| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is hflX [H]
Identifier: 37523711
GI number: 37523711
Start: 4341864
End: 4343624
Strand: Direct
Name: hflX [H]
Synonym: glr4142
Alternate gene names: 37523711
Gene position: 4341864-4343624 (Clockwise)
Preceding gene: 37523710
Following gene: 37523713
Centisome position: 93.19
GC content: 64.96
Gene sequence:
>1761_bases GTGGCCATCGATTCCACGATTACCGCTTTCAGAGAACCAGCCATAGACAAAATCTACGGTCCGCACAAAGGTCTCAAGCC TGCCCAACTAAGGCAACTCAGCCGCCTGTACAGCCGGCCGTTCCCCGTGAACCGCTTTTTGAGCCCTGAGTTTGCTGAGC GGCTGGCCGCCCTGAGTGCGGAGCTGGAGACGCCCCTGTGCGTCTACGCCAACCGCAGAGGCCAGGTGGTGCGCGTCGGT GTCGGCACCCCCAAAGAAACCCAATTTTCGCCGGACGAACTGCCGCGCCAGGGTGCCGAGCGCCTGAGCGGCCTGCGCTG CGTGGCGACCCGCCTCGATGGCGACGGCCCCAGCCGCGGCGATCTCACCGCCCTTGCCCTGCAGCGGCTCGACGCGCTGG TGATTCTCGATGTGGCCATCCAGGGCTATCGGCGCCAGGGCGGCGGGCTGAGCGGCTTTGTCCAGCGCGTGCACATCGCC AACCTGGTGCCGGACCCGCTCGCCAAGTGGGTAGTCTCGACGCCCCAACCGCTGGGCCAGGTGAGCAACCAGGACTTTGA CGAATTTCTAGGCGATCTCGAAGACGAATTTCGCCGGGAGTGGACGGCGCGGGTAGTCGAGAGCGACCGCGAGCGGGTGC TGCTCATCGACTTTTTCTCGACGCGCACCAGCCAGCGCGCCATGGAAGAAGAACTCTCCGAACTGGTGCAACTGGTCACC AGTGCAGGCGGCGAGGTACTCAAAGTCTTTTACCAGCGCCGTGAACAGCCCGACCCCTCGACTTTGATCGGTCGGGGCAA ACTCGAAGAAGTAGCCCTGAGCGTCCAGGAACTGGGGGCCAATCTGGTCGTCTGCGGACGCGAACTGACCTCCAGCCAGG CGCGCAACCTGGAACTCGCCCTGGGGGTGCGCGTGGTGGACCGTACCGAACTGATTCTCGATATTTTTGCCCGCCGCGCC CGCTCCCACGAGGGCAAGCTGCAGGTGGAACTGGCCCAGTTGCAATATCTGATGCCGCGCCTGACGGGCAAGGGCGAGGC CCTCTCGCGCTTGGGCGGCGGCATCGGCACCCGCGGCCCCGGTGAAACAAAACTGGAGACCGACCGGCGGGTGATCCGCC GCCGGATCGCCAAATTGCAGGGCGAAGTGGATGACCTTCAGGCCCACCGCGCCCGCATGCGCGCCCGCCGCCAGCGCAAG GAAGTGCCCGTCTTCGCCCTGGTGGGCTATACCAACGCCGGCAAATCGACCCTGCTCAACGCCCTCACCGGCGCCGGAAC CCTGGTGGCGGACCAACTGTTTGCCACCCTCGATCCGACCACGCGCCGCCTGGAGTTGCCCACCGGCGACGCGGTGCTGC TCACAGACACGGTCGGCTTCGTCCACGATCTGCCGCCGCAGCTCATCGACGCCTTTCGGGCCACCCTCGAAGAAGTCACC GAGGCCGACGCCCTGCTGCACGTGGTCGATCTGTCCAACCCGGCCTGGATGAACCATATCCAGGCGGTGCAGCACATCCT CGAAAGCCTGCCCATCGCCACCGGACCGCAACTATTGGTCTTCAACAAAGTCGACCGGGTCAGCTCCCAGGTACGCGCCT TCGCCGAGCAGGAATATCCCCTCGCGATCTTCATCTCCGCCAAGAACGGCTGGGGATTTTTGGCGCTGCGCGAGGCGCTC ACCCGCTGGATGCGTTCGCTGAGTGATTTATGGCCGCCCATGGCCGAATCGGGCACAGGCGGCGAAACGGACCTCAATTA A
Upstream 100 bases:
>100_bases TAAAAAATTGACGGTAGCGCGACCGCATTTTTGCGCGATCAACGATATCGACCAACACACCTCAATACCCTGGGGATCGC CTCGGTGAGGTGGTTATAAT
Downstream 100 bases:
>100_bases ATTCGAGAATCTCGTCTTCGCTGATCTCGCTTTCTTCGAGCAACGCGAGGGCGGGACGGGCTTTCTCGCGCGCCAGGCGG TACTGCTGGCGCAGTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MAIDSTITAFREPAIDKIYGPHKGLKPAQLRQLSRLYSRPFPVNRFLSPEFAERLAALSAELETPLCVYANRRGQVVRVG VGTPKETQFSPDELPRQGAERLSGLRCVATRLDGDGPSRGDLTALALQRLDALVILDVAIQGYRRQGGGLSGFVQRVHIA NLVPDPLAKWVVSTPQPLGQVSNQDFDEFLGDLEDEFRREWTARVVESDRERVLLIDFFSTRTSQRAMEEELSELVQLVT SAGGEVLKVFYQRREQPDPSTLIGRGKLEEVALSVQELGANLVVCGRELTSSQARNLELALGVRVVDRTELILDIFARRA RSHEGKLQVELAQLQYLMPRLTGKGEALSRLGGGIGTRGPGETKLETDRRVIRRRIAKLQGEVDDLQAHRARMRARRQRK EVPVFALVGYTNAGKSTLLNALTGAGTLVADQLFATLDPTTRRLELPTGDAVLLTDTVGFVHDLPPQLIDAFRATLEEVT EADALLHVVDLSNPAWMNHIQAVQHILESLPIATGPQLLVFNKVDRVSSQVRAFAEQEYPLAIFISAKNGWGFLALREAL TRWMRSLSDLWPPMAESGTGGETDLN
Sequences:
>Translated_586_residues MAIDSTITAFREPAIDKIYGPHKGLKPAQLRQLSRLYSRPFPVNRFLSPEFAERLAALSAELETPLCVYANRRGQVVRVG VGTPKETQFSPDELPRQGAERLSGLRCVATRLDGDGPSRGDLTALALQRLDALVILDVAIQGYRRQGGGLSGFVQRVHIA NLVPDPLAKWVVSTPQPLGQVSNQDFDEFLGDLEDEFRREWTARVVESDRERVLLIDFFSTRTSQRAMEEELSELVQLVT SAGGEVLKVFYQRREQPDPSTLIGRGKLEEVALSVQELGANLVVCGRELTSSQARNLELALGVRVVDRTELILDIFARRA RSHEGKLQVELAQLQYLMPRLTGKGEALSRLGGGIGTRGPGETKLETDRRVIRRRIAKLQGEVDDLQAHRARMRARRQRK EVPVFALVGYTNAGKSTLLNALTGAGTLVADQLFATLDPTTRRLELPTGDAVLLTDTVGFVHDLPPQLIDAFRATLEEVT EADALLHVVDLSNPAWMNHIQAVQHILESLPIATGPQLLVFNKVDRVSSQVRAFAEQEYPLAIFISAKNGWGFLALREAL TRWMRSLSDLWPPMAESGTGGETDLN >Mature_585_residues AIDSTITAFREPAIDKIYGPHKGLKPAQLRQLSRLYSRPFPVNRFLSPEFAERLAALSAELETPLCVYANRRGQVVRVGV GTPKETQFSPDELPRQGAERLSGLRCVATRLDGDGPSRGDLTALALQRLDALVILDVAIQGYRRQGGGLSGFVQRVHIAN LVPDPLAKWVVSTPQPLGQVSNQDFDEFLGDLEDEFRREWTARVVESDRERVLLIDFFSTRTSQRAMEEELSELVQLVTS AGGEVLKVFYQRREQPDPSTLIGRGKLEEVALSVQELGANLVVCGRELTSSQARNLELALGVRVVDRTELILDIFARRAR SHEGKLQVELAQLQYLMPRLTGKGEALSRLGGGIGTRGPGETKLETDRRVIRRRIAKLQGEVDDLQAHRARMRARRQRKE VPVFALVGYTNAGKSTLLNALTGAGTLVADQLFATLDPTTRRLELPTGDAVLLTDTVGFVHDLPPQLIDAFRATLEEVTE ADALLHVVDLSNPAWMNHIQAVQHILESLPIATGPQLLVFNKVDRVSSQVRAFAEQEYPLAIFISAKNGWGFLALREALT RWMRSLSDLWPPMAESGTGGETDLN
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=230, Percent_Identity=37.3913043478261, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI310133116, Length=220, Percent_Identity=38.1818181818182, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI310124269, Length=206, Percent_Identity=39.3203883495146, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI310124267, Length=206, Percent_Identity=39.3203883495146, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI310124171, Length=206, Percent_Identity=39.3203883495146, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI310124169, Length=206, Percent_Identity=39.3203883495146, Blast_Score=123, Evalue=4e-28, Organism=Escherichia coli, GI1790615, Length=353, Percent_Identity=45.6090651558074, Blast_Score=282, Evalue=5e-77, Organism=Caenorhabditis elegans, GI17561038, Length=286, Percent_Identity=32.5174825174825, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24650079, Length=325, Percent_Identity=34.7692307692308, Blast_Score=139, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 64891; Mature: 64760
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDSTITAFREPAIDKIYGPHKGLKPAQLRQLSRLYSRPFPVNRFLSPEFAERLAALSA CCCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH ELETPLCVYANRRGQVVRVGVGTPKETQFSPDELPRQGAERLSGLRCVATRLDGDGPSRG HCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC DLTALALQRLDALVILDVAIQGYRRQGGGLSGFVQRVHIANLVPDPLAKWVVSTPQPLGQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH VSNQDFDEFLGDLEDEFRREWTARVVESDRERVLLIDFFSTRTSQRAMEEELSELVQLVT CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHH SAGGEVLKVFYQRREQPDPSTLIGRGKLEEVALSVQELGANLVVCGRELTSSQARNLELA HCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHCCCEEEECCHHHHHHHCCEEEE LGVRVVDRTELILDIFARRARSHEGKLQVELAQLQYLMPRLTGKGEALSRLGGGIGTRGP ECEEEHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC GETKLETDRRVIRRRIAKLQGEVDDLQAHRARMRARRQRKEVPVFALVGYTNAGKSTLLN CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH ALTGAGTLVADQLFATLDPTTRRLELPTGDAVLLTDTVGFVHDLPPQLIDAFRATLEEVT HHHCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHH EADALLHVVDLSNPAWMNHIQAVQHILESLPIATGPQLLVFNKVDRVSSQVRAFAEQEYP HHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCC LAIFISAKNGWGFLALREALTRWMRSLSDLWPPMAESGTGGETDLN EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AIDSTITAFREPAIDKIYGPHKGLKPAQLRQLSRLYSRPFPVNRFLSPEFAERLAALSA CCCHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH ELETPLCVYANRRGQVVRVGVGTPKETQFSPDELPRQGAERLSGLRCVATRLDGDGPSRG HCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC DLTALALQRLDALVILDVAIQGYRRQGGGLSGFVQRVHIANLVPDPLAKWVVSTPQPLGQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH VSNQDFDEFLGDLEDEFRREWTARVVESDRERVLLIDFFSTRTSQRAMEEELSELVQLVT CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHH SAGGEVLKVFYQRREQPDPSTLIGRGKLEEVALSVQELGANLVVCGRELTSSQARNLELA HCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHCCCEEEECCHHHHHHHCCEEEE LGVRVVDRTELILDIFARRARSHEGKLQVELAQLQYLMPRLTGKGEALSRLGGGIGTRGP ECEEEHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC GETKLETDRRVIRRRIAKLQGEVDDLQAHRARMRARRQRKEVPVFALVGYTNAGKSTLLN CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH ALTGAGTLVADQLFATLDPTTRRLELPTGDAVLLTDTVGFVHDLPPQLIDAFRATLEEVT HHHCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHH EADALLHVVDLSNPAWMNHIQAVQHILESLPIATGPQLLVFNKVDRVSSQVRAFAEQEYP HHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCC LAIFISAKNGWGFLALREALTRWMRSLSDLWPPMAESGTGGETDLN EEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]