| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is tkt [H]
Identifier: 37523033
GI number: 37523033
Start: 3672527
End: 3674449
Strand: Reverse
Name: tkt [H]
Synonym: gll3464
Alternate gene names: 37523033
Gene position: 3674449-3672527 (Counterclockwise)
Preceding gene: 37523034
Following gene: 37523031
Centisome position: 78.87
GC content: 62.92
Gene sequence:
>1923_bases ATGTGGATCATGACAACAACCACCGTTCGCTTTCCGATCGATATCAGTGCCTACAAGCCGCTGGCGCTGGATTTTGCCAA TCCGGTGCTGAGCGCCGAACAGCGCGAGACGCTCAGAGCGAATATCCAGTTTTGTCGCGATGCGATTGTGTTCTTCACCG CCACCGGGGCGGCCCGGGGAGTGGGCGGCCACACCGGCGGACCCTACGACACGGTGCCCGAGGTGATGATCCTCGAAGCG CTCTTCCGGGGCAATCCCGACAAGTTTGTGCCCATCTTTTTTGACGAAGCCGGTCACCGGGTGGCCACCCAGTACCTGAT GGCGGCCCTGCACGGCGAATTGCCCTTCGAGCAACTGCTGCAGTACCGCGCCGCCGATTCGCACCTGCCCGGTCACCCCG AACTGGGGCTCACCCCCGGCGTCAAATTCAGCTCCGGACGGCTCGGGCACATGTGGCCCTACGTCAACGGCGTGGCGATG GCCAATCCCGATAAGGTCGTCTTCTGCCTGGGTTCGGACGGTTCGCAGCAGGAGGGCAACGACGCGGAAGCCGCCCGCCT TGCTGTCGCCCAAGGGCTCAACGTCAAGCTCATCGTCGACGACAACGACGTGACAATCGCCGGACACCCGTCGAAGTACC TGCCGGGCTTCAGCGTCGCCAAGACCCTGGCGGGCCACGGACTCGCCATCGATGAAGGGGACGGCGAAGATCTCGACGGG TTGTACGCCCGCATTTGTACGGCGATCACCGCCGCCGGCCCGGTCGCCGTCGTCAACAAGCGCCCCATGTGCGTGGGCAT CGACGGCCTCGAGGGTTCGACCCACGGCCACGACGTCATTTCGGTGGATCTGGCGGTTGCTTATCTTGAAAAGCGCGGCC AGAGCGAGGCGGTGAAGTTCCTCAAAAACGTCGCCAAACCCAAGCAGAGCTACACTTTCCTGGGCTCAGGCACCCAGATG GGTTCCAACCGCAACGTCTTCGGCGAGGCGGTGGTGGCGGTGCTGGGCCGCATGGACGCGGCGGAGCGCAAGGCGCGGGT CATGTGCATCGACAGCGACCTCGAAGGCTCCTGCGGTCTGAAGAAGATCCACGACACTTTCCCGGAAATTTTCGTCGCCT CTGGGATCATGGAGCGGGGCAATCTTTCCGCCGCCGCCGGTTTCGGCATGGAGAAGGGCAAGCAGGGCATCTTCGGGACC TTCAGCGCCTTTTTGGAGATGTGCATTTCAGAGATCACCATGGCGCGGCTCAACTACTCGAACGTGCTGTGCCACTTCTC CCACTCCGGCATCGACGACATGGCCGACAACACCTGCCACTTCGGCCTCAACAACTTCTTTGCCGACAACGGCCTGGATG ACGGCTACGAAACCCGGCTCTACTTCCCGGCGGACGCGGCCCAGATGAAAGCCTGCGTGGAGGCGGTCTTCCACCAGCCG GGTTTGCGCTTTATCTTCTCGACGCGCTCCAAGACCCCCAACATCCTGGATGCCGACGGCAAGGACCTGCACGGCGAAGG CTACACTTTTACTCCGGGTGCCGACGAGGTGGTGCGCGAGGGCACGGCGGGCTACATCGTGAGCTTCGGCGAATCGCTTT ACCGGGCGCTCGATGCGGTCGAACGCCTCAAGGAGGAGGGCATCGACGTGGGTCTCATCAACAAGCCGACCCTCAACGTC ATCGACGAAAAGATGCTCGCCAAAGTCGGCAGTTCCCCGATGGTGCTGGTGGTTGAATCGTTCAACCGCCGCACGGGCCT CGGTAGCCGCTTCGGCTCCTGGCTGTTGGAGCGCGGTTACGCCCCCAAATTCGCCCACCTGGGCACCCACAAAGAAGGCT GCGGCGGCCTGTGGGAGCAGTTCCCGCACCAGGGTATCGACCCGGTGGGGATCATAGCCAAGGTGAAGGAACTGGTGGGC TAG
Upstream 100 bases:
>100_bases CGAGGTTTTCCTGGAAACCGATGCTTGATACGCGGGCGCAAATCCGCTCAGCGAGAGCATCGCAATCGTCACATCCCCGA CTGACGGCACCTTAAATAGG
Downstream 100 bases:
>100_bases GGGACTTTTGCGAACCGATTTACTCGTGTCGCGCAAATCGGTTCGCGAATTACTCATCTCATCCAGATAGAAGGCCGACG GTAACTCAAAGGTTGTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MWIMTTTTVRFPIDISAYKPLALDFANPVLSAEQRETLRANIQFCRDAIVFFTATGAARGVGGHTGGPYDTVPEVMILEA LFRGNPDKFVPIFFDEAGHRVATQYLMAALHGELPFEQLLQYRAADSHLPGHPELGLTPGVKFSSGRLGHMWPYVNGVAM ANPDKVVFCLGSDGSQQEGNDAEAARLAVAQGLNVKLIVDDNDVTIAGHPSKYLPGFSVAKTLAGHGLAIDEGDGEDLDG LYARICTAITAAGPVAVVNKRPMCVGIDGLEGSTHGHDVISVDLAVAYLEKRGQSEAVKFLKNVAKPKQSYTFLGSGTQM GSNRNVFGEAVVAVLGRMDAAERKARVMCIDSDLEGSCGLKKIHDTFPEIFVASGIMERGNLSAAAGFGMEKGKQGIFGT FSAFLEMCISEITMARLNYSNVLCHFSHSGIDDMADNTCHFGLNNFFADNGLDDGYETRLYFPADAAQMKACVEAVFHQP GLRFIFSTRSKTPNILDADGKDLHGEGYTFTPGADEVVREGTAGYIVSFGESLYRALDAVERLKEEGIDVGLINKPTLNV IDEKMLAKVGSSPMVLVVESFNRRTGLGSRFGSWLLERGYAPKFAHLGTHKEGCGGLWEQFPHQGIDPVGIIAKVKELVG
Sequences:
>Translated_640_residues MWIMTTTTVRFPIDISAYKPLALDFANPVLSAEQRETLRANIQFCRDAIVFFTATGAARGVGGHTGGPYDTVPEVMILEA LFRGNPDKFVPIFFDEAGHRVATQYLMAALHGELPFEQLLQYRAADSHLPGHPELGLTPGVKFSSGRLGHMWPYVNGVAM ANPDKVVFCLGSDGSQQEGNDAEAARLAVAQGLNVKLIVDDNDVTIAGHPSKYLPGFSVAKTLAGHGLAIDEGDGEDLDG LYARICTAITAAGPVAVVNKRPMCVGIDGLEGSTHGHDVISVDLAVAYLEKRGQSEAVKFLKNVAKPKQSYTFLGSGTQM GSNRNVFGEAVVAVLGRMDAAERKARVMCIDSDLEGSCGLKKIHDTFPEIFVASGIMERGNLSAAAGFGMEKGKQGIFGT FSAFLEMCISEITMARLNYSNVLCHFSHSGIDDMADNTCHFGLNNFFADNGLDDGYETRLYFPADAAQMKACVEAVFHQP GLRFIFSTRSKTPNILDADGKDLHGEGYTFTPGADEVVREGTAGYIVSFGESLYRALDAVERLKEEGIDVGLINKPTLNV IDEKMLAKVGSSPMVLVVESFNRRTGLGSRFGSWLLERGYAPKFAHLGTHKEGCGGLWEQFPHQGIDPVGIIAKVKELVG >Mature_640_residues MWIMTTTTVRFPIDISAYKPLALDFANPVLSAEQRETLRANIQFCRDAIVFFTATGAARGVGGHTGGPYDTVPEVMILEA LFRGNPDKFVPIFFDEAGHRVATQYLMAALHGELPFEQLLQYRAADSHLPGHPELGLTPGVKFSSGRLGHMWPYVNGVAM ANPDKVVFCLGSDGSQQEGNDAEAARLAVAQGLNVKLIVDDNDVTIAGHPSKYLPGFSVAKTLAGHGLAIDEGDGEDLDG LYARICTAITAAGPVAVVNKRPMCVGIDGLEGSTHGHDVISVDLAVAYLEKRGQSEAVKFLKNVAKPKQSYTFLGSGTQM GSNRNVFGEAVVAVLGRMDAAERKARVMCIDSDLEGSCGLKKIHDTFPEIFVASGIMERGNLSAAAGFGMEKGKQGIFGT FSAFLEMCISEITMARLNYSNVLCHFSHSGIDDMADNTCHFGLNNFFADNGLDDGYETRLYFPADAAQMKACVEAVFHQP GLRFIFSTRSKTPNILDADGKDLHGEGYTFTPGADEVVREGTAGYIVSFGESLYRALDAVERLKEEGIDVGLINKPTLNV IDEKMLAKVGSSPMVLVVESFNRRTGLGSRFGSWLLERGYAPKFAHLGTHKEGCGGLWEQFPHQGIDPVGIIAKVKELVG
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=537, Percent_Identity=23.8361266294227, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI4507521, Length=537, Percent_Identity=23.8361266294227, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI133778974, Length=526, Percent_Identity=24.5247148288973, Blast_Score=73, Evalue=6e-13, Organism=Escherichia coli, GI1788808, Length=226, Percent_Identity=29.2035398230088, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17539652, Length=506, Percent_Identity=26.2845849802372, Blast_Score=107, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6325331, Length=245, Percent_Identity=31.8367346938775, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6319593, Length=256, Percent_Identity=28.515625, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI24666278, Length=537, Percent_Identity=24.5810055865922, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI24645119, Length=550, Percent_Identity=24.7272727272727, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI45551847, Length=550, Percent_Identity=24.7272727272727, Blast_Score=94, Evalue=4e-19, Organism=Drosophila melanogaster, GI45550715, Length=550, Percent_Identity=24.7272727272727, Blast_Score=94, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 68992; Mature: 68992
