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The map label for this gene is panD1

Identifier: 37522414

GI number: 37522414

Start: 3032099

End: 3032455

Strand: Direct

Name: panD1

Synonym: glr2845

Alternate gene names: 37522414

Gene position: 3032099-3032455 (Clockwise)

Preceding gene: 37522413

Following gene: 37522415

Centisome position: 65.08

GC content: 63.03

Gene sequence:

>357_bases
ATGTTGCGGACCGTTTTGTTGAGCAAAATTCACCGCGCTACCGTCACCGGGGCTTGCCTGGAGTACATGGGTTCGATCAG
CCTGGATGCGCAGTTGCTCGCGGCGGCCCACATCTTGGCGTTTGAACAGGTGCATGTCGTCAACCTCAACAATGGAGCGC
GTTTGATCACCTACGCGATCGAGGCGACCGCGGGCTCGGGGGCCGTCGTGCTCAACGGCGCCGCCGCCCGTCTTGCCGCA
CCCGGCGATCGGGTGATCGTGCTTGCCTACGGGCAGGGCACCACCGAGGAATTGGAGAACCACCAACCCCGTGTCGTGCA
CGTCGACACCGGCAATCGGATCGTCGCGTGCGTTTGA

Upstream 100 bases:

>100_bases
CCGCCCCTCGACGAACTCTATCGTTTCCAGTTTGCCGAAGACGATTGATCCACTGCCTAGCGAGCACGAGCCTTGCCTCG
ATGTCAGGAGTTTGAGCACG

Downstream 100 bases:

>100_bases
CAATCCCGACCGCAGACCGATGCCCACCGCAGCCGCAGCCCAGCCTCCACCCGCCCCGTATCCCAGAATGAGTAACCCCA
TGCCGGTCAAACTGTTTTAC

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase 1

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MLRTVLLSKIHRATVTGACLEYMGSISLDAQLLAAAHILAFEQVHVVNLNNGARLITYAIEATAGSGAVVLNGAAARLAA
PGDRVIVLAYGQGTTEELENHQPRVVHVDTGNRIVACV

Sequences:

>Translated_118_residues
MLRTVLLSKIHRATVTGACLEYMGSISLDAQLLAAAHILAFEQVHVVNLNNGARLITYAIEATAGSGAVVLNGAAARLAA
PGDRVIVLAYGQGTTEELENHQPRVVHVDTGNRIVACV
>Mature_118_residues
MLRTVLLSKIHRATVTGACLEYMGSISLDAQLLAAAHILAFEQVHVVNLNNGARLITYAIEATAGSGAVVLNGAAARLAA
PGDRVIVLAYGQGTTEELENHQPRVVHVDTGNRIVACV

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=114, Percent_Identity=41.2280701754386, Blast_Score=86, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND1_GLOVI (Q7NCY1)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_925791.1
- ProteinModelPortal:   Q7NCY1
- SMR:   Q7NCY1
- GeneID:   2601246
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:glr2845
- NMPDR:   fig|251221.1.peg.2845
- HOGENOM:   HBG302821
- OMA:   VMNEQEV
- ProtClustDB:   PRK05449
- BioCyc:   GVIO251221:GLR2845-MONOMER
- BRENDA:   4.1.1.11
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 12384; Mature: 12384

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTVLLSKIHRATVTGACLEYMGSISLDAQLLAAAHILAFEQVHVVNLNNGARLITYAI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEEEEECCCCEEEEEEE
EATAGSGAVVLNGAAARLAAPGDRVIVLAYGQGTTEELENHQPRVVHVDTGNRIVACV
EECCCCCEEEEECCCEEEECCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCEEEEEC
>Mature Secondary Structure
MLRTVLLSKIHRATVTGACLEYMGSISLDAQLLAAAHILAFEQVHVVNLNNGARLITYAI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEEEEECCCCEEEEEEE
EATAGSGAVVLNGAAARLAAPGDRVIVLAYGQGTTEELENHQPRVVHVDTGNRIVACV
EECCCCCEEEEECCCEEEECCCCEEEEEEECCCCHHHHHCCCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292