| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is hisZ
Identifier: 37521959
GI number: 37521959
Start: 2550809
End: 2551987
Strand: Direct
Name: hisZ
Synonym: gvip334
Alternate gene names: 37521959
Gene position: 2550809-2551987 (Clockwise)
Preceding gene: 37521958
Following gene: 37521960
Centisome position: 54.75
GC content: 67.68
Gene sequence:
>1179_bases ATGTACCAACCGCCGACCGGGGTGCGCGACTTGCTGCCCCTCGACGTCTCGCAAAAGCTCTGGATCGAACAGCGCCTGCA GCGGGTGTTCACCCGCTGGGGCTACCAGCGCATCATCACTCCGACCCTCGAACGGATGGAGACGCTGCAGGCGAGCGGTT CGGTCGACCTGCAGGCGATCTTGCAGCTGCGCGACGCCGAGGGGGTGTCGCTGGGCCTCAGACCCGACCCGACGCCGTCG CTGGCGCGGGCGGTGGCCACGCGCCTTGCCGATGCGCCCTTGCCGGTGCGGCTCTCGTATCAGATGAACGTCTTTCGCAG CACCACGCAGCCGCAGGAATTTTACCAGGCCGGGGTGGAACTGATCGGCGCGGGCGGGGTGCTCGCCGACGCCGAGGTGC TGCTTGTACTCGCCGAGTGCCTGGCCGAACTGGCTCCGCCAGATTGGACGCTGATTTTGGGCGCGGTCGCGTTTACCCGT TCGTGGCTTGCCCAGGTGGCAGAACCCGCCCGCCACCGGCTGCGCCGGGCGATGGCCGAACTCGACCGCGTGGCGATTCT TGCTGAAGCGGGCATCGACGAGGCGGTCAGATCCCAGTTGTTGTTGTTGTTTGACCTGCGCGGCGAACCGGAAATGGTGC TCAGCAAGGCGTCCTCGCTGCCGATGAGCGACGCCCAGCGCGCGGAACTCGCCGAACTGGAGACGCTCACCGGCTGGCTG AGGGGCCGCTCGGTGCCGGTGGTGCTCGATTTGAGCCTGGTCGAAGCGTTCGATTACTACACGGGCCTCATCTTCGAGGT GAGCGCCGGGGGGCGTCTGATCGGCCGTGGGGGCCGCTATGACCATCTGCTGGGTTCCTACGGCAAACCGGCGCCGGGGG CGGGCTTTGCCCTGAACCTCGAAGCGCTCCAGCAGGTACTCTTGCCCACCGGCAAACTGCCCGGCCGCACGGTGGGGGGT GGCTTTTTGGTGGTGCCCGACGGGCCGGACGCCTGGGAGGCGGCCCTGGCTGAGGCGGATAAGCTGCGCTGCGCTCCCGG CGAGCGGGTGGAGATTGAACTGTTGGGCCGCACCGGTGAGGAGGCAATTGCCCACGGTCGGGCTCTGGGTGCGGCCGTCG TGCGCTGGGTTCACCCCGACGGTAGTACCACCGATTGCGACCTTGCGGTCATACAGTGA
Upstream 100 bases:
>100_bases CCAATCCGACAAGCTGCTCATCAAAGCAAAGGCGCTTTCCGGCAGGCTAATCTCCCCCACCCCAGCCGTACAGTAGGAAA GGACACAACTCGGTTCTCCC
Downstream 100 bases:
>100_bases TACCTGCCACCCACAAAACTGAAAAAATACGAACCGACAATCGGTCTAACGCGCTTTTGGTGATGCAGGAAAATAAGTAC CATGACTGACCGTCGCTATG
Product: ATP phosphoribosyltransferase regulatory subunit
Products: AMP; diphosphate +L-histidyl-tRNAHis [C]
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MYQPPTGVRDLLPLDVSQKLWIEQRLQRVFTRWGYQRIITPTLERMETLQASGSVDLQAILQLRDAEGVSLGLRPDPTPS LARAVATRLADAPLPVRLSYQMNVFRSTTQPQEFYQAGVELIGAGGVLADAEVLLVLAECLAELAPPDWTLILGAVAFTR SWLAQVAEPARHRLRRAMAELDRVAILAEAGIDEAVRSQLLLLFDLRGEPEMVLSKASSLPMSDAQRAELAELETLTGWL RGRSVPVVLDLSLVEAFDYYTGLIFEVSAGGRLIGRGGRYDHLLGSYGKPAPGAGFALNLEALQQVLLPTGKLPGRTVGG GFLVVPDGPDAWEAALAEADKLRCAPGERVEIELLGRTGEEAIAHGRALGAAVVRWVHPDGSTTDCDLAVIQ
Sequences:
>Translated_392_residues MYQPPTGVRDLLPLDVSQKLWIEQRLQRVFTRWGYQRIITPTLERMETLQASGSVDLQAILQLRDAEGVSLGLRPDPTPS LARAVATRLADAPLPVRLSYQMNVFRSTTQPQEFYQAGVELIGAGGVLADAEVLLVLAECLAELAPPDWTLILGAVAFTR SWLAQVAEPARHRLRRAMAELDRVAILAEAGIDEAVRSQLLLLFDLRGEPEMVLSKASSLPMSDAQRAELAELETLTGWL RGRSVPVVLDLSLVEAFDYYTGLIFEVSAGGRLIGRGGRYDHLLGSYGKPAPGAGFALNLEALQQVLLPTGKLPGRTVGG GFLVVPDGPDAWEAALAEADKLRCAPGERVEIELLGRTGEEAIAHGRALGAAVVRWVHPDGSTTDCDLAVIQ >Mature_392_residues MYQPPTGVRDLLPLDVSQKLWIEQRLQRVFTRWGYQRIITPTLERMETLQASGSVDLQAILQLRDAEGVSLGLRPDPTPS LARAVATRLADAPLPVRLSYQMNVFRSTTQPQEFYQAGVELIGAGGVLADAEVLLVLAECLAELAPPDWTLILGAVAFTR SWLAQVAEPARHRLRRAMAELDRVAILAEAGIDEAVRSQLLLLFDLRGEPEMVLSKASSLPMSDAQRAELAELETLTGWL RGRSVPVVLDLSLVEAFDYYTGLIFEVSAGGRLIGRGGRYDHLLGSYGKPAPGAGFALNLEALQQVLLPTGKLPGRTVGG GFLVVPDGPDAWEAALAEADKLRCAPGERVEIELLGRTGEEAIAHGRALGAAVVRWVHPDGSTTDCDLAVIQ
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily
Homologues:
Organism=Homo sapiens, GI6996014, Length=336, Percent_Identity=25.5952380952381, Blast_Score=80, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6325290, Length=356, Percent_Identity=24.438202247191, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI24643061, Length=354, Percent_Identity=25.7062146892655, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24643059, Length=373, Percent_Identity=24.6648793565684, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISZ_GLOVI (Q7NHZ4)
Other databases:
- EMBL: BA000045 - RefSeq: NP_925336.1 - ProteinModelPortal: Q7NHZ4 - SMR: Q7NHZ4 - GeneID: 2600791 - GenomeReviews: BA000045_GR - NMPDR: fig|251221.1.peg.2390 - HOGENOM: HBG616575 - OMA: DLRGYHY - ProtClustDB: PRK12292 - BioCyc: GVIO251221:GLR2390-MONOMER - GO: GO:0005737 - HAMAP: MF_00125 - InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004517 - InterPro: IPR004516 - PANTHER: PTHR11476 - PIRSF: PIRSF001549 - TIGRFAMs: TIGR00443
Pfam domain/function: PF00587 tRNA-synt_2b
EC number: 6.1.1.21 [C]
Molecular weight: Translated: 42421; Mature: 42421
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQPPTGVRDLLPLDVSQKLWIEQRLQRVFTRWGYQRIITPTLERMETLQASGSVDLQAI CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHH LQLRDAEGVSLGLRPDPTPSLARAVATRLADAPLPVRLSYQMNVFRSTTQPQEFYQAGVE HHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHH LIGAGGVLADAEVLLVLAECLAELAPPDWTLILGAVAFTRSWLAQVAEPARHRLRRAMAE EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRVAILAEAGIDEAVRSQLLLLFDLRGEPEMVLSKASSLPMSDAQRAELAELETLTGWL HHHHHHHHHCCCCHHHHHCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RGRSVPVVLDLSLVEAFDYYTGLIFEVSAGGRLIGRGGRYDHLLGSYGKPAPGAGFALNL CCCCCCEEEEHHHHHHHHHHHCEEEEECCCCEEEECCCCCHHHHCCCCCCCCCCCEEEEH EALQQVLLPTGKLPGRTVGGGFLVVPDGPDAWEAALAEADKLRCAPGERVEIELLGRTGE HHHHHHHCCCCCCCCCEECCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCH EAIAHGRALGAAVVRWVHPDGSTTDCDLAVIQ HHHHHHHHHHHHHHEEECCCCCCCCCCEEEEC >Mature Secondary Structure MYQPPTGVRDLLPLDVSQKLWIEQRLQRVFTRWGYQRIITPTLERMETLQASGSVDLQAI CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHH LQLRDAEGVSLGLRPDPTPSLARAVATRLADAPLPVRLSYQMNVFRSTTQPQEFYQAGVE HHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHH LIGAGGVLADAEVLLVLAECLAELAPPDWTLILGAVAFTRSWLAQVAEPARHRLRRAMAE EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRVAILAEAGIDEAVRSQLLLLFDLRGEPEMVLSKASSLPMSDAQRAELAELETLTGWL HHHHHHHHHCCCCHHHHHCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RGRSVPVVLDLSLVEAFDYYTGLIFEVSAGGRLIGRGGRYDHLLGSYGKPAPGAGFALNL CCCCCCEEEEHHHHHHHHHHHCEEEEECCCCEEEECCCCCHHHHCCCCCCCCCCCEEEEH EALQQVLLPTGKLPGRTVGGGFLVVPDGPDAWEAALAEADKLRCAPGERVEIELLGRTGE HHHHHHHCCCCCCCCCEECCCEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCH EAIAHGRALGAAVVRWVHPDGSTTDCDLAVIQ HHHHHHHHHHHHHHEEECCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): 8520 [C]
Specific activity: 121.8
Km value (mM): 0.06 {His}} 0.046 {His}} 0.03 {His}} 0.02 {His}} 0.017 {His}} 0.011 {His}} 0.008 {His}} 0.0014 {tRNAHis}} 0.00056 {tRNAHis}} 0.0016 {U73tRNAHisGUG}} 0.00031 {U73tRNAHisGUG}} 0.89 {ATP}} 0.74 {ATP}} 0.655 {ATP}} 0.5
Substrates: ATP; @HIST01.txt*L-histidine!; tRNAHis [C]
Specific reaction: ATP + @HIST01.txt*L-histidine! + tRNAHis = AMP + diphosphate +L-histidyl-tRNAHis [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: 1, 2, 4-Triazole-3-alanine; D-Histidine; Diphosphate; L-Histidinol; Mg2+; N-Acetyl histidine; NEM; p-Chloromercuribenzoate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14621292