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIMTTTTVRFPIDISAYKPLALDFANPVLSAEQRETLRANIQFCRDAIVFFTATGAARG CEEEEEEEEEEEEEECCCCCEEHHHCCHHHCHHHHHHHHHHHHHHHHEEEEEEECCCCCC VGGHTGGPYDTVPEVMILEALFRGNPDKFVPIFFDEAGHRVATQYLMAALHGELPFEQLL CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHH QYRAADSHLPGHPELGLTPGVKFSSGRLGHMWPYVNGVAMANPDKVVFCLGSDGSQQEGN HHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCC DAEAARLAVAQGLNVKLIVDDNDVTIAGHPSKYLPGFSVAKTLAGHGLAIDEGDGEDLDG CHHHHHHHHHCCCEEEEEEECCCEEEECCCHHHCCCHHHHHHHCCCCEEEECCCCCCHHH LYARICTAITAAGPVAVVNKRPMCVGIDGLEGSTHGHDVISVDLAVAYLEKRGQSEAVKF HHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHH LKNVAKPKQSYTFLGSGTQMGSNRNVFGEAVVAVLGRMDAAERKARVMCIDSDLEGSCGL HHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCCCH KKIHDTFPEIFVASGIMERGNLSAAAGFGMEKGKQGIFGTFSAFLEMCISEITMARLNYS HHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC NVLCHFSHSGIDDMADNTCHFGLNNFFADNGLDDGYETRLYFPADAAQMKACVEAVFHQP CEEEEECCCCCCHHCCCCEECCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC GLRFIFSTRSKTPNILDADGKDLHGEGYTFTPGADEVVREGTAGYIVSFGESLYRALDAV CCEEEEECCCCCCCEECCCCCCCCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHH ERLKEEGIDVGLINKPTLNVIDEKMLAKVGSSPMVLVVESFNRRTGLGSRFGSWLLERGY HHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCC APKFAHLGTHKEGCGGLWEQFPHQGIDPVGIIAKVKELVG CCCHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure MWIMTTTTVRFPIDISAYKPLALDFANPVLSAEQRETLRANIQFCRDAIVFFTATGAARG CEEEEEEEEEEEEEECCCCCEEHHHCCHHHCHHHHHHHHHHHHHHHHEEEEEEECCCCCC VGGHTGGPYDTVPEVMILEALFRGNPDKFVPIFFDEAGHRVATQYLMAALHGELPFEQLL CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHH QYRAADSHLPGHPELGLTPGVKFSSGRLGHMWPYVNGVAMANPDKVVFCLGSDGSQQEGN HHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCC DAEAARLAVAQGLNVKLIVDDNDVTIAGHPSKYLPGFSVAKTLAGHGLAIDEGDGEDLDG CHHHHHHHHHCCCEEEEEEECCCEEEECCCHHHCCCHHHHHHHCCCCEEEECCCCCCHHH LYARICTAITAAGPVAVVNKRPMCVGIDGLEGSTHGHDVISVDLAVAYLEKRGQSEAVKF HHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHH LKNVAKPKQSYTFLGSGTQMGSNRNVFGEAVVAVLGRMDAAERKARVMCIDSDLEGSCGL HHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCCCH KKIHDTFPEIFVASGIMERGNLSAAAGFGMEKGKQGIFGTFSAFLEMCISEITMARLNYS HHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC NVLCHFSHSGIDDMADNTCHFGLNNFFADNGLDDGYETRLYFPADAAQMKACVEAVFHQP CEEEEECCCCCCHHCCCCEECCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCC GLRFIFSTRSKTPNILDADGKDLHGEGYTFTPGADEVVREGTAGYIVSFGESLYRALDAV CCEEEEECCCCCCCEECCCCCCCCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHH ERLKEEGIDVGLINKPTLNVIDEKMLAKVGSSPMVLVVESFNRRTGLGSRFGSWLLERGY HHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCC APKFAHLGTHKEGCGGLWEQFPHQGIDPVGIIAKVKELVG CCCHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]