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The map label for this gene is secF [H]

Identifier: 37523736

GI number: 37523736

Start: 4365644

End: 4366570

Strand: Direct

Name: secF [H]

Synonym: gvip550

Alternate gene names: 37523736

Gene position: 4365644-4366570 (Clockwise)

Preceding gene: 37523735

Following gene: 37523741

Centisome position: 93.7

GC content: 62.14

Gene sequence:

>927_bases
ATGAAAATTGAAGTCGCCAAGAGCAAGTCCAAGTGGTTTACCGCCTCCGGCATCGGACTGGGTATCGGTCTTGTCGCCAT
GGTCATTTCGCTGCTCACCCTGGGCAGTCCCCTGCGTTTGGGCCTCGACTTCACCGGCGGCACGCTGCTGCAGCTGAAAT
TTGTGAAGGCGATTCCAGACATCGCCAAGGTGCGCGCCGAGGTGGGCGAGGCGGGCTATCCCAACAGTGTCGTCCAGCAA
ATCGGCTCAGACACTATCGCCGTGCGTACCCGGCCCCTCAGCCAGCCGGAGCGCAGCAAGCTTCAGGACGCCCTGAAAGC
CGATCTGGGCAACTTTCAGCTGGAGCGCATCGAGAGCGTCGGCCCCACCCTCGGCCAGGAACTGCTATTTAACGGCCTGT
TGTCGCTGGCCCTCGCCCTGGCGGCCATCCTCGTCTACCTGGCCTTTCGCTTTCAGCTCGACTACGCCATTTGCGCCGCC
GTCGCCATGTTCCACAACGTCATTGCGACGATGGGCGTCTTCGCCATTCTGGGACTGCTTTTGGGCATCGAAGTCGACAC
GCTCTTCGTGGTCGCCATCCTCACGATCGTGGGCTTCTCGGTGCAGGACACCGTGGTCGTTTTCGACCGCGTGCGCGAAA
ATCTGAAGTTCCTCTCGCGCAAGAAACCCTTCCCCGACATCGTCAACGACTCGGTCAACCAGACCTGGGTGCGCTCGGTC
AACAACAACATCGCCGCCCTGCTGGTGCTGCTGCCGCTGTCGATCTTCGGCGGCGAGAGTATCCGCTACTTCGCCCTGGC
GCTGATCATCGGCTTTGTAGTGGGCACCTACTCCAGCATCTTCATCGCGGCGGCCCTGCTGGTCTGGTGGCGCGAGCGCC
AGACGGTGGGTGCGACAGGAGCCGGGGCGGCCAAAGCCGAGCGCTAA

Upstream 100 bases:

>100_bases
CCTGCTCGCGCACCTTTTTGCTGACGATCTTGAATTTTCCCGCGCTGCGCAAACCGGCGCTTTTCGGGGTTAGTGACGTT
CCTGCCAAGGCGGTGCGCCC

Downstream 100 bases:

>100_bases
GGGCATGGGCGTTGCCCTGCTGCAACATTGCCTCCCCAGGCCGTGCGTCGGGTTCGATTAATGGGCAATCAGCAGCGAGC
ACGGCGCGTGGCGCAGGACA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKIEVAKSKSKWFTASGIGLGIGLVAMVISLLTLGSPLRLGLDFTGGTLLQLKFVKAIPDIAKVRAEVGEAGYPNSVVQQ
IGSDTIAVRTRPLSQPERSKLQDALKADLGNFQLERIESVGPTLGQELLFNGLLSLALALAAILVYLAFRFQLDYAICAA
VAMFHNVIATMGVFAILGLLLGIEVDTLFVVAILTIVGFSVQDTVVVFDRVRENLKFLSRKKPFPDIVNDSVNQTWVRSV
NNNIAALLVLLPLSIFGGESIRYFALALIIGFVVGTYSSIFIAAALLVWWRERQTVGATGAGAAKAER

Sequences:

>Translated_308_residues
MKIEVAKSKSKWFTASGIGLGIGLVAMVISLLTLGSPLRLGLDFTGGTLLQLKFVKAIPDIAKVRAEVGEAGYPNSVVQQ
IGSDTIAVRTRPLSQPERSKLQDALKADLGNFQLERIESVGPTLGQELLFNGLLSLALALAAILVYLAFRFQLDYAICAA
VAMFHNVIATMGVFAILGLLLGIEVDTLFVVAILTIVGFSVQDTVVVFDRVRENLKFLSRKKPFPDIVNDSVNQTWVRSV
NNNIAALLVLLPLSIFGGESIRYFALALIIGFVVGTYSSIFIAAALLVWWRERQTVGATGAGAAKAER
>Mature_308_residues
MKIEVAKSKSKWFTASGIGLGIGLVAMVISLLTLGSPLRLGLDFTGGTLLQLKFVKAIPDIAKVRAEVGEAGYPNSVVQQ
IGSDTIAVRTRPLSQPERSKLQDALKADLGNFQLERIESVGPTLGQELLFNGLLSLALALAAILVYLAFRFQLDYAICAA
VAMFHNVIATMGVFAILGLLLGIEVDTLFVVAILTIVGFSVQDTVVVFDRVRENLKFLSRKKPFPDIVNDSVNQTWVRSV
NNNIAALLVLLPLSIFGGESIRYFALALIIGFVVGTYSSIFIAAALLVWWRERQTVGATGAGAAKAER

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=253, Percent_Identity=35.9683794466403, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33181; Mature: 33181

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEVAKSKSKWFTASGIGLGIGLVAMVISLLTLGSPLRLGLDFTGGTLLQLKFVKAIPD
CCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEECEECCCCHHHHHHHHHHCHH
IAKVRAEVGEAGYPNSVVQQIGSDTIAVRTRPLSQPERSKLQDALKADLGNFQLERIESV
HHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
GPTLGQELLFNGLLSLALALAAILVYLAFRFQLDYAICAAVAMFHNVIATMGVFAILGLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIEVDTLFVVAILTIVGFSVQDTVVVFDRVRENLKFLSRKKPFPDIVNDSVNQTWVRSV
HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHH
NNNIAALLVLLPLSIFGGESIRYFALALIIGFVVGTYSSIFIAAALLVWWRERQTVGATG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGAAKAER
CCCCCCCC
>Mature Secondary Structure
MKIEVAKSKSKWFTASGIGLGIGLVAMVISLLTLGSPLRLGLDFTGGTLLQLKFVKAIPD
CCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEECEECCCCHHHHHHHHHHCHH
IAKVRAEVGEAGYPNSVVQQIGSDTIAVRTRPLSQPERSKLQDALKADLGNFQLERIESV
HHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
GPTLGQELLFNGLLSLALALAAILVYLAFRFQLDYAICAAVAMFHNVIATMGVFAILGLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIEVDTLFVVAILTIVGFSVQDTVVVFDRVRENLKFLSRKKPFPDIVNDSVNQTWVRSV
HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHH
NNNIAALLVLLPLSIFGGESIRYFALALIIGFVVGTYSSIFIAAALLVWWRERQTVGATG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGAAKAER
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]