Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is dps [C]

Identifier: 37522388

GI number: 37522388

Start: 2997200

End: 2997745

Strand: Reverse

Name: dps [C]

Synonym: gll2819

Alternate gene names: 37522388

Gene position: 2997745-2997200 (Counterclockwise)

Preceding gene: 37522391

Following gene: 37522387

Centisome position: 64.34

GC content: 59.52

Gene sequence:

>546_bases
ATGCCTAAATTGAACATTGGCCTGAGCACCGAACAGCGCGAGGGGGTCATCGACCTGCTCAATCGGGATCTTTCCGATGC
CTACCTGGTGCTCATCAAGACCAAGAAGTACCACTGGGACGTGGTGGGTCCCCAGTTTCGTTCGCTCCATACCCTCTGGG
AAGAGCAGTACGAAGCGTTGACCACCAATATCGATGCGCTCGCAGAACGCGTACGGGCCCTGGGCGGCTATCCGGTCGGT
ACCGCCAAGGGCTTTCTTGAGTATGCCTCGGTCAACGAGCACGCCGGCGATATCCCGAACGCCCAGGGTATGGTATCCAA
CCTGCTTGCCGACCACGAGCTGATCATCCGCAACCTGCGCGAGCACGTCGATGCCTGTTCTGAGAAGTTCGGCGACGAAG
GGACGGCGGACTTTTTGACCGGCCTGATGGAACAGCACGAGGAGATGGCCTGGATGTTGCGCTCGTTTATCGAGGGCGAA
TCGATCGAGCCTACTCCCAGCCGCACCCCTGGGTCGGATGTGCGCGCCCATGCCGAGCTGAAGTAA

Upstream 100 bases:

>100_bases
TGCAGCTCCACACCAGTATCGGCCCCGGGGGAGATGTCTGCATAGTGCCCTAGTTGTTTGACTGGATTGGGCAAGAATAG
AAATTGGAGAGCGTAGAGCC

Downstream 100 bases:

>100_bases
GATTGCGGGCGCTTGGTGCCGATGGGAGGCGCCCGGCGCCTCCTATTTAATCTATGGTGATTATCGTGCTGGGTGTCTCC
GGTGCGGGCAAGAGCCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MPKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEALTTNIDALAERVRALGGYPVG
TAKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLREHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGE
SIEPTPSRTPGSDVRAHAELK

Sequences:

>Translated_181_residues
MPKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEALTTNIDALAERVRALGGYPVG
TAKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLREHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGE
SIEPTPSRTPGSDVRAHAELK
>Mature_180_residues
PKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEALTTNIDALAERVRALGGYPVGT
AKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLREHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGES
IEPTPSRTPGSDVRAHAELK

Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

Organism=Escherichia coli, GI1787032, Length=151, Percent_Identity=25.8278145695364, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 20278; Mature: 20147

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEAL
CCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHH
TTNIDALAERVRALGGYPVGTAKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLR
HCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
EHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGESIEPTPSRTPGSDVRAHAEL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
K
C
>Mature Secondary Structure 
PKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEAL
CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHH
TTNIDALAERVRALGGYPVGTAKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLR
HCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
EHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGESIEPTPSRTPGSDVRAHAEL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA