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The map label for this gene is 37523842

Identifier: 37523842

GI number: 37523842

Start: 4494290

End: 4494985

Strand: Direct

Name: 37523842

Synonym: glr4273

Alternate gene names: NA

Gene position: 4494290-4494985 (Clockwise)

Preceding gene: 37523841

Following gene: 37523846

Centisome position: 96.46

GC content: 59.77

Gene sequence:

>696_bases
GTGAGGAGTCTATCCATGCGAATCCATCCGTTTTCACAATCGCAAGTCACCGGTCTTTGTGCCCAGCTGGGGATGGGTCT
GGCGCTGTTGGCCCCCTTTGGCGCCCTCGCTTCCGGTACGACCTTTGCCTATGCAGTCCCGGCGCCCCAGGCCGATTCCG
TCTCTGCCCAGCGACTCGTCCAGGCTAAAATAGACATTGTCGATACATTGGTGGCCAATGGTTCGTTCACGACGCTGGTG
CAGTTGGTCAAACAGGTCGGTATCGTCGAAGACTTGCGAGGCTTCGGACGGTTTACGGTCTTCGCACCGGACGACAATGC
CTTTGCCGCTGTGCCTCCCGATGTGCTCCAGATTCTCAAAAGCGACAGTGCCCTACTCGCCAGGGTACTCACCTACCACG
TCGTCTCCGATACCGCACCGTTTCTGGCGGCCCAACTGCGCGACTCGAAACCCCTGCGCACCCTGGAGCGCTCAGAATTG
AAGTTTACCGCCCGCGACGGCGGCTTGTACGTCAATGACGCCCGGGTGCTGCAGGCGGACATCACGGCCACCAACGGCGT
CATTCACAAAATCGACAAGGTGTTGGTACCCGAAGCCGTCATGGTCGACATTCGCAAGCGCCAGCAGATGATGAAGCCGG
TGCCCTCCGTACCGCCGGTGCCGTCTGTGACGCCCGTCCCGTCCATTCCTAAATAG

Upstream 100 bases:

>100_bases
CTGGTTGCGCTCCGGGATGTGGGCGCTCGCGATGACCTGTATCGCAGGGCTGATGGCAATCGCTCTAGGTATGCTTGGAT
AGTCTGAGTTGCTCTACGTA

Downstream 100 bases:

>100_bases
ACAGCTGCGTCCGCTTCAGCTGGACACGAGCAACCGCTCCTGCATGCCGAACGCGGTAACCACCGCTTCGATGAGGCCGC
GTTCGCTCTCGCTGAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MRSLSMRIHPFSQSQVTGLCAQLGMGLALLAPFGALASGTTFAYAVPAPQADSVSAQRLVQAKIDIVDTLVANGSFTTLV
QLVKQVGIVEDLRGFGRFTVFAPDDNAFAAVPPDVLQILKSDSALLARVLTYHVVSDTAPFLAAQLRDSKPLRTLERSEL
KFTARDGGLYVNDARVLQADITATNGVIHKIDKVLVPEAVMVDIRKRQQMMKPVPSVPPVPSVTPVPSIPK

Sequences:

>Translated_231_residues
MRSLSMRIHPFSQSQVTGLCAQLGMGLALLAPFGALASGTTFAYAVPAPQADSVSAQRLVQAKIDIVDTLVANGSFTTLV
QLVKQVGIVEDLRGFGRFTVFAPDDNAFAAVPPDVLQILKSDSALLARVLTYHVVSDTAPFLAAQLRDSKPLRTLERSEL
KFTARDGGLYVNDARVLQADITATNGVIHKIDKVLVPEAVMVDIRKRQQMMKPVPSVPPVPSVTPVPSIPK
>Mature_231_residues
MRSLSMRIHPFSQSQVTGLCAQLGMGLALLAPFGALASGTTFAYAVPAPQADSVSAQRLVQAKIDIVDTLVANGSFTTLV
QLVKQVGIVEDLRGFGRFTVFAPDDNAFAAVPPDVLQILKSDSALLARVLTYHVVSDTAPFLAAQLRDSKPLRTLERSEL
KFTARDGGLYVNDARVLQADITATNGVIHKIDKVLVPEAVMVDIRKRQQMMKPVPSVPPVPSVTPVPSIPK

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=136, Percent_Identity=34.5588235294118, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 24784; Mature: 24784

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLSMRIHPFSQSQVTGLCAQLGMGLALLAPFGALASGTTFAYAVPAPQADSVSAQRLV
CCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
QAKIDIVDTLVANGSFTTLVQLVKQVGIVEDLRGFGRFTVFAPDDNAFAAVPPDVLQILK
HHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCCCEEEECCCCCCEEECCHHHHHHHC
SDSALLARVLTYHVVSDTAPFLAAQLRDSKPLRTLERSELKFTARDGGLYVNDARVLQAD
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHEEEEECCCCEEECCCEEEEEC
ITATNGVIHKIDKVLVPEAVMVDIRKRQQMMKPVPSVPPVPSVTPVPSIPK
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSLSMRIHPFSQSQVTGLCAQLGMGLALLAPFGALASGTTFAYAVPAPQADSVSAQRLV
CCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
QAKIDIVDTLVANGSFTTLVQLVKQVGIVEDLRGFGRFTVFAPDDNAFAAVPPDVLQILK
HHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCCCEEEECCCCCCEEECCHHHHHHHC
SDSALLARVLTYHVVSDTAPFLAAQLRDSKPLRTLERSELKFTARDGGLYVNDARVLQAD
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHEEEEECCCCEEECCCEEEEEC
ITATNGVIHKIDKVLVPEAVMVDIRKRQQMMKPVPSVPPVPSVTPVPSIPK
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]