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The map label for this gene is pdhB [H]

Identifier: 37522415

GI number: 37522415

Start: 3032535

End: 3033518

Strand: Direct

Name: pdhB [H]

Synonym: glr2846

Alternate gene names: 37522415

Gene position: 3032535-3033518 (Clockwise)

Preceding gene: 37522414

Following gene: 37522416

Centisome position: 65.09

GC content: 59.15

Gene sequence:

>984_bases
ATGCCGGTCAAACTGTTTTACGAAGCGCTCAAAGACGCCATGGCCGAAGAAATGCGCCGCGACCCCAATGTCTACGTCTT
AGGCGAAGATGTCGGACACTACGGCGGCTCCTACAAAGCCACCAAGGACCTCTACAAAGAATTCGGCGAACTGCGATTGC
TAGACACCCCCATCTGCGAAAACGCCTTCACAGGACTGGCCGTCGGCTCCGCCATGACTGGCCTGCGGCCCATCATCGAA
GGGATGAACATGGGCTTTTTGCTGTTGGCCTTCAACCAGATCGCCAACAACGGCGGCATGCTGCGCTACACCAGCGGCGG
ACAGTTCAAAATCCCGATGGTCGTGCGCGGTCCCGGCGGGGTCGGCAAACAACTGGGGGCTGAGCACTCCCAAAGGCTCG
AAGGTTACTTCAACAACGTCCCCGGCCTGAAGATCGTGCACACTTCGACTGTCTACAACGCCAAGGGCCTGCTCAAAGCG
GCGATCCGCGACGACAACCCGGTGATGTTTTTTGAGCATGTGCTGTTGTACAACCTCAAGGAGGATATCCCCGAGGAGGA
ATACCTATTGCCTTTGGACAAAGCCGAAATGGTCAAGGAAGGCCGCGATGTGACGGTGCTGACGTATGGGCGGATGCGCC
ACCACTGCACCGAGGCGCTCCAGGAGCTGGCCGCGCGCGACATCGATGTGGAAGTGATCGACCTGATATCGCTGAAGCCG
CTGGACCTGGAGACGATTGGCCGCTCGCTCAAAAAGACGCACCGGGTGGTGATTGTCGAGGAGGACATGAAATCCGGCGG
GGTGGGTGCGGAGATTGTGGCAAGTATCGACGAGCACTATTTCGACTATCTGGACGCGCCGGTGTTGCGTCTGGCGTCGA
AGGATGTGCCGGTGCCGTACAACGGCCGGATGGAGGCGACGGTGATCCCGCAGCCGCAGGATATCGTCCGGGCCGTCGAG
GAGATGGCACTCCGTGCCCATTAA

Upstream 100 bases:

>100_bases
CGGATCGTCGCGTGCGTTTGACAATCCCGACCGCAGACCGATGCCCACCGCAGCCGCAGCCCAGCCTCCACCCGCCCCGT
ATCCCAGAATGAGTAACCCC

Downstream 100 bases:

>100_bases
GTGTCAAAACCGGGTTTGCACAAACACACCATCGTTGCCAAGGAGCCAGCCATGCAAACGAGTGAAAACCAGGAAATATT
GCCAGTGGCGCAAACTGTTC

Product: pyruvate dehydrogenase E1 beta-subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MPVKLFYEALKDAMAEEMRRDPNVYVLGEDVGHYGGSYKATKDLYKEFGELRLLDTPICENAFTGLAVGSAMTGLRPIIE
GMNMGFLLLAFNQIANNGGMLRYTSGGQFKIPMVVRGPGGVGKQLGAEHSQRLEGYFNNVPGLKIVHTSTVYNAKGLLKA
AIRDDNPVMFFEHVLLYNLKEDIPEEEYLLPLDKAEMVKEGRDVTVLTYGRMRHHCTEALQELAARDIDVEVIDLISLKP
LDLETIGRSLKKTHRVVIVEEDMKSGGVGAEIVASIDEHYFDYLDAPVLRLASKDVPVPYNGRMEATVIPQPQDIVRAVE
EMALRAH

Sequences:

>Translated_327_residues
MPVKLFYEALKDAMAEEMRRDPNVYVLGEDVGHYGGSYKATKDLYKEFGELRLLDTPICENAFTGLAVGSAMTGLRPIIE
GMNMGFLLLAFNQIANNGGMLRYTSGGQFKIPMVVRGPGGVGKQLGAEHSQRLEGYFNNVPGLKIVHTSTVYNAKGLLKA
AIRDDNPVMFFEHVLLYNLKEDIPEEEYLLPLDKAEMVKEGRDVTVLTYGRMRHHCTEALQELAARDIDVEVIDLISLKP
LDLETIGRSLKKTHRVVIVEEDMKSGGVGAEIVASIDEHYFDYLDAPVLRLASKDVPVPYNGRMEATVIPQPQDIVRAVE
EMALRAH
>Mature_326_residues
PVKLFYEALKDAMAEEMRRDPNVYVLGEDVGHYGGSYKATKDLYKEFGELRLLDTPICENAFTGLAVGSAMTGLRPIIEG
MNMGFLLLAFNQIANNGGMLRYTSGGQFKIPMVVRGPGGVGKQLGAEHSQRLEGYFNNVPGLKIVHTSTVYNAKGLLKAA
IRDDNPVMFFEHVLLYNLKEDIPEEEYLLPLDKAEMVKEGRDVTVLTYGRMRHHCTEALQELAARDIDVEVIDLISLKPL
DLETIGRSLKKTHRVVIVEEDMKSGGVGAEIVASIDEHYFDYLDAPVLRLASKDVPVPYNGRMEATVIPQPQDIVRAVEE
MALRAH

Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge

COG id: COG0022

COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 lipoyl-binding domain [H]

Homologues:

Organism=Homo sapiens, GI156564403, Length=319, Percent_Identity=41.3793103448276, Blast_Score=271, Evalue=6e-73,
Organism=Homo sapiens, GI291084858, Length=319, Percent_Identity=39.1849529780564, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI4557353, Length=323, Percent_Identity=34.0557275541796, Blast_Score=202, Evalue=3e-52,
Organism=Homo sapiens, GI34101272, Length=323, Percent_Identity=34.0557275541796, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17538422, Length=319, Percent_Identity=42.3197492163009, Blast_Score=275, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI17506935, Length=296, Percent_Identity=36.8243243243243, Blast_Score=185, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6319698, Length=321, Percent_Identity=45.1713395638629, Blast_Score=278, Evalue=7e-76,
Organism=Drosophila melanogaster, GI21358145, Length=318, Percent_Identity=41.1949685534591, Blast_Score=268, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24650940, Length=318, Percent_Identity=41.1949685534591, Blast_Score=268, Evalue=3e-72,
Organism=Drosophila melanogaster, GI160714832, Length=320, Percent_Identity=36.25, Blast_Score=197, Evalue=6e-51,
Organism=Drosophila melanogaster, GI160714828, Length=320, Percent_Identity=36.25, Blast_Score=197, Evalue=8e-51,
Organism=Drosophila melanogaster, GI24650943, Length=85, Percent_Identity=45.8823529411765, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24650945, Length=85, Percent_Identity=45.8823529411765, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003016
- InterPro:   IPR000089
- InterPro:   IPR011053
- InterPro:   IPR009014
- InterPro:   IPR015941
- InterPro:   IPR005475
- InterPro:   IPR005476 [H]

Pfam domain/function: PF00364 Biotin_lipoyl; PF02779 Transket_pyr; PF02780 Transketolase_C [H]

EC number: =1.2.4.1 [H]

Molecular weight: Translated: 36397; Mature: 36265

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKLFYEALKDAMAEEMRRDPNVYVLGEDVGHYGGSYKATKDLYKEFGELRLLDTPICE
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCHHH
NAFTGLAVGSAMTGLRPIIEGMNMGFLLLAFNQIANNGGMLRYTSGGQFKIPMVVRGPGG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCC
VGKQLGAEHSQRLEGYFNNVPGLKIVHTSTVYNAKGLLKAAIRDDNPVMFFEHVLLYNLK
CCHHHCHHHHHHHHHHHCCCCCEEEEEECCEECHHHHHHHHHCCCCCCHHHHHHHHHHHH
EDIPEEEYLLPLDKAEMVKEGRDVTVLTYGRMRHHCTEALQELAARDIDVEVIDLISLKP
HHCCCCCEECCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCC
LDLETIGRSLKKTHRVVIVEEDMKSGGVGAEIVASIDEHYFDYLDAPVLRLASKDVPVPY
CCHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC
NGRMEATVIPQPQDIVRAVEEMALRAH
CCEEEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVKLFYEALKDAMAEEMRRDPNVYVLGEDVGHYGGSYKATKDLYKEFGELRLLDTPICE
CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCHHH
NAFTGLAVGSAMTGLRPIIEGMNMGFLLLAFNQIANNGGMLRYTSGGQFKIPMVVRGPGG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCC
VGKQLGAEHSQRLEGYFNNVPGLKIVHTSTVYNAKGLLKAAIRDDNPVMFFEHVLLYNLK
CCHHHCHHHHHHHHHHHCCCCCEEEEEECCEECHHHHHHHHHCCCCCCHHHHHHHHHHHH
EDIPEEEYLLPLDKAEMVKEGRDVTVLTYGRMRHHCTEALQELAARDIDVEVIDLISLKP
HHCCCCCEECCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCC
LDLETIGRSLKKTHRVVIVEEDMKSGGVGAEIVASIDEHYFDYLDAPVLRLASKDVPVPY
CCHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC
NGRMEATVIPQPQDIVRAVEEMALRAH
CCEEEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10796014; 11481430 [H]