Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37522821

Identifier: 37522821

GI number: 37522821

Start: 3458662

End: 3459036

Strand: Direct

Name: 37522821

Synonym: glr3252

Alternate gene names: NA

Gene position: 3458662-3459036 (Clockwise)

Preceding gene: 37522820

Following gene: 37522822

Centisome position: 74.24

GC content: 58.4

Gene sequence:

>375_bases
ATGACCCGACGCTATGCCTTGCGCGATGACCAGTGGGAACGCATCAAAGACCTTCTGCCCGGGCGAGAAGGCACTGTCGG
CGTTACGGCCAAAGATAATCGTCTGTTCGTGGAAGCCGTTTTGTACCGCTATCGCGCAGGTATTCCCTGGCGCGACCTAC
CCGAGCGCTTTGGCGATTTTCGAGTTATACATACACACTTCAGACGCTGGTCCCAATCAGGCGTGTGGCAGCAGGTGTTT
GAGCAGCTGGCGGAGGAGGCCGACAATGAATACGCGATGATTGATTCGACTATCGTCCGCGCCCACCAACACAGTGCGGG
GGCAAAGGGGGGGAGCCTGAGCAAGAGGCAATCGGTCGCAGCCGAGGGGGATTGA

Upstream 100 bases:

>100_bases
AAAGGTAAGCTTAAATACAATCTCTCTCTAATGCTAAGTATTCATCTAGGGCGTGTCATCAATTAGGTAAAGTGGTAGAG
CCAGTGCAGCAGTTCTTGCC

Downstream 100 bases:

>100_bases
GTACGAAGATTCATGCAACGGTCGATGCCCTGGGCAATCCGCTCGGCTTTCACCTGACGCCTGGCCAAGCGTGCGATTTG
GAGGGAGCAGATAGACTATT

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTRRYALRDDQWERIKDLLPGREGTVGVTAKDNRLFVEAVLYRYRAGIPWRDLPERFGDFRVIHTHFRRWSQSGVWQQVF
EQLAEEADNEYAMIDSTIVRAHQHSAGAKGGSLSKRQSVAAEGD

Sequences:

>Translated_124_residues
MTRRYALRDDQWERIKDLLPGREGTVGVTAKDNRLFVEAVLYRYRAGIPWRDLPERFGDFRVIHTHFRRWSQSGVWQQVF
EQLAEEADNEYAMIDSTIVRAHQHSAGAKGGSLSKRQSVAAEGD
>Mature_123_residues
TRRYALRDDQWERIKDLLPGREGTVGVTAKDNRLFVEAVLYRYRAGIPWRDLPERFGDFRVIHTHFRRWSQSGVWQQVFE
QLAEEADNEYAMIDSTIVRAHQHSAGAKGGSLSKRQSVAAEGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To transposase of insertion sequence IS6501 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14334; Mature: 14203

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRYALRDDQWERIKDLLPGREGTVGVTAKDNRLFVEAVLYRYRAGIPWRDLPERFGDF
CCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCH
RVIHTHFRRWSQSGVWQQVFEQLAEEADNEYAMIDSTIVRAHQHSAGAKGGSLSKRQSVA
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHCCC
AEGD
CCCC
>Mature Secondary Structure 
TRRYALRDDQWERIKDLLPGREGTVGVTAKDNRLFVEAVLYRYRAGIPWRDLPERFGDF
CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCH
RVIHTHFRRWSQSGVWQQVFEQLAEEADNEYAMIDSTIVRAHQHSAGAKGGSLSKRQSVA
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHCCC
AEGD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8190622 [H]