| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523528
Identifier: 37523528
GI number: 37523528
Start: 4155493
End: 4156818
Strand: Direct
Name: 37523528
Synonym: glr3959
Alternate gene names: NA
Gene position: 4155493-4156818 (Clockwise)
Preceding gene: 37523523
Following gene: 37523531
Centisome position: 89.19
GC content: 66.89
Gene sequence:
>1326_bases ATGAGCGCCCCTGTGCAAATTCCCGCCCCGGCCCAATCGCGCGATTGGCCCTACCTCGTCGGTGTGGGCGGCTACGCGAT CCTCGACACCGTCCTGCAGACGTGGCTGATATTTTTGTTTACCGCCCAGACGGCCCCGGGCGGGCCGCTGGTCGCTCCGG CCGTCTTTGGGCTGGCGCTTTTGGCGGCGCGCATCTGCGAGGCGGTGGCCAACCCCCTGGCCGGATTCGGGGCCGACCGC AGCGGCAGGCCGTGGCTGTTTTTGCTGGTGGGGACTTTGGTCTTCGGCGGGGCGGGATTGGCGCTATTCTGGGCGCCGGG TCCGGGCCTCGGGCCGCTCAACGCCGCGCTGCTCTTTGCGCTGTTGCCCCTCGCCCTGGTGGCACAGTCGAGCTACATCG TGCCGTACCTCGGACTGTTGCCGCAGTTGGCCCGCGACGACGAGCGCCGCGTGCGCGTGAGTAACGGCCAGGCGCTGGTG CTGCTGGCCGGTGTGTTCGTGGGTCAGGTGCTCTCCGGCCCGGCGCTGGGGTGGTTGGACAACCGGCTTGCGCTGATGGC GACGCTGTTTATCGCCCTGGCCATGGCCCTGATGCTGGTGCCGCTGCTGTCGGTCCGCTCGCTGCAGATGGAGCGCTCCC GTTTGGTGCTCGCCCAGATGGGGCAGGTGCTGGTGCGCAACCCCGGCTTTCGGATCTTGGTGGTGGCCCAGGCGCTCTTC TGGCTCGGGTTCAACACGGTGCGCCTGGCAGCCATCTTTTTTGTAACGGTGCTGCTGGGACAGGAAGCGGCCCGGCTGTC GCTGTTTTTGGGGGCGATTTTTCTGGTGACGGTGCCGTCGCTTTTGGCGTTGCGCTTTGTGGTGCCGCGGCTGGGTAAGC GCAGGAGCATGATCCTCGCCACCGGCAGCTTCGCGGTGCTCCTGCCGCTGCTTGCCACGGTCGGCCGCTCGGTCGGGCCT TTGAGCGCCGAGCAGTGGGCCTTGTCGCTCTTCGCCTCGCTCGGTTTTCCGCTGGCCATCCTCTCGGTGGTGCAAAACCC GATGGTGGCCGAGCAGGTCGAGCAGGACGCAAAATCCAGCGGGGAAGCCAAAGGAGCCTTGTTTTTCGGCCTGCAGGGAT TGGCCATCAAGCTCAGCTACGGCCTGGCGGCGGCGCTGCTCGGTTTTTTGCAGTCGCAGTTCGGCTACAGCCCGGGCCAA CCGCTGGGCATCCAGCTGGTGGGACCGATCGCCGGGGTGCTCGCCCTGGGGGCCGCCATCGCCTACGGGTTCTATCCGAA GGACTTTGAGCAATCGGCTACTCAGCCGGCGGAGACCAGAAAGTAG
Upstream 100 bases:
>100_bases CCAGGCGGATCGCCCGCGGGTCTAAAGAAACGAGTTACTATCCTCCGAGTGTCGCCCAAGCGACTGCAATCGGTGGGGTA GCCAGCGCATTCTGATCGAC
Downstream 100 bases:
>100_bases CGGTAGCGTGCCCGCCAGCGCCGCAGTTGCTTGAGCATGCAGCGCGCCGGGGTGTCGAAGACTGTGAAGATGTCGCCGTA GCCGATGGTGCTGTTGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Na+/Melibiose Symporter And Related Transporters
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSAPVQIPAPAQSRDWPYLVGVGGYAILDTVLQTWLIFLFTAQTAPGGPLVAPAVFGLALLAARICEAVANPLAGFGADR SGRPWLFLLVGTLVFGGAGLALFWAPGPGLGPLNAALLFALLPLALVAQSSYIVPYLGLLPQLARDDERRVRVSNGQALV LLAGVFVGQVLSGPALGWLDNRLALMATLFIALAMALMLVPLLSVRSLQMERSRLVLAQMGQVLVRNPGFRILVVAQALF WLGFNTVRLAAIFFVTVLLGQEAARLSLFLGAIFLVTVPSLLALRFVVPRLGKRRSMILATGSFAVLLPLLATVGRSVGP LSAEQWALSLFASLGFPLAILSVVQNPMVAEQVEQDAKSSGEAKGALFFGLQGLAIKLSYGLAAALLGFLQSQFGYSPGQ PLGIQLVGPIAGVLALGAAIAYGFYPKDFEQSATQPAETRK
Sequences:
>Translated_441_residues MSAPVQIPAPAQSRDWPYLVGVGGYAILDTVLQTWLIFLFTAQTAPGGPLVAPAVFGLALLAARICEAVANPLAGFGADR SGRPWLFLLVGTLVFGGAGLALFWAPGPGLGPLNAALLFALLPLALVAQSSYIVPYLGLLPQLARDDERRVRVSNGQALV LLAGVFVGQVLSGPALGWLDNRLALMATLFIALAMALMLVPLLSVRSLQMERSRLVLAQMGQVLVRNPGFRILVVAQALF WLGFNTVRLAAIFFVTVLLGQEAARLSLFLGAIFLVTVPSLLALRFVVPRLGKRRSMILATGSFAVLLPLLATVGRSVGP LSAEQWALSLFASLGFPLAILSVVQNPMVAEQVEQDAKSSGEAKGALFFGLQGLAIKLSYGLAAALLGFLQSQFGYSPGQ PLGIQLVGPIAGVLALGAAIAYGFYPKDFEQSATQPAETRK >Mature_440_residues SAPVQIPAPAQSRDWPYLVGVGGYAILDTVLQTWLIFLFTAQTAPGGPLVAPAVFGLALLAARICEAVANPLAGFGADRS GRPWLFLLVGTLVFGGAGLALFWAPGPGLGPLNAALLFALLPLALVAQSSYIVPYLGLLPQLARDDERRVRVSNGQALVL LAGVFVGQVLSGPALGWLDNRLALMATLFIALAMALMLVPLLSVRSLQMERSRLVLAQMGQVLVRNPGFRILVVAQALFW LGFNTVRLAAIFFVTVLLGQEAARLSLFLGAIFLVTVPSLLALRFVVPRLGKRRSMILATGSFAVLLPLLATVGRSVGPL SAEQWALSLFASLGFPLAILSVVQNPMVAEQVEQDAKSSGEAKGALFFGLQGLAIKLSYGLAAALLGFLQSQFGYSPGQP LGIQLVGPIAGVLALGAAIAYGFYPKDFEQSATQPAETRK
Specific function: Unknown
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46453; Mature: 46322
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPVQIPAPAQSRDWPYLVGVGGYAILDTVLQTWLIFLFTAQTAPGGPLVAPAVFGLAL CCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAARICEAVANPLAGFGADRSGRPWLFLLVGTLVFGGAGLALFWAPGPGLGPLNAALLFA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH LLPLALVAQSSYIVPYLGLLPQLARDDERRVRVSNGQALVLLAGVFVGQVLSGPALGWLD HHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHCCCCCHHHH NRLALMATLFIALAMALMLVPLLSVRSLQMERSRLVLAQMGQVLVRNPGFRILVVAQALF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH WLGFNTVRLAAIFFVTVLLGQEAARLSLFLGAIFLVTVPSLLALRFVVPRLGKRRSMILA HHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE TGSFAVLLPLLATVGRSVGPLSAEQWALSLFASLGFPLAILSVVQNPMVAEQVEQDAKSS CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHC GEAKGALFFGLQGLAIKLSYGLAAALLGFLQSQFGYSPGQPLGIQLVGPIAGVLALGAAI CCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH AYGFYPKDFEQSATQPAETRK HHCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure SAPVQIPAPAQSRDWPYLVGVGGYAILDTVLQTWLIFLFTAQTAPGGPLVAPAVFGLAL CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAARICEAVANPLAGFGADRSGRPWLFLLVGTLVFGGAGLALFWAPGPGLGPLNAALLFA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH LLPLALVAQSSYIVPYLGLLPQLARDDERRVRVSNGQALVLLAGVFVGQVLSGPALGWLD HHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHCCCCCHHHH NRLALMATLFIALAMALMLVPLLSVRSLQMERSRLVLAQMGQVLVRNPGFRILVVAQALF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH WLGFNTVRLAAIFFVTVLLGQEAARLSLFLGAIFLVTVPSLLALRFVVPRLGKRRSMILA HHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE TGSFAVLLPLLATVGRSVGPLSAEQWALSLFASLGFPLAILSVVQNPMVAEQVEQDAKSS CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHC GEAKGALFFGLQGLAIKLSYGLAAALLGFLQSQFGYSPGQPLGIQLVGPIAGVLALGAAI CCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH AYGFYPKDFEQSATQPAETRK HHCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA