Click here to switch to the map view.

The map label for this gene is recR

Identifier: 37523068

GI number: 37523068

Start: 3707697

End: 3708290

Strand: Direct

Name: recR

Synonym: gvip475

Alternate gene names: 37523068

Gene position: 3707697-3708290 (Clockwise)

Preceding gene: 37523067

Following gene: 37523071

Centisome position: 79.58

GC content: 63.64

Gene sequence:

>594_bases
ATGTACACCCGGCCCCTGGCCCGACTCATCGAACACTTGCAGCGTCTGCCGGGCATCGGCCCCAAGACGGCCCAGCGCCT
GGCGTTTCATCTGTTGCGCCGCCCCAAGTCCGAGGCATTGCAACTGGCCCAGGCCCTTGTCGAAGCGACGGAGCAAATCG
GTGTGTGCAGCCGCTGTTTTAATCTTTCTGCCGAAGACCCTTGCGACATCTGCCGCCAGCCCGGCCGCCAGGGCGAGACG
ATTTGCGTGGTGGCCGAGCCGCGCGACTTGGTCGCCATCGAGCGCACCCGCGAGTTCAAGGGTCACTACCACGTCCTCGG
CGGGCTCATCAACCCCATGGAAGGCATCGGTCCCGAGCAGTTGCGCATCAAAGAACTGCTCCAGCGCGTCGGTGCCGATA
CGGTCAAAGAGGTGATCCTCGCCATCAACCCGAGCACTGAAGGGGAGATGACGACCATGTATCTGAGCAAATACGTCAAA
GTGCTCGGACCGCGCGTGACGCGCATCGCCTTCGGCCTGCCGGTGGGGGGCGATCTCGAATATGCCGACGAGATGACCCT
GGCGCGCGCCCTCGAAGGCCGCCGCGAAATTTAG

Upstream 100 bases:

>100_bases
GCATGGAGCTGCCCCCGGGTCTTGGCTTCTAGCCAGTCGCTCTTTTTTTGGCCGGTGCCGCCCAAAAGCGGCACCCGATA
CTTGATACCCGGCACCGCCC

Downstream 100 bases:

>100_bases
CCTTTGTCCTTGACTTGGTCGGCCTGCTGTTGCTCTTTGAGTTCTTCGAGTGCTTCGATAAGTTGCAGGATGCTGACGGC
GATATCGGGACGAACTTGCG

Product: recombination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MYTRPLARLIEHLQRLPGIGPKTAQRLAFHLLRRPKSEALQLAQALVEATEQIGVCSRCFNLSAEDPCDICRQPGRQGET
ICVVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQLRIKELLQRVGADTVKEVILAINPSTEGEMTTMYLSKYVK
VLGPRVTRIAFGLPVGGDLEYADEMTLARALEGRREI

Sequences:

>Translated_197_residues
MYTRPLARLIEHLQRLPGIGPKTAQRLAFHLLRRPKSEALQLAQALVEATEQIGVCSRCFNLSAEDPCDICRQPGRQGET
ICVVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQLRIKELLQRVGADTVKEVILAINPSTEGEMTTMYLSKYVK
VLGPRVTRIAFGLPVGGDLEYADEMTLARALEGRREI
>Mature_197_residues
MYTRPLARLIEHLQRLPGIGPKTAQRLAFHLLRRPKSEALQLAQALVEATEQIGVCSRCFNLSAEDPCDICRQPGRQGET
ICVVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQLRIKELLQRVGADTVKEVILAINPSTEGEMTTMYLSKYVK
VLGPRVTRIAFGLPVGGDLEYADEMTLARALEGRREI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=45.7286432160804, Blast_Score=177, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_GLOVI (Q7NFM5)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_926445.1
- ProteinModelPortal:   Q7NFM5
- SMR:   Q7NFM5
- GeneID:   2601903
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.3499
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- BioCyc:   GVIO251221:GLR3499-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21943; Mature: 21943

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTRPLARLIEHLQRLPGIGPKTAQRLAFHLLRRPKSEALQLAQALVEATEQIGVCSRCF
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NLSAEDPCDICRQPGRQGETICVVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQ
CCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCHHHCCCHHH
LRIKELLQRVGADTVKEVILAINPSTEGEMTTMYLSKYVKVLGPRVTRIAFGLPVGGDLE
HHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
YADEMTLARALEGRREI
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYTRPLARLIEHLQRLPGIGPKTAQRLAFHLLRRPKSEALQLAQALVEATEQIGVCSRCF
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NLSAEDPCDICRQPGRQGETICVVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQ
CCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCHHHCCCHHH
LRIKELLQRVGADTVKEVILAINPSTEGEMTTMYLSKYVKVLGPRVTRIAFGLPVGGDLE
HHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
YADEMTLARALEGRREI
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292