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The map label for this gene is 37523523

Identifier: 37523523

GI number: 37523523

Start: 4150739

End: 4152442

Strand: Direct

Name: 37523523

Synonym: glr3954

Alternate gene names: NA

Gene position: 4150739-4152442 (Clockwise)

Preceding gene: 37523521

Following gene: 37523528

Centisome position: 89.09

GC content: 62.62

Gene sequence:

>1704_bases
ATGGTTCGATGGAAGCTGTTTGCCATCGGTGCATTCGGTGCTGCGTCGATGGTGTTCTCCAGTGATGCCGCCTCTGCCCA
GACCGGCGATCTCGAGCAGATCGACCGCTACACCCGCGAGATTTTTGGCCCGGGTCTGGCCCAGGTCAATTCGGTTTCGG
AGTTGAGCGATGTCGATCCCAATTCCTGGGCATTCCAGGCGCTCAAGAGCGTCGTCGAGCGTTACGGCTGTCTGGAGGGC
TATCCCGACAGGACCTATCTGGGCAATCGGCCGCTGTCGCGCTACGAATTTGCCGCCGGCCTCAACGCCTGTCTTGAAAA
AGTCAACGAATTGCTCGCCGCATCGAGCGGCAACAAGGTGACCAAAGAAGACCTGACGAATCTGCAGCGGCTGCAGGAGG
AATTTCGCAACGAACTGGCGGCTTTGCGCGGCCGGGTCGATGCTCTGGAGGCCAAGACCCGCGACATCGAGAGCAAACTG
TTTTCAGCCAACGCCAAACTGGACGGTTCGGTGGTCATGGCGGTCACCGGCGGCGGTGGGGGCGGCAGCAACACGGTCCT
GACGCCGAGTGCCGCCACGGGGCCCTTCGGCGATTCGGCCTTTTCCCAGTTTCTCGGACCGCTAAGGGCGATCCCGGCCG
CCTCGGCCAACGTCAGCTTCGTCGCCCGCACCACCCTCAATCTGCGTGCCTCGATCACCGGCAAAGACGAACTGCTGATT
CGCCTGCGCGGCGTCACCGGCCAGGATCTCGGAGCCGTTTTCCCCAACCAGGCGAGCAACTTCGGTACGCTCTTCTACGC
CCTCGGTCCGGGCAATGTCGCCTACGACGCCTCCACACCCAACGGCCGCGTCGACGGTGCAGCGCCGGTCTCCATCGACA
AGGTCCGCTATCTCTACAACTTCTCAGAAGGGTTTCGCGCCTTTATCGGCCCGCGCGTCGACATTTACGAATTTATCGAC
ACCAACTCCTTCTCCAACGAAGAGACCGACTTTTCGAGCGGCTTCACCATCAACAACCCGATGGTGACCTTCTATTTCAC
CGGCCCGGGCGGCGGCTTCGATTGGGACATCACCGGCAACCTCGCCTGGCGCGCCATCTACTTCGCCACCACCGGCGGTT
CGGCGATCGCCGGCCCCTTCGGCAGCACGGGCCTGTTCGGCGGCACCAACGTGATTGCCACCGAATTCGAGTTCAACCCG
AGCAAGACTGCGTTTATCAAGCTGCAGTACGTGCGCCTCACCGAGCTGGGAACACTCTTTGCCACCGGCCTGGGGGAGTT
GGCCAACGGCTCCAACAGCGACATTCTGGGGGTGAGCGCCGAGTGGGCGATTGTGCCGCAGGTCGTGCTGTTCGGCCGCT
TCGGACAGCTCTGGTCCAATTTGAACGGCAGGCCCGCCGAGAGCACCTTCAACACCGTCACCGGCACCACCTACCAGGTG
GGTCTCGGTTTTCCGAACCTGCTGGCGGCGGGGAACGCGGCGGGGGCCATCTTTGGTCAGCCCATCCGCTTTACCGGCGG
CCAGTACAACGGCCTCGACTTTGCCACCGCCGGGATCGAGAACGTCATCGAGGTCTACTACCGCCTGCAGTTGAGCGACC
GCTTCAGCATCACCCCCGACCTCCAGTTCGTCATCCAGCCCGCCAACACCCGCGACAGCAACGGCCTCACCATCGGCACG
CTGCGCGCCACCTTCCAGTTCTAA

Upstream 100 bases:

>100_bases
GTGTAATTTTGATTTTACTTGTAGCCTGAATTCCTTCTTAATCTCCGTATAACCAGATGTAGGATAAACCCTTGAATCGG
TAGGTTGTGAGGAGTAATCC

Downstream 100 bases:

>100_bases
TCCGCCCCTGCGGCTCTAGCAGCCGAGTGTCCGGCGCGTCTGGCGCTTGGTGAGGCCGTTGGTCCCGGTGGCCCGGCCGC
ACTGGTAGGTTTTTTGCTGG

Product: porin; major outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MVRWKLFAIGAFGAASMVFSSDAASAQTGDLEQIDRYTREIFGPGLAQVNSVSELSDVDPNSWAFQALKSVVERYGCLEG
YPDRTYLGNRPLSRYEFAAGLNACLEKVNELLAASSGNKVTKEDLTNLQRLQEEFRNELAALRGRVDALEAKTRDIESKL
FSANAKLDGSVVMAVTGGGGGGSNTVLTPSAATGPFGDSAFSQFLGPLRAIPAASANVSFVARTTLNLRASITGKDELLI
RLRGVTGQDLGAVFPNQASNFGTLFYALGPGNVAYDASTPNGRVDGAAPVSIDKVRYLYNFSEGFRAFIGPRVDIYEFID
TNSFSNEETDFSSGFTINNPMVTFYFTGPGGGFDWDITGNLAWRAIYFATTGGSAIAGPFGSTGLFGGTNVIATEFEFNP
SKTAFIKLQYVRLTELGTLFATGLGELANGSNSDILGVSAEWAIVPQVVLFGRFGQLWSNLNGRPAESTFNTVTGTTYQV
GLGFPNLLAAGNAAGAIFGQPIRFTGGQYNGLDFATAGIENVIEVYYRLQLSDRFSITPDLQFVIQPANTRDSNGLTIGT
LRATFQF

Sequences:

>Translated_567_residues
MVRWKLFAIGAFGAASMVFSSDAASAQTGDLEQIDRYTREIFGPGLAQVNSVSELSDVDPNSWAFQALKSVVERYGCLEG
YPDRTYLGNRPLSRYEFAAGLNACLEKVNELLAASSGNKVTKEDLTNLQRLQEEFRNELAALRGRVDALEAKTRDIESKL
FSANAKLDGSVVMAVTGGGGGGSNTVLTPSAATGPFGDSAFSQFLGPLRAIPAASANVSFVARTTLNLRASITGKDELLI
RLRGVTGQDLGAVFPNQASNFGTLFYALGPGNVAYDASTPNGRVDGAAPVSIDKVRYLYNFSEGFRAFIGPRVDIYEFID
TNSFSNEETDFSSGFTINNPMVTFYFTGPGGGFDWDITGNLAWRAIYFATTGGSAIAGPFGSTGLFGGTNVIATEFEFNP
SKTAFIKLQYVRLTELGTLFATGLGELANGSNSDILGVSAEWAIVPQVVLFGRFGQLWSNLNGRPAESTFNTVTGTTYQV
GLGFPNLLAAGNAAGAIFGQPIRFTGGQYNGLDFATAGIENVIEVYYRLQLSDRFSITPDLQFVIQPANTRDSNGLTIGT
LRATFQF
>Mature_567_residues
MVRWKLFAIGAFGAASMVFSSDAASAQTGDLEQIDRYTREIFGPGLAQVNSVSELSDVDPNSWAFQALKSVVERYGCLEG
YPDRTYLGNRPLSRYEFAAGLNACLEKVNELLAASSGNKVTKEDLTNLQRLQEEFRNELAALRGRVDALEAKTRDIESKL
FSANAKLDGSVVMAVTGGGGGGSNTVLTPSAATGPFGDSAFSQFLGPLRAIPAASANVSFVARTTLNLRASITGKDELLI
RLRGVTGQDLGAVFPNQASNFGTLFYALGPGNVAYDASTPNGRVDGAAPVSIDKVRYLYNFSEGFRAFIGPRVDIYEFID
TNSFSNEETDFSSGFTINNPMVTFYFTGPGGGFDWDITGNLAWRAIYFATTGGSAIAGPFGSTGLFGGTNVIATEFEFNP
SKTAFIKLQYVRLTELGTLFATGLGELANGSNSDILGVSAEWAIVPQVVLFGRFGQLWSNLNGRPAESTFNTVTGTTYQV
GLGFPNLLAAGNAAGAIFGQPIRFTGGQYNGLDFATAGIENVIEVYYRLQLSDRFSITPDLQFVIQPANTRDSNGLTIGT
LRATFQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 60633; Mature: 60633

