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The map label for this gene is msrB [H]

Identifier: 37523588

GI number: 37523588

Start: 4221166

End: 4221615

Strand: Reverse

Name: msrB [H]

Synonym: gll4019

Alternate gene names: 37523588

Gene position: 4221615-4221166 (Counterclockwise)

Preceding gene: 37523591

Following gene: 37523583

Centisome position: 90.61

GC content: 54.22

Gene sequence:

>450_bases
ATGCCCACCAAAGTCTTTAAATCGGAAGCCGAATGGAAAAAAATTCTGACACCCGAACAGTTTTTGATCACGCGCAAAAA
AGGCACCGAGCGGGCCTTTACGGGTAAATATCACGATACTAAGCAGGCAGGCATCTACCAGTGCGTTTGCTGTGAAACAC
CCTTGTTTTCGTCCGCTCAAAAGTACGACTCGGGAACGGGTTGGCCCAGCTTCTGGGGTCCTGTCAACCCGAAAAACATC
GCCACCAAAGCCGATTTCAGTCTTTTTATGCGGCGCACCGAGGTGCTCTGCGCGGTGTGTGACGCCCACCAGGGCCATCT
CTTCAACGACGGTCCGCCCCCGACCGGCTTGCGCTACTGCATCAATTCCGCCGCGCTCAAGTTCGTCAAATTGCCATTGG
TGAGCCGTCTGGGCCGGGGTTTTATTGAATACCTCACAAGCCAGGCCTGA

Upstream 100 bases:

>100_bases
GTGCTGTGGAGTACCGCCAATCCAAAAAACCGCCTTCCCCGTACACCCAGCAGATTCGGCCAAGCCGCGACCCAAGCCAC
GTCCAACCAGGAGAAACACG

Downstream 100 bases:

>100_bases
TGGCTGCTTTTTGTACAAACACGGTGCAGAAAAGAATCCGGCAGTTGTTCAAGGGGTGACAAAGTAGCTTGAGAACCAGA
CTGGACGAGCATTCCAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MPTKVFKSEAEWKKILTPEQFLITRKKGTERAFTGKYHDTKQAGIYQCVCCETPLFSSAQKYDSGTGWPSFWGPVNPKNI
ATKADFSLFMRRTEVLCAVCDAHQGHLFNDGPPPTGLRYCINSAALKFVKLPLVSRLGRGFIEYLTSQA

Sequences:

>Translated_149_residues
MPTKVFKSEAEWKKILTPEQFLITRKKGTERAFTGKYHDTKQAGIYQCVCCETPLFSSAQKYDSGTGWPSFWGPVNPKNI
ATKADFSLFMRRTEVLCAVCDAHQGHLFNDGPPPTGLRYCINSAALKFVKLPLVSRLGRGFIEYLTSQA
>Mature_148_residues
PTKVFKSEAEWKKILTPEQFLITRKKGTERAFTGKYHDTKQAGIYQCVCCETPLFSSAQKYDSGTGWPSFWGPVNPKNIA
TKADFSLFMRRTEVLCAVCDAHQGHLFNDGPPPTGLRYCINSAALKFVKLPLVSRLGRGFIEYLTSQA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=126, Percent_Identity=55.5555555555556, Blast_Score=147, Evalue=4e-36,
Organism=Homo sapiens, GI301336162, Length=126, Percent_Identity=55.5555555555556, Blast_Score=147, Evalue=4e-36,
Organism=Homo sapiens, GI73089054, Length=126, Percent_Identity=55.5555555555556, Blast_Score=147, Evalue=4e-36,
Organism=Homo sapiens, GI37620216, Length=126, Percent_Identity=55.5555555555556, Blast_Score=146, Evalue=6e-36,
Organism=Homo sapiens, GI117606353, Length=128, Percent_Identity=54.6875, Blast_Score=144, Evalue=3e-35,
Organism=Escherichia coli, GI1788077, Length=122, Percent_Identity=51.6393442622951, Blast_Score=137, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17553450, Length=124, Percent_Identity=46.7741935483871, Blast_Score=114, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI115532676, Length=124, Percent_Identity=46.7741935483871, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6319816, Length=129, Percent_Identity=39.5348837209302, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24645799, Length=127, Percent_Identity=50.3937007874016, Blast_Score=133, Evalue=5e-32,
Organism=Drosophila melanogaster, GI221378664, Length=128, Percent_Identity=49.21875, Blast_Score=132, Evalue=6e-32,
Organism=Drosophila melanogaster, GI45553335, Length=127, Percent_Identity=50.3937007874016, Blast_Score=132, Evalue=7e-32,
Organism=Drosophila melanogaster, GI21356369, Length=127, Percent_Identity=50.3937007874016, Blast_Score=132, Evalue=7e-32,
Organism=Drosophila melanogaster, GI221378662, Length=135, Percent_Identity=47.4074074074074, Blast_Score=131, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24645801, Length=139, Percent_Identity=45.3237410071942, Blast_Score=126, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24645804, Length=139, Percent_Identity=45.3237410071942, Blast_Score=125, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 16729; Mature: 16598

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTKVFKSEAEWKKILTPEQFLITRKKGTERAFTGKYHDTKQAGIYQCVCCETPLFSSAQ
CCCCHHCCHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHH
KYDSGTGWPSFWGPVNPKNIATKADFSLFMRRTEVLCAVCDAHQGHLFNDGPPPTGLRYC
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
INSAALKFVKLPLVSRLGRGFIEYLTSQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTKVFKSEAEWKKILTPEQFLITRKKGTERAFTGKYHDTKQAGIYQCVCCETPLFSSAQ
CCCHHCCHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHH
KYDSGTGWPSFWGPVNPKNIATKADFSLFMRRTEVLCAVCDAHQGHLFNDGPPPTGLRYC
HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
INSAALKFVKLPLVSRLGRGFIEYLTSQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA