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The map label for this gene is ybaB [C]

Identifier: 37523067

GI number: 37523067

Start: 3707293

End: 3707628

Strand: Direct

Name: ybaB [C]

Synonym: glr3498

Alternate gene names: 37523067

Gene position: 3707293-3707628 (Clockwise)

Preceding gene: 37523066

Following gene: 37523068

Centisome position: 79.57

GC content: 61.01

Gene sequence:

>336_bases
ATGAGCAAAGGCTTCGGTCCGATGGGCCAGTTCCAGGAAGCGCTCAAGCGCGTCAAGCAAATCCAAGAAGGCAGCGCCAA
GCTCCAGGACGAGTTGGCCGCGCTTTCGATCGAGGGCGTCGCCGGCGGCGGTCTGGTCAAGGTGACCCTGAGCGGCAACC
AGGAACCGACTGGCGTCACCATCGACCCGCAGCTTCTCTCAGAAAGCAAAGAAGTGGTCGAAGACCTGCTGCTGACCGCC
TATAAAGACGCCTACACCAAGTCCGCCGAGACGATGAAGGCGAAGATGCAGGAATTGACCGGCGGCATGGAGCTGCCCCC
GGGTCTTGGCTTCTAG

Upstream 100 bases:

>100_bases
CGACTTTCGCGCCCGCCCTCCCGGCTCCCCTTGACCGGTTGCGCTCTGGACAAGTGTCCGGATTGTCTACAATAAGTAAG
CCTCCAGGAGAACGATCTAC

Downstream 100 bases:

>100_bases
CCAGTCGCTCTTTTTTTGGCCGGTGCCGCCCAAAAGCGGCACCCGATACTTGATACCCGGCACCGCCCATGTACACCCGG
CCCCTGGCCCGACTCATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSKGFGPMGQFQEALKRVKQIQEGSAKLQDELAALSIEGVAGGGLVKVTLSGNQEPTGVTIDPQLLSESKEVVEDLLLTA
YKDAYTKSAETMKAKMQELTGGMELPPGLGF

Sequences:

>Translated_111_residues
MSKGFGPMGQFQEALKRVKQIQEGSAKLQDELAALSIEGVAGGGLVKVTLSGNQEPTGVTIDPQLLSESKEVVEDLLLTA
YKDAYTKSAETMKAKMQELTGGMELPPGLGF
>Mature_110_residues
SKGFGPMGQFQEALKRVKQIQEGSAKLQDELAALSIEGVAGGGLVKVTLSGNQEPTGVTIDPQLLSESKEVVEDLLLTAY
KDAYTKSAETMKAKMQELTGGMELPPGLGF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=95, Percent_Identity=45.2631578947368, Blast_Score=90, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3498_GLOVI (Q7NFM6)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_926444.1
- ProteinModelPortal:   Q7NFM6
- SMR:   Q7NFM6
- GeneID:   2601902
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:glr3498
- NMPDR:   fig|251221.1.peg.3498
- HOGENOM:   HBG734215
- OMA:   GLPNFGQ
- ProtClustDB:   PRK00153
- BioCyc:   GVIO251221:GLR3498-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11759; Mature: 11627

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGFGPMGQFQEALKRVKQIQEGSAKLQDELAALSIEGVAGGGLVKVTLSGNQEPTGVT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCE
IDPQLLSESKEVVEDLLLTAYKDAYTKSAETMKAKMQELTGGMELPPGLGF
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SKGFGPMGQFQEALKRVKQIQEGSAKLQDELAALSIEGVAGGGLVKVTLSGNQEPTGVT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCE
IDPQLLSESKEVVEDLLLTAYKDAYTKSAETMKAKMQELTGGMELPPGLGF
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292