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRWKLFAIGAFGAASMVFSSDAASAQTGDLEQIDRYTREIFGPGLAQVNSVSELSDVDP
CCEEEEEEEECCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHCCCC
NSWAFQALKSVVERYGCLEGYPDRTYLGNRPLSRYEFAAGLNACLEKVNELLAASSGNKV
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TKEDLTNLQRLQEEFRNELAALRGRVDALEAKTRDIESKLFSANAKLDGSVVMAVTGGGG
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
GGSNTVLTPSAATGPFGDSAFSQFLGPLRAIPAASANVSFVARTTLNLRASITGKDELLI
CCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCEEEE
RLRGVTGQDLGAVFPNQASNFGTLFYALGPGNVAYDASTPNGRVDGAAPVSIDKVRYLYN
EEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHEEHH
FSEGFRAFIGPRVDIYEFIDTNSFSNEETDFSSGFTINNPMVTFYFTGPGGGFDWDITGN
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEEEECC
LAWRAIYFATTGGSAIAGPFGSTGLFGGTNVIATEFEFNPSKTAFIKLQYVRLTELGTLF
EEEEEEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEHHHHHHH
ATGLGELANGSNSDILGVSAEWAIVPQVVLFGRFGQLWSNLNGRPAESTFNTVTGTTYQV
HHCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
GLGFPNLLAAGNAAGAIFGQPIRFTGGQYNGLDFATAGIENVIEVYYRLQLSDRFSITPD
ECCCHHHHHCCCCCCHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCC
LQFVIQPANTRDSNGLTIGTLRATFQF
EEEEEECCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MVRWKLFAIGAFGAASMVFSSDAASAQTGDLEQIDRYTREIFGPGLAQVNSVSELSDVDP
CCEEEEEEEECCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHCCCC
NSWAFQALKSVVERYGCLEGYPDRTYLGNRPLSRYEFAAGLNACLEKVNELLAASSGNKV
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TKEDLTNLQRLQEEFRNELAALRGRVDALEAKTRDIESKLFSANAKLDGSVVMAVTGGGG
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
GGSNTVLTPSAATGPFGDSAFSQFLGPLRAIPAASANVSFVARTTLNLRASITGKDELLI
CCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCEEEE
RLRGVTGQDLGAVFPNQASNFGTLFYALGPGNVAYDASTPNGRVDGAAPVSIDKVRYLYN
EEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHEEHH
FSEGFRAFIGPRVDIYEFIDTNSFSNEETDFSSGFTINNPMVTFYFTGPGGGFDWDITGN
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEEEECC
LAWRAIYFATTGGSAIAGPFGSTGLFGGTNVIATEFEFNPSKTAFIKLQYVRLTELGTLF
EEEEEEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEHHHHHHH
ATGLGELANGSNSDILGVSAEWAIVPQVVLFGRFGQLWSNLNGRPAESTFNTVTGTTYQV
HHCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
GLGFPNLLAAGNAAGAIFGQPIRFTGGQYNGLDFATAGIENVIEVYYRLQLSDRFSITPD
ECCCHHHHHCCCCCCHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCC
LQFVIQPANTRDSNGLTIGTLRATFQF
EEEEEECCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]