| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is dps [C]
Identifier: 37522388
GI number: 37522388
Start: 2997200
End: 2997745
Strand: Reverse
Name: dps [C]
Synonym: gll2819
Alternate gene names: 37522388
Gene position: 2997745-2997200 (Counterclockwise)
Preceding gene: 37522391
Following gene: 37522387
Centisome position: 64.34
GC content: 59.52
Gene sequence:
>546_bases ATGCCTAAATTGAACATTGGCCTGAGCACCGAACAGCGCGAGGGGGTCATCGACCTGCTCAATCGGGATCTTTCCGATGC CTACCTGGTGCTCATCAAGACCAAGAAGTACCACTGGGACGTGGTGGGTCCCCAGTTTCGTTCGCTCCATACCCTCTGGG AAGAGCAGTACGAAGCGTTGACCACCAATATCGATGCGCTCGCAGAACGCGTACGGGCCCTGGGCGGCTATCCGGTCGGT ACCGCCAAGGGCTTTCTTGAGTATGCCTCGGTCAACGAGCACGCCGGCGATATCCCGAACGCCCAGGGTATGGTATCCAA CCTGCTTGCCGACCACGAGCTGATCATCCGCAACCTGCGCGAGCACGTCGATGCCTGTTCTGAGAAGTTCGGCGACGAAG GGACGGCGGACTTTTTGACCGGCCTGATGGAACAGCACGAGGAGATGGCCTGGATGTTGCGCTCGTTTATCGAGGGCGAA TCGATCGAGCCTACTCCCAGCCGCACCCCTGGGTCGGATGTGCGCGCCCATGCCGAGCTGAAGTAA
Upstream 100 bases:
>100_bases TGCAGCTCCACACCAGTATCGGCCCCGGGGGAGATGTCTGCATAGTGCCCTAGTTGTTTGACTGGATTGGGCAAGAATAG AAATTGGAGAGCGTAGAGCC
Downstream 100 bases:
>100_bases GATTGCGGGCGCTTGGTGCCGATGGGAGGCGCCCGGCGCCTCCTATTTAATCTATGGTGATTATCGTGCTGGGTGTCTCC GGTGCGGGCAAGAGCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MPKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEALTTNIDALAERVRALGGYPVG TAKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLREHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGE SIEPTPSRTPGSDVRAHAELK
Sequences:
>Translated_181_residues MPKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEALTTNIDALAERVRALGGYPVG TAKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLREHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGE SIEPTPSRTPGSDVRAHAELK >Mature_180_residues PKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEALTTNIDALAERVRALGGYPVGT AKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLREHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGES IEPTPSRTPGSDVRAHAELK
Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
Organism=Escherichia coli, GI1787032, Length=151, Percent_Identity=25.8278145695364, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 20278; Mature: 20147
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEAL CCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHH TTNIDALAERVRALGGYPVGTAKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLR HCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH EHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGESIEPTPSRTPGSDVRAHAEL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC K C >Mature Secondary Structure PKLNIGLSTEQREGVIDLLNRDLSDAYLVLIKTKKYHWDVVGPQFRSLHTLWEEQYEAL CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHH TTNIDALAERVRALGGYPVGTAKGFLEYASVNEHAGDIPNAQGMVSNLLADHELIIRNLR HCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH EHVDACSEKFGDEGTADFLTGLMEQHEEMAWMLRSFIEGESIEPTPSRTPGSDVRAHAEL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA