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The map label for this gene is yhgF [C]

Identifier: 37523713

GI number: 37523713

Start: 4344133

End: 4346301

Strand: Direct

Name: yhgF [C]

Synonym: glr4144

Alternate gene names: 37523713

Gene position: 4344133-4346301 (Clockwise)

Preceding gene: 37523711

Following gene: 37523714

Centisome position: 93.24

GC content: 64.32

Gene sequence:

>2169_bases
ATGGCTTCGAATCTTGTCCAAGTGCTGGCGCGGGAATTCTCCCTCGCCCCGACCCAGGTGGAAAACACCCTCAAACTCTT
TGCCGAGGGAGCGACAGTCCCGTTTGTGGCCCGCTACCGCAAGGAGCGCACCGGCGGCCTGAACGAGGTGCAACTGCGCG
AACTGGCCGAGCGGCACGCTTACCTGGGTGAACTGGAGGAGCGCAAGACGGTTATCCTCGCGAGTATCGGCGAGCAGGAC
AAGCTCACCGACGAGCTGACAAAACGCATCGTTCAATGCGGAACAAAGAGCGAACTGGAGGATCTCTACCTGCCCTTTCG
GCCCAAACGGCGCACCCGCGCCGCCGCGGCGCGCGAGAAGGGGCTGGAGCCTCTCGCTGATCGGCTTGCCGCCCTCAATC
GCCCCGACGCTCCGGCGGTCGACCTGGAAGCTGAGGCGGTAAAGTACGTGGGCGAAGCGGTGGCAAGCGCCGAGGAAGCC
CTCGCGGGAGCTGCGGACATTCTGGCGGAGGCGGCAGCCGAGCGGGCGCCTTTGCGCGCCTGGGTGCGCGCATATCTGCT
CAAATCCGGGCATTTCGCCGCCCGCATCAAGCCGGACTTCCCGCCGGGCTCCACCAAGTTCGAGATGTACCGCGATTACC
GAATAGCGGTGCGCAGTGTCGCTCCCCACAATCTGCTCGCGCTGTTTCGGGGTGAGGCGGAAGGGGTGATCGCGCTGGAT
CTGGAGTTCGACGAGCGCGCTGTGCTCGACTATCTCGAGGCGCGCGAAATCCGCACCCGCGAGCCGGCCTTGCGCCGCTT
CTGGCAGCAGATGCTCCAGGACGCCTTCGAGCGGTTGTTCAAAAATGCTTTGACCGGCGAAGTGCGCGCCCTCAAAAAGC
AAGAAGCCGACCTCGCCTCGATTCAGACTTTTGAGGCCAACTTGCGCGAATTGCTCCTGGCGAGCCCCGCCGGCCGATTG
CCGACCTTGGCCATCGATCCGGGTTTTCGCACCGGCTGCAAAGTGGCGGTCCTCGGCCCCACGGGCACCTTTATCGAGTA
CCAGGCAATTTTTCCTCACCAGGGGGCAGGCCAGCGCGCCCAGGCGGCGCGGGTGCTGCAAGATCTGATCACCCGCCACC
GCATCGGGCTGATTGCCGTCGGCAACGGCACCGGTGGCCGCGAGACCGACGCCTTTGTGGGTGAGGTAATTGCTGCGCTC
GATCCGCAGCCCCTCAAGGTGATGGTGAGCGAGGCGGGGGCGTCGATTTATTCGGCGAGCGCAGTGGCCGCCGCCGAATT
TCCGGACCTCGACGTGACGGTACGCGGGGCAATCAGCATCGGCAGGCGGCTGCAAGACCCGCTCGCCGAACTGGTCAAAA
TCGATCCCAAGTCGATCGGCGTCGGCCAGTACCAGCACGACGTCGATCAAAAATTGCTCAAGCGCAAGCTCGATGAGACG
GTCGAAAGCTGCGTCAACCACGTCGGAGTCGACCTCAACACCGCCTCGGCCGAACTGCTGACGTTTGTGGCGGGGATCGG
GGTTGCCGTCGCCCACAACATCGTGATCTACCGCGACACCCACGGCCCGTATAAAAACCGCCGCGCACTGCTCAAGGTCA
CCAAGCTTGGCCCCAAAGCCTTCGAGCAGGCGGCCGGTTTCCTGCGCATCCGCGACGGCGACAACCCCCTCGACAACACA
GCAGTCCACCCGGAGAGCTATCCGGTGGTCCGGGCGATGGCGAGCGATCTGGGCATTCCCCTCGACCGCATCGCCGAGAT
TCCCAAACACTTGCAGTCGGCTGATCTAAACCGCTACGCCGGTCCCACCGTCGGCGAGCCCACGCTGCGCGACATTCTGG
CCGAACTCGAAAAACCCGGCCGCGACCCGCGCGCCGCCTTCCAGTACGCCACCTTCAAAGAGGGCGTCAACGCACTCAAA
GATCTGGTCGTCGGTATGGAACTGGAGGGAGTGGTCACCAACGTCACCAACTTCGGCGCCTTTGTCGACATCGGTGTGCA
TCAGGACGGACTGGTGCACGTCTCGCAACTGGCCGACCGCTTCGTGGCCGATCCGAAGGCCGTTGTCAAAGTCGGGCAAA
TTGTCCGGGTGCGCGTGCTGGAGGTGAACACAGCCTTAGGCCGCATCGGTCTGTCGATGCGGCAGGCGGGGGCGCCGCCG
CGGCGCTAA

Upstream 100 bases:

>100_bases
CTTGGCTGTTAAGGACAATTGTACACAATGCTGCGGGAGGCGGCAAGGTGGACGGCTAAAATGGCTGGGCAGAAACAGCA
TGACACAATAATCCGGCTCC

Downstream 100 bases:

>100_bases
AGCGGGTCTACGATGAAATGTGCGTTTCTGGAGACCCCCATGCGCCCCTCGCCATCCGACGACGACGGCCTGCCGCGCGG
CAACCCCGCCTGGTTCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 721

Protein sequence:

>722_residues
MASNLVQVLAREFSLAPTQVENTLKLFAEGATVPFVARYRKERTGGLNEVQLRELAERHAYLGELEERKTVILASIGEQD
KLTDELTKRIVQCGTKSELEDLYLPFRPKRRTRAAAAREKGLEPLADRLAALNRPDAPAVDLEAEAVKYVGEAVASAEEA
LAGAADILAEAAAERAPLRAWVRAYLLKSGHFAARIKPDFPPGSTKFEMYRDYRIAVRSVAPHNLLALFRGEAEGVIALD
LEFDERAVLDYLEAREIRTREPALRRFWQQMLQDAFERLFKNALTGEVRALKKQEADLASIQTFEANLRELLLASPAGRL
PTLAIDPGFRTGCKVAVLGPTGTFIEYQAIFPHQGAGQRAQAARVLQDLITRHRIGLIAVGNGTGGRETDAFVGEVIAAL
DPQPLKVMVSEAGASIYSASAVAAAEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKRKLDET
VESCVNHVGVDLNTASAELLTFVAGIGVAVAHNIVIYRDTHGPYKNRRALLKVTKLGPKAFEQAAGFLRIRDGDNPLDNT
AVHPESYPVVRAMASDLGIPLDRIAEIPKHLQSADLNRYAGPTVGEPTLRDILAELEKPGRDPRAAFQYATFKEGVNALK
DLVVGMELEGVVTNVTNFGAFVDIGVHQDGLVHVSQLADRFVADPKAVVKVGQIVRVRVLEVNTALGRIGLSMRQAGAPP
RR

Sequences:

>Translated_722_residues
MASNLVQVLAREFSLAPTQVENTLKLFAEGATVPFVARYRKERTGGLNEVQLRELAERHAYLGELEERKTVILASIGEQD
KLTDELTKRIVQCGTKSELEDLYLPFRPKRRTRAAAAREKGLEPLADRLAALNRPDAPAVDLEAEAVKYVGEAVASAEEA
LAGAADILAEAAAERAPLRAWVRAYLLKSGHFAARIKPDFPPGSTKFEMYRDYRIAVRSVAPHNLLALFRGEAEGVIALD
LEFDERAVLDYLEAREIRTREPALRRFWQQMLQDAFERLFKNALTGEVRALKKQEADLASIQTFEANLRELLLASPAGRL
PTLAIDPGFRTGCKVAVLGPTGTFIEYQAIFPHQGAGQRAQAARVLQDLITRHRIGLIAVGNGTGGRETDAFVGEVIAAL
DPQPLKVMVSEAGASIYSASAVAAAEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKRKLDET
VESCVNHVGVDLNTASAELLTFVAGIGVAVAHNIVIYRDTHGPYKNRRALLKVTKLGPKAFEQAAGFLRIRDGDNPLDNT
AVHPESYPVVRAMASDLGIPLDRIAEIPKHLQSADLNRYAGPTVGEPTLRDILAELEKPGRDPRAAFQYATFKEGVNALK
DLVVGMELEGVVTNVTNFGAFVDIGVHQDGLVHVSQLADRFVADPKAVVKVGQIVRVRVLEVNTALGRIGLSMRQAGAPP
RR
>Mature_721_residues
ASNLVQVLAREFSLAPTQVENTLKLFAEGATVPFVARYRKERTGGLNEVQLRELAERHAYLGELEERKTVILASIGEQDK
LTDELTKRIVQCGTKSELEDLYLPFRPKRRTRAAAAREKGLEPLADRLAALNRPDAPAVDLEAEAVKYVGEAVASAEEAL
AGAADILAEAAAERAPLRAWVRAYLLKSGHFAARIKPDFPPGSTKFEMYRDYRIAVRSVAPHNLLALFRGEAEGVIALDL
EFDERAVLDYLEAREIRTREPALRRFWQQMLQDAFERLFKNALTGEVRALKKQEADLASIQTFEANLRELLLASPAGRLP
TLAIDPGFRTGCKVAVLGPTGTFIEYQAIFPHQGAGQRAQAARVLQDLITRHRIGLIAVGNGTGGRETDAFVGEVIAALD
PQPLKVMVSEAGASIYSASAVAAAEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKRKLDETV
ESCVNHVGVDLNTASAELLTFVAGIGVAVAHNIVIYRDTHGPYKNRRALLKVTKLGPKAFEQAAGFLRIRDGDNPLDNTA
VHPESYPVVRAMASDLGIPLDRIAEIPKHLQSADLNRYAGPTVGEPTLRDILAELEKPGRDPRAAFQYATFKEGVNALKD
LVVGMELEGVVTNVTNFGAFVDIGVHQDGLVHVSQLADRFVADPKAVVKVGQIVRVRVLEVNTALGRIGLSMRQAGAPPR
R

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=797, Percent_Identity=32.6223337515684, Blast_Score=373, Evalue=1e-103,
Organism=Homo sapiens, GI27597090, Length=402, Percent_Identity=26.3681592039801, Blast_Score=98, Evalue=2e-20,
Organism=Escherichia coli, GI87082262, Length=733, Percent_Identity=50.0682128240109, Blast_Score=639, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=97, Percent_Identity=37.1134020618557, Blast_Score=69, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=710, Percent_Identity=28.4507042253521, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17552892, Length=265, Percent_Identity=32.4528301886792, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI62484314, Length=752, Percent_Identity=32.4468085106383, Blast_Score=373, Evalue=1e-103,
Organism=Drosophila melanogaster, GI24640080, Length=505, Percent_Identity=21.980198019802, Blast_Score=94, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 78826; Mature: 78695

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNLVQVLAREFSLAPTQVENTLKLFAEGATVPFVARYRKERTGGLNEVQLRELAERHA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
YLGELEERKTVILASIGEQDKLTDELTKRIVQCGTKSELEDLYLPFRPKRRTRAAAAREK
HHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHC
GLEPLADRLAALNRPDAPAVDLEAEAVKYVGEAVASAEEALAGAADILAEAAAERAPLRA
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVRAYLLKSGHFAARIKPDFPPGSTKFEMYRDYRIAVRSVAPHNLLALFRGEAEGVIALD
HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHEECCCCCEEEEE
LEFDERAVLDYLEAREIRTREPALRRFWQQMLQDAFERLFKNALTGEVRALKKQEADLAS
ECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQTFEANLRELLLASPAGRLPTLAIDPGFRTGCKVAVLGPTGTFIEYQAIFPHQGAGQRA
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHH
QAARVLQDLITRHRIGLIAVGNGTGGRETDAFVGEVIAALDPQPLKVMVSEAGASIYSAS
HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH
AVAAAEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKRKLDET
HHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VESCVNHVGVDLNTASAELLTFVAGIGVAVAHNIVIYRDTHGPYKNRRALLKVTKLGPKA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCHHH
FEQAAGFLRIRDGDNPLDNTAVHPESYPVVRAMASDLGIPLDRIAEIPKHLQSADLNRYA
HHHHCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCC
GPTVGEPTLRDILAELEKPGRDPRAAFQYATFKEGVNALKDLVVGMELEGVVTNVTNFGA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
FVDIGVHQDGLVHVSQLADRFVADPKAVVKVGQIVRVRVLEVNTALGRIGLSMRQAGAPP
EEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCCCC
RR
CC
>Mature Secondary Structure 
ASNLVQVLAREFSLAPTQVENTLKLFAEGATVPFVARYRKERTGGLNEVQLRELAERHA
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
YLGELEERKTVILASIGEQDKLTDELTKRIVQCGTKSELEDLYLPFRPKRRTRAAAAREK
HHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHC
GLEPLADRLAALNRPDAPAVDLEAEAVKYVGEAVASAEEALAGAADILAEAAAERAPLRA
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVRAYLLKSGHFAARIKPDFPPGSTKFEMYRDYRIAVRSVAPHNLLALFRGEAEGVIALD
HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHEECCCCCEEEEE
LEFDERAVLDYLEAREIRTREPALRRFWQQMLQDAFERLFKNALTGEVRALKKQEADLAS
ECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQTFEANLRELLLASPAGRLPTLAIDPGFRTGCKVAVLGPTGTFIEYQAIFPHQGAGQRA
HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHHH
QAARVLQDLITRHRIGLIAVGNGTGGRETDAFVGEVIAALDPQPLKVMVSEAGASIYSAS
HHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH
AVAAAEFPDLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKRKLDET
HHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VESCVNHVGVDLNTASAELLTFVAGIGVAVAHNIVIYRDTHGPYKNRRALLKVTKLGPKA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCHHH
FEQAAGFLRIRDGDNPLDNTAVHPESYPVVRAMASDLGIPLDRIAEIPKHLQSADLNRYA
HHHHCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCC
GPTVGEPTLRDILAELEKPGRDPRAAFQYATFKEGVNALKDLVVGMELEGVVTNVTNFGA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
FVDIGVHQDGLVHVSQLADRFVADPKAVVKVGQIVRVRVLEVNTALGRIGLSMRQAGAPP
EEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCCCC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]