| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523145
Identifier: 37523145
GI number: 37523145
Start: 3766134
End: 3767714
Strand: Reverse
Name: 37523145
Synonym: gll3576
Alternate gene names: NA
Gene position: 3767714-3766134 (Counterclockwise)
Preceding gene: 37523146
Following gene: 37523144
Centisome position: 80.87
GC content: 66.67
Gene sequence:
>1581_bases ATGAGAGCGGCGTACCCACCGTCTACACCAATGCCCCGAGGTTTTGGCAAACCCCCCCGCCGTGACAATCGACCGTCCAC GGCCATGGCCCAGGCTGCGGAGCTGCTCGATCTGGGGTTGGTTCTGCACCGGCAGGGACGCCTGGCCGAAGCGATTGTCC GCTACGGCCAGGCGCTCGACTTTCAGGCCGATTATGTCGAGGCCCACTTTGCCCTGGGGCTTGCCCTGCAGGCGCGCGGC GAGGGCGAAGAAGCCATTCACCATTTTCAGCGCGCCATCGAGCTGCGTAGTTACTATACCGACGCCCACTTTGCCCTGGG GACCGCCCTGCAGGAGCAGCGGGACTTCGAAGGGGCGCTCGGTTGCTACCAGCGCACCCTCGCCATCGAACCCGAGTACG TCAAAGCCCACAACAATCTCGGGGCGGTCCAGCGCGAACTGGGGAATCTAGATGATGCGATCGCCTCCTACCGGCGGGCG TTGGCCCTCGAACCGGATTACCTCGAAGCCCACAACAATCTCGGGGTGGTCCTGCGCGAGCGCGGCCAATTAGAAGAAGC CGCCCTTTGTTTTAAGCGGGCTTTTCAGCTGCAACCCGATTTTGCCGAGGCTTACTACAACCTCGGTCTGCTCCTGCACT CCCAGCAAAAACTCGCCGAGGCAATCTCTGTCTACCGCACCGCCCTAATTATCAAAGGCGACCTGGTGGAGGCGCGCGTC AACCTGGCCCACGCCCTGCAGGCAAGCGGCCAGGGCGACGCGGCCATCGAGGAGCACCGCCGGGCGGTTGAACTGGCACC GGCTCTGGCTGAAGCCCACTGCGGACTGGGTAACGCCCTGCGCGACGCGGGCCGACTGGCCGAAGCCGCCGAGTGCTACG CCGAAGCACTGCGCCTCAAACCCGATTACGCCGAGGCCCGCCACTACCTGGCGGCGGTGGGCGGCGCTCCCACTCCGGCC ATGACCGACCCGGATTACGTGGCGGCTCTTTTTGATGAATACGCCGAGCGCTTCGACCGGCACCTGACCGGGGAACTGGC CTACCGGGCGCCCGAACTGCTCGTGGGGGCCGTCCAAGCCGCCACTCCCCACACCGAGGGACTCTTGAACGTCCTCGATC TCGGCTGCGGCACCGGGCTTTGCGGCCCGCTTTTGCGGCCTTTGGCCCAGCGGTTGGTGGGGATGGATCTCTCGGCCAAG ATGATCGGCAAAGCGCGCGCGCGCGGCGTCTACGACGATCTGGCGGTGGGCGAGATGACCGAGTGGCTGGGGCGGCACCA CGACGCCTTTGACCTGATCGTCGCGGCGGATGTGTTCACCTACGTGGGCGACCTGGCCGCCGTGTTCGCCGCCGCGGCCC TCACCCTGGTGCCGGGGGGCGTGCTCGCTTGCTCGGTCGAAGCGGGCGAAGCGGGCTACACCCTGCTCCCCAACGGCCGC TACGCCCATGCCCTCGATTATGTGCACAAGGAGGCCGCCGCCGCCGCTCTGGTGGCGGTGAGCACCGAGCGGGCCATTTT GCGCACCGAGCGAGGCCGGGCGGTCGAAGGCTGGATCGTCGTGCTGCGCAGCCTGCGTTGA
Upstream 100 bases:
>100_bases GAGAACGAAAGGCCCGTCTTCCGCCGCCTAAGCGCCATGCCGGTTGTCTAGGTGTCAGGTGGAACTTACCTGACACCTGA CACCTGACACCTTGTGTACC
Downstream 100 bases:
>100_bases GACGACCCTTGACAGTACCCGCAGTCGATCACTAAGCTAGGATCTGCACAATTTGCGGCCAGCTATGAAAGTCCGTGCGT CCGTCAAACCGATATGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MRAAYPPSTPMPRGFGKPPRRDNRPSTAMAQAAELLDLGLVLHRQGRLAEAIVRYGQALDFQADYVEAHFALGLALQARG EGEEAIHHFQRAIELRSYYTDAHFALGTALQEQRDFEGALGCYQRTLAIEPEYVKAHNNLGAVQRELGNLDDAIASYRRA LALEPDYLEAHNNLGVVLRERGQLEEAALCFKRAFQLQPDFAEAYYNLGLLLHSQQKLAEAISVYRTALIIKGDLVEARV NLAHALQASGQGDAAIEEHRRAVELAPALAEAHCGLGNALRDAGRLAEAAECYAEALRLKPDYAEARHYLAAVGGAPTPA MTDPDYVAALFDEYAERFDRHLTGELAYRAPELLVGAVQAATPHTEGLLNVLDLGCGTGLCGPLLRPLAQRLVGMDLSAK MIGKARARGVYDDLAVGEMTEWLGRHHDAFDLIVAADVFTYVGDLAAVFAAAALTLVPGGVLACSVEAGEAGYTLLPNGR YAHALDYVHKEAAAAALVAVSTERAILRTERGRAVEGWIVVLRSLR
Sequences:
>Translated_526_residues MRAAYPPSTPMPRGFGKPPRRDNRPSTAMAQAAELLDLGLVLHRQGRLAEAIVRYGQALDFQADYVEAHFALGLALQARG EGEEAIHHFQRAIELRSYYTDAHFALGTALQEQRDFEGALGCYQRTLAIEPEYVKAHNNLGAVQRELGNLDDAIASYRRA LALEPDYLEAHNNLGVVLRERGQLEEAALCFKRAFQLQPDFAEAYYNLGLLLHSQQKLAEAISVYRTALIIKGDLVEARV NLAHALQASGQGDAAIEEHRRAVELAPALAEAHCGLGNALRDAGRLAEAAECYAEALRLKPDYAEARHYLAAVGGAPTPA MTDPDYVAALFDEYAERFDRHLTGELAYRAPELLVGAVQAATPHTEGLLNVLDLGCGTGLCGPLLRPLAQRLVGMDLSAK MIGKARARGVYDDLAVGEMTEWLGRHHDAFDLIVAADVFTYVGDLAAVFAAAALTLVPGGVLACSVEAGEAGYTLLPNGR YAHALDYVHKEAAAAALVAVSTERAILRTERGRAVEGWIVVLRSLR >Mature_526_residues MRAAYPPSTPMPRGFGKPPRRDNRPSTAMAQAAELLDLGLVLHRQGRLAEAIVRYGQALDFQADYVEAHFALGLALQARG EGEEAIHHFQRAIELRSYYTDAHFALGTALQEQRDFEGALGCYQRTLAIEPEYVKAHNNLGAVQRELGNLDDAIASYRRA LALEPDYLEAHNNLGVVLRERGQLEEAALCFKRAFQLQPDFAEAYYNLGLLLHSQQKLAEAISVYRTALIIKGDLVEARV NLAHALQASGQGDAAIEEHRRAVELAPALAEAHCGLGNALRDAGRLAEAAECYAEALRLKPDYAEARHYLAAVGGAPTPA MTDPDYVAALFDEYAERFDRHLTGELAYRAPELLVGAVQAATPHTEGLLNVLDLGCGTGLCGPLLRPLAQRLVGMDLSAK MIGKARARGVYDDLAVGEMTEWLGRHHDAFDLIVAADVFTYVGDLAAVFAAAALTLVPGGVLACSVEAGEAGYTLLPNGR YAHALDYVHKEAAAAALVAVSTERAILRTERGRAVEGWIVVLRSLR
Specific function: Unknown
COG id: COG4976
COG function: function code R; Predicted methyltransferase (contains TPR repeat)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=277, Percent_Identity=35.7400722021661, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI32307148, Length=277, Percent_Identity=35.7400722021661, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI301336134, Length=296, Percent_Identity=28.7162162162162, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI83415184, Length=296, Percent_Identity=28.7162162162162, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI118766330, Length=193, Percent_Identity=34.1968911917098, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI118766328, Length=193, Percent_Identity=34.1968911917098, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI22749211, Length=282, Percent_Identity=28.7234042553192, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI224809432, Length=303, Percent_Identity=23.7623762376238, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI167466177, Length=277, Percent_Identity=21.2996389891697, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI167466175, Length=277, Percent_Identity=21.2996389891697, Blast_Score=66, Evalue=8e-11, Organism=Caenorhabditis elegans, GI115532690, Length=309, Percent_Identity=34.3042071197411, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI115532692, Length=309, Percent_Identity=34.3042071197411, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI25147174, Length=248, Percent_Identity=25.4032258064516, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI25146105, Length=205, Percent_Identity=26.3414634146341, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17560436, Length=209, Percent_Identity=24.8803827751196, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6319387, Length=203, Percent_Identity=26.1083743842365, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI17647755, Length=277, Percent_Identity=35.3790613718412, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI24585827, Length=277, Percent_Identity=35.3790613718412, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI24585829, Length=