| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is stp [H]
Identifier: 37522391
GI number: 37522391
Start: 3002869
End: 3004458
Strand: Reverse
Name: stp [H]
Synonym: gll2822
Alternate gene names: 37522391
Gene position: 3004458-3002869 (Counterclockwise)
Preceding gene: 37522392
Following gene: 37522388
Centisome position: 64.49
GC content: 62.14
Gene sequence:
>1590_bases ATGACCAAGCAAGTTGCCCGGAATACCACACGCGACCTGGGTGCCCAGCCCGACAACAAGTGGGCGATCTTACTGGCGGT CAGCATCGGCACTTTTTTGGTGCCGCTCGACATCACTGTGGTCGCCCTGGCCCTACCCGACATCGAAAGCTCGCTGCGCA CGAGCTTTGCCGATCTCCAGTGGATCATCAATGGTTACAACCTGTCATTTACCGCCTTTTTGTTGGCGGCCGGAACGCTG GCGGACCGCTTCGGCCGCCGTCGGCTGTTTCTGGTGGGCCTTGCGCTGTTTACCCTGACTTCGCTCACTTGCGGGCTCGC CACCACCCCCCTGACGCTCACCCTCGCCCGCAGCATCCAGGGGTTGGGCGGTGCGCTGCTGCTCATCTCCTCGCTGGCGA TTCTGTCCCAAACCTTCCGCGAAGGACCGGAGCGAGCCAACGCCTTCGGTGTCTGGGGATTGGTGATGGGGGTGGGCGCA TCGCTCGGGCCGATGATTGGCGGCCTGCTGGTGGATCTGCTCAGCTGGCGGTGGATCTTTTTGCTCAACGTGCCGATCGG TGTCGGCCTAGTCGCCTTTACCTTGAGCAAAGTGGACGAGTCGCGCGATCCCGGAGCGGCCCGGGTCGATTGGCTGGGAT TGACCACATTCACTTCGGCTTTGTTTTCGCTGTGTTTCGCCTTGATCCAGGGCAACGAGCTGGGTTGGACCAGCGCTGCC ATTCTCGGCTTGTTGGCAGCGGCGGCCGTGCTGCTGTTCGCCTTTGCGCTCATTGAGCGGCGGCAGAGCCAGCCGATGTT CGACCTGTCGCTTTTGGGCAACCCCGCCTTTGTGGGTACTTCGTTGCTCGCGGCGAGCAACGGCGCTTCGTTTTGGGCAA TGATCGTCTATCTGCCCCTGTTTTTTCAAAACGTTCTCGGTTACTCGCCTTTGCAAGCCGGGCTGATGCTGTTGCCGCTC ACGGTGCCTTTGCTGGTCTGCCCGCCTCTGGGCGGTCGGCTGGCCCAGGTACTGCCCGCCCGGCTGCTGCTCAGCGGCGG CATGCTCATGGTCGGCCTGGGCTTTGTTTGGATGTACGGGGTCAACGCGGGTTCCCCCTGGACCGCGTTTTTGCCGGGCT TTTTGTTGGCCGGGATCGGAGCCGGGCTGATTAACGCAGAGATCGCGAACGTGGCTATTGCCGTGTTGCCCCCTCAGCGC AGCGGCATGGGTTCGGGAATCACCAGCACCTTTCGCCACGGCGCCCACGCTCTGGGTATCGCGCTACTTGGCTCGCTACT CACCCAGCGGGTTGCCACCAGCCTGGAGCAATCGACCCTACCCGGCCTTGTTACCGAGCGCAGCACGCAACTGGCAAGCC AGATTGCGGCCGGCGACCTGATCGGAGTGGTCCGCACGCTGCCGCCGGAGCTGCAAAACGCGTTTGCCGCAGCGGCCCAA AACAGTTTCATCGACGGTTTTAACCTGATCGTGCTCCTGGCGGCTGCCACGGCGCTGCTGGGTGCCCTGGCCACCTTTGT TCTGGTAAAAGATCAGCGTTCCCAAAGCCAACTCCAAAGACAAGAACGTCCAAGTGCCTCGAAGAGCTAA
Upstream 100 bases:
>100_bases CGCCGACCCACAAACGGCCTGGCAGTTCCTGTACTGGCTGGATGTATTGCCCTTCTAGCCCGATGCGTCTACCCATCAAC CATGAGGAGGTCAAACGCCA
Downstream 100 bases:
>100_bases AAGTCAGCGGCTCCTGCTTGTGGGGTCAGACTGTGCTGCAACCGGTGAGCAGTGCTTTTTGGCCCTTCAGGTTTCCGGAC GGACCTGCCCGGAGATATCG
Product: hypothetical protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Spectinomycin tetracycline efflux pump [H]
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MTKQVARNTTRDLGAQPDNKWAILLAVSIGTFLVPLDITVVALALPDIESSLRTSFADLQWIINGYNLSFTAFLLAAGTL ADRFGRRRLFLVGLALFTLTSLTCGLATTPLTLTLARSIQGLGGALLLISSLAILSQTFREGPERANAFGVWGLVMGVGA SLGPMIGGLLVDLLSWRWIFLLNVPIGVGLVAFTLSKVDESRDPGAARVDWLGLTTFTSALFSLCFALIQGNELGWTSAA ILGLLAAAAVLLFAFALIERRQSQPMFDLSLLGNPAFVGTSLLAASNGASFWAMIVYLPLFFQNVLGYSPLQAGLMLLPL TVPLLVCPPLGGRLAQVLPARLLLSGGMLMVGLGFVWMYGVNAGSPWTAFLPGFLLAGIGAGLINAEIANVAIAVLPPQR SGMGSGITSTFRHGAHALGIALLGSLLTQRVATSLEQSTLPGLVTERSTQLASQIAAGDLIGVVRTLPPELQNAFAAAAQ NSFIDGFNLIVLLAAATALLGALATFVLVKDQRSQSQLQRQERPSASKS
Sequences:
>Translated_529_residues MTKQVARNTTRDLGAQPDNKWAILLAVSIGTFLVPLDITVVALALPDIESSLRTSFADLQWIINGYNLSFTAFLLAAGTL ADRFGRRRLFLVGLALFTLTSLTCGLATTPLTLTLARSIQGLGGALLLISSLAILSQTFREGPERANAFGVWGLVMGVGA SLGPMIGGLLVDLLSWRWIFLLNVPIGVGLVAFTLSKVDESRDPGAARVDWLGLTTFTSALFSLCFALIQGNELGWTSAA ILGLLAAAAVLLFAFALIERRQSQPMFDLSLLGNPAFVGTSLLAASNGASFWAMIVYLPLFFQNVLGYSPLQAGLMLLPL TVPLLVCPPLGGRLAQVLPARLLLSGGMLMVGLGFVWMYGVNAGSPWTAFLPGFLLAGIGAGLINAEIANVAIAVLPPQR SGMGSGITSTFRHGAHALGIALLGSLLTQRVATSLEQSTLPGLVTERSTQLASQIAAGDLIGVVRTLPPELQNAFAAAAQ NSFIDGFNLIVLLAAATALLGALATFVLVKDQRSQSQLQRQERPSASKS >Mature_528_residues TKQVARNTTRDLGAQPDNKWAILLAVSIGTFLVPLDITVVALALPDIESSLRTSFADLQWIINGYNLSFTAFLLAAGTLA DRFGRRRLFLVGLALFTLTSLTCGLATTPLTLTLARSIQGLGGALLLISSLAILSQTFREGPERANAFGVWGLVMGVGAS LGPMIGGLLVDLLSWRWIFLLNVPIGVGLVAFTLSKVDESRDPGAARVDWLGLTTFTSALFSLCFALIQGNELGWTSAAI LGLLAAAAVLLFAFALIERRQSQPMFDLSLLGNPAFVGTSLLAASNGASFWAMIVYLPLFFQNVLGYSPLQAGLMLLPLT VPLLVCPPLGGRLAQVLPARLLLSGGMLMVGLGFVWMYGVNAGSPWTAFLPGFLLAGIGAGLINAEIANVAIAVLPPQRS GMGSGITSTFRHGAHALGIALLGSLLTQRVATSLEQSTLPGLVTERSTQLASQIAAGDLIGVVRTLPPELQNAFAAAAQN SFIDGFNLIVLLAAATALLGALATFVLVKDQRSQSQLQRQERPSASKS
Specific function: Contributes to spectinomycin and tetracycline resistance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=423, Percent_Identity=29.0780141843972, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI87081983, Length=420, Percent_Identity=30.2380952380952, Blast_Score=152, Evalue=7e-38, Organism=Escherichia coli, GI1788710, Length=479, Percent_Identity=26.9311064718163, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1790195, Length=420, Percent_Identity=29.7619047619048, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788392, Length=307, Percent_Identity=35.1791530944625, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1790146, Length=178, Percent_Identity=29.2134831460674, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324954, Length=285, Percent_Identity=28.4210526315789, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6319770, Length=490, Percent_Identity=25.9183673469388, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322958, Length=413, Percent_Identity=24.2130750605327, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6325455, Length=337, Percent_Identity=22.2551928783383, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323735, Length=354, Percent_Identity=25.9887005649718, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6321663, Length=152, Percent_Identity=28.2894736842105, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 55610; Mature: 55479
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQVARNTTRDLGAQPDNKWAILLAVSIGTFLVPLDITVVALALPDIESSLRTSFADLQ CCCHHHHCCHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WIINGYNLSFTAFLLAAGTLADRFGRRRLFLVGLALFTLTSLTCGLATTPLTLTLARSIQ HHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GLGGALLLISSLAILSQTFREGPERANAFGVWGLVMGVGASLGPMIGGLLVDLLSWRWIF CCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LLNVPIGVGLVAFTLSKVDESRDPGAARVDWLGLTTFTSALFSLCFALIQGNELGWTSAA EEECCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ILGLLAAAAVLLFAFALIERRQSQPMFDLSLLGNPAFVGTSLLAASNGASFWAMIVYLPL HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH FFQNVLGYSPLQAGLMLLPLTVPLLVCPPLGGRLAQVLPARLLLSGGMLMVGLGFVWMYG HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC VNAGSPWTAFLPGFLLAGIGAGLINAEIANVAIAVLPPQRSGMGSGITSTFRHGAHALGI CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHH ALLGSLLTQRVATSLEQSTLPGLVTERSTQLASQIAAGDLIGVVRTLPPELQNAFAAAAQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NSFIDGFNLIVLLAAATALLGALATFVLVKDQRSQSQLQRQERPSASKS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKQVARNTTRDLGAQPDNKWAILLAVSIGTFLVPLDITVVALALPDIESSLRTSFADLQ CCHHHHCCHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WIINGYNLSFTAFLLAAGTLADRFGRRRLFLVGLALFTLTSLTCGLATTPLTLTLARSIQ HHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GLGGALLLISSLAILSQTFREGPERANAFGVWGLVMGVGASLGPMIGGLLVDLLSWRWIF CCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LLNVPIGVGLVAFTLSKVDESRDPGAARVDWLGLTTFTSALFSLCFALIQGNELGWTSAA EEECCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ILGLLAAAAVLLFAFALIERRQSQPMFDLSLLGNPAFVGTSLLAASNGASFWAMIVYLPL HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH FFQNVLGYSPLQAGLMLLPLTVPLLVCPPLGGRLAQVLPARLLLSGGMLMVGLGFVWMYG HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC VNAGSPWTAFLPGFLLAGIGAGLINAEIANVAIAVLPPQRSGMGSGITSTFRHGAHALGI CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHH ALLGSLLTQRVATSLEQSTLPGLVTERSTQLASQIAAGDLIGVVRTLPPELQNAFAAAAQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH NSFIDGFNLIVLLAAATALLGALATFVLVKDQRSQSQLQRQERPSASKS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]