| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37521960
Identifier: 37521960
GI number: 37521960
Start: 2552069
End: 2553292
Strand: Direct
Name: 37521960
Synonym: glr2391
Alternate gene names: NA
Gene position: 2552069-2553292 (Clockwise)
Preceding gene: 37521959
Following gene: 37521961
Centisome position: 54.78
GC content: 60.13
Gene sequence:
>1224_bases ATGACTGACCGTCGCTATGATGTCGTACTTTACGGAGCTACCGGCTTCGTCGGCCAACAGACAGCACAGTACTTTACTCG ACACACTCGCCCCGGTGCGGTCCATTGGGCAATCGCGGGCCGGAATCGACAAAAACTCGAATCGCTCAAGGCTCAGCTTG GCACCAATGTGGATGTCCTGATTGCTGACAGCACCGACCAGCCTGCCCTCGATGCCGTCGCAGCCCAGACCCGCGTCATT TTAAACACAGCAGGGCCTTTTGCCCTCTACGGAGACGCCATCGTCGATGCTTGCGTCCGGTTGCGAACGCATTATGTCGA TATCACCGGCGAAACCCCCTGGGTGAGAGATCTTATCGACCGCTATCACGAGCGGGCCGCATCGGAGGGAACTCGGATCA TTCCTTGCTGCGGGTTCGATTCAGTGCCGTCGGATCTGGGCAGTTACCTGATGGTTCGGCACCTGCAACGAGAATGGGGA GTGTCCTGCCGGGCGGTGAAGGCCTATTTTCAGATGTACGGCGGCTTGAACGGCGGCACCCTCGCTTCTGGACTGAATTT GTACGATTCCGGGCGGGCGGCCCGGGTGAGCGATCTCTTTCTGCTGGATCCGCCGGGTGAACATTCCAGCACGGAATTGG AGCGCAATCGGGACCCGGAGGCCCCCGAGTACGATGCCGGTGTGGATACCTGGGTTGGACCGTTCTTCATGGGCCTGGTG AACACCCGCGTCGTGCGCCGCAGCCGTGCCCTCTATGACCAGTGGCAAGAGCCTTACGGTCCGCAATTCGTCTACCAGGA ATATCTCAAGTTCGATCCACCGCTGGCGTGGCTACAGGCCACGGTTGTCACCGTCGGCACGGCCTTGTTTGCAGGAATTA TGCAACAAGCCCCGCTGCGGCCGTTACTGCAATCGCTGCTTCCCGAGCCCGGCAGTGGTCCCTCCGAGCAGACGATGAAC GAGGGTTGGTTCCGCTGTGAACTTTTGGGAGTCGCTGAGGACGGGCGCCGGGTGAAGGGACTGATCTGTGACCAGGGAGA TCCAGGCAACCGCGCCACGGTCAAATTCCTGTGCGAGTCGGCTCTGAGCTTGGTCTTGAACACCGATGAGTTGCCGGGTG GACAACAGCGAGGCGGTGTCCTGACACCTGCAACCGGGCTTGGAGAAGTGCTGGCAGAACGGCTGCGCAGCGCAGGGATG ACCCTGAAGGTTGGTGTCGTTTAG
Upstream 100 bases:
>100_bases CCTTGCGGTCATACAGTGATACCTGCCACCCACAAAACTGAAAAAATACGAACCGACAATCGGTCTAACGCGCTTTTGGT GATGCAGGAAAATAAGTACC
Downstream 100 bases:
>100_bases GGGGCCATCCATTTTGGGGGGTGCCTGCGGTATTCCTACGGCATGGGCAGGATAAGAACCCCAACAATTCGGTAATTCGA CGTCTATCCCGATTGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTDRRYDVVLYGATGFVGQQTAQYFTRHTRPGAVHWAIAGRNRQKLESLKAQLGTNVDVLIADSTDQPALDAVAAQTRVI LNTAGPFALYGDAIVDACVRLRTHYVDITGETPWVRDLIDRYHERAASEGTRIIPCCGFDSVPSDLGSYLMVRHLQREWG VSCRAVKAYFQMYGGLNGGTLASGLNLYDSGRAARVSDLFLLDPPGEHSSTELERNRDPEAPEYDAGVDTWVGPFFMGLV NTRVVRRSRALYDQWQEPYGPQFVYQEYLKFDPPLAWLQATVVTVGTALFAGIMQQAPLRPLLQSLLPEPGSGPSEQTMN EGWFRCELLGVAEDGRRVKGLICDQGDPGNRATVKFLCESALSLVLNTDELPGGQQRGGVLTPATGLGEVLAERLRSAGM TLKVGVV
Sequences:
>Translated_407_residues MTDRRYDVVLYGATGFVGQQTAQYFTRHTRPGAVHWAIAGRNRQKLESLKAQLGTNVDVLIADSTDQPALDAVAAQTRVI LNTAGPFALYGDAIVDACVRLRTHYVDITGETPWVRDLIDRYHERAASEGTRIIPCCGFDSVPSDLGSYLMVRHLQREWG VSCRAVKAYFQMYGGLNGGTLASGLNLYDSGRAARVSDLFLLDPPGEHSSTELERNRDPEAPEYDAGVDTWVGPFFMGLV NTRVVRRSRALYDQWQEPYGPQFVYQEYLKFDPPLAWLQATVVTVGTALFAGIMQQAPLRPLLQSLLPEPGSGPSEQTMN EGWFRCELLGVAEDGRRVKGLICDQGDPGNRATVKFLCESALSLVLNTDELPGGQQRGGVLTPATGLGEVLAERLRSAGM TLKVGVV >Mature_406_residues TDRRYDVVLYGATGFVGQQTAQYFTRHTRPGAVHWAIAGRNRQKLESLKAQLGTNVDVLIADSTDQPALDAVAAQTRVIL NTAGPFALYGDAIVDACVRLRTHYVDITGETPWVRDLIDRYHERAASEGTRIIPCCGFDSVPSDLGSYLMVRHLQREWGV SCRAVKAYFQMYGGLNGGTLASGLNLYDSGRAARVSDLFLLDPPGEHSSTELERNRDPEAPEYDAGVDTWVGPFFMGLVN TRVVRRSRALYDQWQEPYGPQFVYQEYLKFDPPLAWLQATVVTVGTALFAGIMQQAPLRPLLQSLLPEPGSGPSEQTMNE GWFRCELLGVAEDGRRVKGLICDQGDPGNRATVKFLCESALSLVLNTDELPGGQQRGGVLTPATGLGEVLAERLRSAGMT LKVGVV
Specific function: Unknown
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI55770836, Length=443, Percent_Identity=25.5079006772009, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17560066, Length=431, Percent_Identity=26.9141531322506, Blast_Score=137, Evalue=7e-33, Organism=Caenorhabditis elegans, GI32567112, Length=398, Percent_Identity=26.6331658291457, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71991033, Length=420, Percent_Identity=27.3809523809524, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI24644140, Length=447, Percent_Identity=28.6353467561521, Blast_Score=144, Evalue=8e-35, Organism=Drosophila melanogaster, GI24644142, Length=447, Percent_Identity=28.6353467561521, Blast_Score=144, Evalue=8e-35, Organism=Drosophila melanogaster, GI21356081, Length=447, Percent_Identity=28.6353467561521, Blast_Score=144, Evalue=8e-35, Organism=Drosophila melanogaster, GI24646278, Length=453, Percent_Identity=26.4900662251656, Blast_Score=138, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR005097 [H]
Pfam domain/function: PF03435 Saccharop_dh [H]
EC number: NA
Molecular weight: Translated: 44627; Mature: 44496
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRRYDVVLYGATGFVGQQTAQYFTRHTRPGAVHWAIAGRNRQKLESLKAQLGTNVDVL CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEE IADSTDQPALDAVAAQTRVILNTAGPFALYGDAIVDACVRLRTHYVDITGETPWVRDLID EECCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH RYHERAASEGTRIIPCCGFDSVPSDLGSYLMVRHLQREWGVSCRAVKAYFQMYGGLNGGT HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH LASGLNLYDSGRAARVSDLFLLDPPGEHSSTELERNRDPEAPEYDAGVDTWVGPFFMGLV HHCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH NTRVVRRSRALYDQWQEPYGPQFVYQEYLKFDPPLAWLQATVVTVGTALFAGIMQQAPLR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH PLLQSLLPEPGSGPSEQTMNEGWFRCELLGVAEDGRRVKGLICDQGDPGNRATVKFLCES HHHHHHCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHH ALSLVLNTDELPGGQQRGGVLTPATGLGEVLAERLRSAGMTLKVGVV HHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCEEEEECC >Mature Secondary Structure TDRRYDVVLYGATGFVGQQTAQYFTRHTRPGAVHWAIAGRNRQKLESLKAQLGTNVDVL CCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEE IADSTDQPALDAVAAQTRVILNTAGPFALYGDAIVDACVRLRTHYVDITGETPWVRDLID EECCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH RYHERAASEGTRIIPCCGFDSVPSDLGSYLMVRHLQREWGVSCRAVKAYFQMYGGLNGGT HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH LASGLNLYDSGRAARVSDLFLLDPPGEHSSTELERNRDPEAPEYDAGVDTWVGPFFMGLV HHCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH NTRVVRRSRALYDQWQEPYGPQFVYQEYLKFDPPLAWLQATVVTVGTALFAGIMQQAPLR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH PLLQSLLPEPGSGPSEQTMNEGWFRCELLGVAEDGRRVKGLICDQGDPGNRATVKFLCES HHHHHHCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHH ALSLVLNTDELPGGQQRGGVLTPATGLGEVLAERLRSAGMTLKVGVV HHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]