277, Percent_Identity=35.3790613718412, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI161076610, Length=341, Percent_Identity=29.0322580645161, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI19920486, Length=341, Percent_Identity=29.0322580645161, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI281364285, Length=340, Percent_Identity=28.2352941176471, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581187, Length=340, Percent_Identity=28.2352941176471, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI24647123, Length=192, Percent_Identity=27.6041666666667, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24656717, Length=333, Percent_Identity=24.024024024024, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI18110006, Length=333, Percent_Identity=24.024024024024, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 56988; Mature: 56988
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAYPPSTPMPRGFGKPPRRDNRPSTAMAQAAELLDLGLVLHRQGRLAEAIVRYGQALD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC FQADYVEAHFALGLALQARGEGEEAIHHFQRAIELRSYYTDAHFALGTALQEQRDFEGAL CCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCYQRTLAIEPEYVKAHNNLGAVQRELGNLDDAIASYRRALALEPDYLEAHNNLGVVLRE HHHHHHHCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEECC RGQLEEAALCFKRAFQLQPDFAEAYYNLGLLLHSQQKLAEAISVYRTALIIKGDLVEARV CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECHHHHHHHHHHHHHHHHEECHHHHHHH NLAHALQASGQGDAAIEEHRRAVELAPALAEAHCGLGNALRDAGRLAEAAECYAEALRLK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC PDYAEARHYLAAVGGAPTPAMTDPDYVAALFDEYAERFDRHLTGELAYRAPELLVGAVQA CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHH ATPHTEGLLNVLDLGCGTGLCGPLLRPLAQRLVGMDLSAKMIGKARARGVYDDLAVGEMT CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH EWLGRHHDAFDLIVAADVFTYVGDLAAVFAAAALTLVPGGVLACSVEAGEAGYTLLPNGR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCC YAHALDYVHKEAAAAALVAVSTERAILRTERGRAVEGWIVVLRSLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MRAAYPPSTPMPRGFGKPPRRDNRPSTAMAQAAELLDLGLVLHRQGRLAEAIVRYGQALD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC FQADYVEAHFALGLALQARGEGEEAIHHFQRAIELRSYYTDAHFALGTALQEQRDFEGAL CCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCYQRTLAIEPEYVKAHNNLGAVQRELGNLDDAIASYRRALALEPDYLEAHNNLGVVLRE HHHHHHHCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEECC RGQLEEAALCFKRAFQLQPDFAEAYYNLGLLLHSQQKLAEAISVYRTALIIKGDLVEARV CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECHHHHHHHHHHHHHHHHEECHHHHHHH NLAHALQASGQGDAAIEEHRRAVELAPALAEAHCGLGNALRDAGRLAEAAECYAEALRLK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC PDYAEARHYLAAVGGAPTPAMTDPDYVAALFDEYAERFDRHLTGELAYRAPELLVGAVQA CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHH ATPHTEGLLNVLDLGCGTGLCGPLLRPLAQRLVGMDLSAKMIGKARARGVYDDLAVGEMT CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH EWLGRHHDAFDLIVAADVFTYVGDLAAVFAAAALTLVPGGVLACSVEAGEAGYTLLPNGR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCC YAHALDYVHKEAAAAALVAVSTERAILRTERGRAVEGWIVVLRSLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]