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The map label for this gene is yggU [C]

Identifier: 37523404

GI number: 37523404

Start: 4039160

End: 4039495

Strand: Direct

Name: yggU [C]

Synonym: glr3835

Alternate gene names: 37523404

Gene position: 4039160-4039495 (Clockwise)

Preceding gene: 37523403

Following gene: 161702940

Centisome position: 86.7

GC content: 60.71

Gene sequence:

>336_bases
GTGCGCTCTCCGCTTCCGCCGATGCCCGACCCTGAGGCATTCCCGCCCGGAGCCGTGAGTGTCGATGCAGGCGGGATCAC
CCTCACTGTCTGGGCTCAGCCGCGCGCCAGCTGTTCTGAGGTGGTGGGCTGGCAGCAGAACGCCTTCAAAGTGCGTCTTG
CCGCCCCGCCGGTCGAAGGTAAGGCCAATGCCGAGTGCGTCGCTTTGATCGCCGCGTTTTTCGGTGTACCCCGCCGACAG
GTAAGCCTTGTTCAGGGCCAGCAAGGACGTCATAAAAAAATCCGCATCGAAGCTCCTGCTGACTTATTACTTGTCGCTTT
GCAAAAACTCTCGTAG

Upstream 100 bases:

>100_bases
CGCACGGCAGTCTGGACGATCCACTCGCTAATTTTGTGTCTATTTTTCGGCCCGTTCGGGCTGCTCTCCCACATCCTCAC
CGCCTGGGTCAGCCAAAAAG

Downstream 100 bases:

>100_bases
GCAGTAAGTCGCGAAAGGGATAGCAAAAGCAGTCAACTTAATTCCCAACTGGAAGCTCATCCTACCTGAGATGCTAAGCT
GCCCTAGAGCATCGGTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MRSPLPPMPDPEAFPPGAVSVDAGGITLTVWAQPRASCSEVVGWQQNAFKVRLAAPPVEGKANAECVALIAAFFGVPRRQ
VSLVQGQQGRHKKIRIEAPADLLLVALQKLS

Sequences:

>Translated_111_residues
MRSPLPPMPDPEAFPPGAVSVDAGGITLTVWAQPRASCSEVVGWQQNAFKVRLAAPPVEGKANAECVALIAAFFGVPRRQ
VSLVQGQQGRHKKIRIEAPADLLLVALQKLS
>Mature_111_residues
MRSPLPPMPDPEAFPPGAVSVDAGGITLTVWAQPRASCSEVVGWQQNAFKVRLAAPPVEGKANAECVALIAAFFGVPRRQ
VSLVQGQQGRHKKIRIEAPADLLLVALQKLS

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

Organism=Escherichia coli, GI87082189, Length=83, Percent_Identity=39.7590361445783, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3835_GLOVI (Q7NEP3)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_926781.1
- ProteinModelPortal:   Q7NEP3
- SMR:   Q7NEP3
- GeneID:   2602238
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:glr3835
- NMPDR:   fig|251221.1.peg.3835
- HOGENOM:   HBG472132
- OMA:   CVELIAK
- BioCyc:   GVIO251221:GLR3835-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 11821; Mature: 11821

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPLPPMPDPEAFPPGAVSVDAGGITLTVWAQPRASCSEVVGWQQNAFKVRLAAPPVEG
CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCC
KANAECVALIAAFFGVPRRQVSLVQGQQGRHKKIRIEAPADLLLVALQKLS
CCCHHHHHHHHHHHCCCCCEEHEECCCCCCCEEEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MRSPLPPMPDPEAFPPGAVSVDAGGITLTVWAQPRASCSEVVGWQQNAFKVRLAAPPVEG
CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCC
KANAECVALIAAFFGVPRRQVSLVQGQQGRHKKIRIEAPADLLLVALQKLS
CCCHHHHHHHHHHHCCCCCEEHEECCCCCCCEEEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292