGLQNMPEGLVVAVALLGQGYSVGYAL HHHHHHHCCCCCEEEEEECCCCCHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH WVTLLSGLVEPIGGLLGASVVSVSQAILPWGMAFAAGAMLFVISDEIIPESHRQGFDLEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCHHCCCCCCCC TVGVMVGFVVMMFLDIALGS HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHPVFLGTFASLIAGLATAVGALPVLFARKLSQKTQSILLGFGGGVMLAASAFSLIVPGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCC DIAVKQGYSRPVAALIMAVGILLGGLFLWLANRYFPHEHFIKGPEGANPSPERLKRIWLF CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHH VGAIALHNFPEGMAVGVSFGGGSIAEGLPVAVGIGLQNMPEGLVVAVALLGQGYSVGYAL HHHHHHHCCCCCEEEEEECCCCCHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH WVTLLSGLVEPIGGLLGASVVSVSQAILPWGMAFAAGAMLFVISDEIIPESHRQGFDLEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCHHCCCCCCCC TVGVMVGFVVMMFLDIALGS HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]