| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522822
Identifier: 37522822
GI number: 37522822
Start: 3459231
End: 3459422
Strand: Direct
Name: 37522822
Synonym: gsr3253
Alternate gene names: NA
Gene position: 3459231-3459422 (Clockwise)
Preceding gene: 37522821
Following gene: 37522823
Centisome position: 74.25
GC content: 56.77
Gene sequence:
>192_bases GTGATCCCGCCGAAGCGCAATCGCACGCAGCCGCGCACTTACGACAAGCACTTATACAAAGCCCGTCACCCGATGGAGAA CTTTTTTGCCCGGCTCAAGCAGTATCGGGCGATTGCGACGCGCTACGACAAACGGGCAAGCAATTTTCTCGGAGCGATCC ATCTGGCCGCAGCGGTCATCTGGCTAAATTGA
Upstream 100 bases:
>100_bases ACTATTGGCGGACATCAAGAGCGAGATGTTGATTGCCGACAAGGGTTACGACGCAGATGAGCGGGTCATCAAGCGCCTGG CGGCTTAGGGCAAGACGGCT
Downstream 100 bases:
>100_bases TGACACGCCCTAGAGTAAAATTTAGGGGAGGCAGATCGCTGAGGTGATCCAGTTTGCCTGATGCACAAGGTATTTTACTG ATCTACGACGGCCTGTGCAA
Product: putative transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISCc1 Transposase OrfB; Transposase IS4 Family; Transposase Is4-Like; ISRin4 Transposase OrfB; ISSoc13 Transposase OrfB; Transposase-Like Protein; Insertion Sequence Transposase Protein
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MIPPKRNRTQPRTYDKHLYKARHPMENFFARLKQYRAIATRYDKRASNFLGAIHLAAAVIWLN
Sequences:
>Translated_63_residues MIPPKRNRTQPRTYDKHLYKARHPMENFFARLKQYRAIATRYDKRASNFLGAIHLAAAVIWLN >Mature_63_residues MIPPKRNRTQPRTYDKHLYKARHPMENFFARLKQYRAIATRYDKRASNFLGAIHLAAAVIWLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7528; Mature: 7528
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPKRNRTQPRTYDKHLYKARHPMENFFARLKQYRAIATRYDKRASNFLGAIHLAAAVI CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLN HCC >Mature Secondary Structure MIPPKRNRTQPRTYDKHLYKARHPMENFFARLKQYRAIATRYDKRASNFLGAIHLAAAVI CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLN HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA