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The map label for this gene is ygaF [H]

Identifier: 37522958

GI number: 37522958

Start: 3595762

End: 3596304

Strand: Direct

Name: ygaF [H]

Synonym: glr3389

Alternate gene names: 37522958

Gene position: 3595762-3596304 (Clockwise)

Preceding gene: 37522957

Following gene: 37522959

Centisome position: 77.18

GC content: 62.06

Gene sequence:

>543_bases
ATGCGTAAATTGCTGCTGAAATCCTCTTTGCTCTTTGCTCTCCTGCTCGCAGGTCCACAGGCGGCCCTGCTGGCTGCTCC
CCGGGTGGGCGAGGCCGCTCCCGCCTTCGAGCTGCCGGTGGCGGCGGGTAAAAAAATCTCGCTCAAAGACTTCCAGGGCA
AGTGGCTGGTGCTCTACTTCTACCCCAAGGACATGACCAGCGGCTGCACCATCGAGGCGCAGCGCTTTCAAAAAGACTTG
GCCCAGTACAAGCAGCTGGGCGCCGAGATTGTCGGAGTGAGCGCCGACGCCCTCGACTCCCACAGCATGTTCAGCAAAAA
AGAGGGTCTCACCTTCTTGCTCGCCTCCGACGTGGGAGGAAAGGTGGCCCAGGCCTACGACTCCTGGTACGGCCTGGGCG
ATATGGGCATGGCGGCCCGCAACACCTACCTCATCGACCCCCAGGGGCGGGTGGCGAAGGTCTTCTCCAATGTCGACCCG
ACCGGCCATAGCCGGGAGGTGCTCTCCACCCTCAAGCAAATCCAAGCCAAGGCACAGCGCTGA

Upstream 100 bases:

>100_bases
TCGGGGCAAAGAAGCCTACCGCGGCAGCGGTCAGATTCCCCAGACGGTTTTCGAGTCCGAGTTCAAAAAAGTGCTTTGAA
GCTAAAAAAGGCGTGCACCC

Downstream 100 bases:

>100_bases
TGAACGCGGTTCAGGAACTATTCGACCAGAGCATCCAGCGCTACGAGGCGGGCGAAGCGGCCGACGTGCTGCTGCCGGTA
TTCCGCGAGATTGCCGAGAA

Product: bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRKLLLKSSLLFALLLAGPQAALLAAPRVGEAAPAFELPVAAGKKISLKDFQGKWLVLYFYPKDMTSGCTIEAQRFQKDL
AQYKQLGAEIVGVSADALDSHSMFSKKEGLTFLLASDVGGKVAQAYDSWYGLGDMGMAARNTYLIDPQGRVAKVFSNVDP
TGHSREVLSTLKQIQAKAQR

Sequences:

>Translated_180_residues
MRKLLLKSSLLFALLLAGPQAALLAAPRVGEAAPAFELPVAAGKKISLKDFQGKWLVLYFYPKDMTSGCTIEAQRFQKDL
AQYKQLGAEIVGVSADALDSHSMFSKKEGLTFLLASDVGGKVAQAYDSWYGLGDMGMAARNTYLIDPQGRVAKVFSNVDP
TGHSREVLSTLKQIQAKAQR
>Mature_180_residues
MRKLLLKSSLLFALLLAGPQAALLAAPRVGEAAPAFELPVAAGKKISLKDFQGKWLVLYFYPKDMTSGCTIEAQRFQKDL
AQYKQLGAEIVGVSADALDSHSMFSKKEGLTFLLASDVGGKVAQAYDSWYGLGDMGMAARNTYLIDPQGRVAKVFSNVDP
TGHSREVLSTLKQIQAKAQR

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI5802974, Length=186, Percent_Identity=32.7956989247312, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI32189392, Length=159, Percent_Identity=32.7044025157233, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI4505591, Length=162, Percent_Identity=32.0987654320988, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI32455266, Length=162, Percent_Identity=32.0987654320988, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI32455264, Length=162, Percent_Identity=32.0987654320988, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI32483377, Length=140, Percent_Identity=33.5714285714286, Blast_Score=74, Evalue=6e-14,
Organism=Homo sapiens, GI5453549, Length=163, Percent_Identity=29.4478527607362, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1788825, Length=150, Percent_Identity=35.3333333333333, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1786822, Length=136, Percent_Identity=28.6764705882353, Blast_Score=64, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17554494, Length=142, Percent_Identity=35.2112676056338, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193204376, Length=160, Percent_Identity=29.375, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32565831, Length=160, Percent_Identity=29.375, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17738015, Length=172, Percent_Identity=35.4651162790698, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24656348, Length=158, Percent_Identity=32.2784810126582, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI17864676, Length=158, Percent_Identity=32.2784810126582, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI17157991, Length=162, Percent_Identity=32.7160493827161, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641739, Length=162, Percent_Identity=32.7160493827161, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 19512; Mature: 19512

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLLKSSLLFALLLAGPQAALLAAPRVGEAAPAFELPVAAGKKISLKDFQGKWLVLYF
CCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCEECCCCCCCEEEEEECCCCEEEEEE
YPKDMTSGCTIEAQRFQKDLAQYKQLGAEIVGVSADALDSHSMFSKKEGLTFLLASDVGG
ECCCCCCCCEEEHHHHHHHHHHHHHHCHHEEECCHHHCCCHHHHHHHCCCEEEEECCCCC
KVAQAYDSWYGLGDMGMAARNTYLIDPQGRVAKVFSNVDPTGHSREVLSTLKQIQAKAQR
HHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKLLLKSSLLFALLLAGPQAALLAAPRVGEAAPAFELPVAAGKKISLKDFQGKWLVLYF
CCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCEECCCCCCCEEEEEECCCCEEEEEE
YPKDMTSGCTIEAQRFQKDLAQYKQLGAEIVGVSADALDSHSMFSKKEGLTFLLASDVGG
ECCCCCCCCEEEHHHHHHHHHHHHHHCHHEEECCHHHCCCHHHHHHHCCCEEEEECCCCC
KVAQAYDSWYGLGDMGMAARNTYLIDPQGRVAKVFSNVDPTGHSREVLSTLKQIQAKAQR
HHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]