| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yajQ [C]
Identifier: 37522955
GI number: 37522955
Start: 3594100
End: 3594591
Strand: Direct
Name: yajQ [C]
Synonym: glr3386
Alternate gene names: 37522955
Gene position: 3594100-3594591 (Clockwise)
Preceding gene: 37522952
Following gene: 37522957
Centisome position: 77.14
GC content: 60.37
Gene sequence:
>492_bases ATGGCTGCCCAAACCTATTCATTCGATGTGGTCTCCGATTTTGACCGCCAGGAGCTGGTCAACGCCGTCGACCAAGCCCT GCGCGAGATCAACAGCCGCTACGACCTCAAAGACACCAAGTCCGAAATCGCCCTCGAAGAGGAGCAGATCGTCATCAACA CCGCGAGCGAACTGAGCCTCAACGCCATCTACGACGTGCTTTGCACCAAGGCCGCCAAGCGCAACCTGTCGCTGAAGATT TTTGCGCCGGGCAAGGTGGAGAGCGCCTCGGGCAACCGGGTACGCCAGAGCGTCGCGTTGCAGCGCGGCCTCAGCCAGGA GTTGGCCAAGCAGATCACCAAGCTCATCCGCGACAACACCAAGACCACCCCGCAGATACAGGGGGACGCCGTCCGGGTGA GCAGCAAGAGCCGCGACGATCTGCAGACGGTCATCCAGCTGCTCAAAAGCCAGGACTATCCGGTGCCGCTGCAGTTTACC AACTACCGTTGA
Upstream 100 bases:
>100_bases TAAGCAGGCACAGGCAAACTCCCAGACAACGCCTCCATGATAAGAAACAGACCGGCAGCCGCCGCGCCGCGTGCTAACAC AGAAAAAACAACCGATCACC
Downstream 100 bases:
>100_bases GGTCGGCTGGACCGTTCGGCAGTTGGGCTATCGGGCTGTCGAAATCCACCTCGCCCAAAAACTGCACGCCCAAGGTCTGC ATCGGCTCCAGGCTCGCCGC
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAAQTYSFDVVSDFDRQELVNAVDQALREINSRYDLKDTKSEIALEEEQIVINTASELSLNAIYDVLCTKAAKRNLSLKI FAPGKVESASGNRVRQSVALQRGLSQELAKQITKLIRDNTKTTPQIQGDAVRVSSKSRDDLQTVIQLLKSQDYPVPLQFT NYR
Sequences:
>Translated_163_residues MAAQTYSFDVVSDFDRQELVNAVDQALREINSRYDLKDTKSEIALEEEQIVINTASELSLNAIYDVLCTKAAKRNLSLKI FAPGKVESASGNRVRQSVALQRGLSQELAKQITKLIRDNTKTTPQIQGDAVRVSSKSRDDLQTVIQLLKSQDYPVPLQFT NYR >Mature_162_residues AAQTYSFDVVSDFDRQELVNAVDQALREINSRYDLKDTKSEIALEEEQIVINTASELSLNAIYDVLCTKAAKRNLSLKIF APGKVESASGNRVRQSVALQRGLSQELAKQITKLIRDNTKTTPQIQGDAVRVSSKSRDDLQTVIQLLKSQDYPVPLQFTN YR
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=38.0368098159509, Blast_Score=100, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 18308; Mature: 18177
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQTYSFDVVSDFDRQELVNAVDQALREINSRYDLKDTKSEIALEEEQIVINTASELSL CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCCHHHH NAIYDVLCTKAAKRNLSLKIFAPGKVESASGNRVRQSVALQRGLSQELAKQITKLIRDNT HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCC KTTPQIQGDAVRVSSKSRDDLQTVIQLLKSQDYPVPLQFTNYR CCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCC >Mature Secondary Structure AAQTYSFDVVSDFDRQELVNAVDQALREINSRYDLKDTKSEIALEEEQIVINTASELSL CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEECCCHHHH NAIYDVLCTKAAKRNLSLKIFAPGKVESASGNRVRQSVALQRGLSQELAKQITKLIRDNT HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCC KTTPQIQGDAVRVSSKSRDDLQTVIQLLKSQDYPVPLQFTNYR CCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA