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The map label for this gene is yclF [H]

Identifier: 37521831

GI number: 37521831

Start: 2425171

End: 2426580

Strand: Reverse

Name: yclF [H]

Synonym: gll2262

Alternate gene names: 37521831

Gene position: 2426580-2425171 (Counterclockwise)

Preceding gene: 37521832

Following gene: 37521829

Centisome position: 52.08

GC content: 62.27

Gene sequence:

>1410_bases
ATGAGCAATTTCCAAGCCGAAATCCCCCTCACCGCCGGTCCGGCCTCTTCAAGGACGTTTTTCGGCCATCCGGTCGGTTT
ATATGTGCTGTTTTTCACCGAGATGTGGGAGCGCTTCTCGTACTACGGGATGCGCGCCCTGCTGGTGCTGTACATGATCA
ACTATCTCGAGAAGCCGGGGGTCGCAGCCGGTGTGCTGGGCTACGGCGCGGTGCGCGGTGCGCTGGAGGGGGTATTCGGG
CCGCTCGCCGCCCAGGCGTTCGCCTCGCAAATTTACGGCATCTACACGGCGCTGGTGTACCTGACGCCCCTGTTGGGCGG
CTACCTGGCCGATCAGGTCTGGGGACAGCGCCGCACGGTGGTGATTGGCGGCGTGCTGATGGCGATGGGCCACTTTTTGA
TGGCCTTCGAGAGTTTGTTCTTCCCGGCCCTGGGGCTGATCATCCTCGGTAACGGCGCTTTTAAGCCGAATATTTCCACC
CAGGTGGGCGGGCTGTACCCGCCGGGTGACCCGCGCCGCGACCAGGCCTTCAGCATTTTTTACGTCGGCATTAACCTGGG
GGCGTTCGCAGCGCCGCTGGTGTGCGGCACCCTGGGCGAGACGGTGGGTTGGCACTACGGATTTAGCGCCGCAGGCGTCG
GCATGGTGATTGGACTGATGGTTTACCTGTTCGGTCAGCGCTATCTGGCGCCGGACCAGCTCGCCCAGACCCGCGCCAAC
CACACCGAGAAAATCCCCCTCGATTCCACCGAACGCAGCGGCATCCTGGCGCTGGTAGCCCTGTGCGTCATCAACGTCTT
CTGGTGGGCGGCCTACGAGCAAAGCGGCAACACGATCGCCTTTTGGGCGGACAAATTTACCAACCGCGAGCTGTTCGGCA
ACGGTTGGGTGTTTCCGGCCACCTGGGTGCAGTCCATCAACCCGTTTTTGATCTTCACCCTGACCCCGGTGATCGTCGGC
CTGTGGGCCTGGCAGGCCGGCCGCGGCAAAGAACTTTCGACCATCGCCAAGATGGTCTTCAGCTGCATGCTCCTCGGGCT
GGCCTTTCTGGTGATGGTGGGCGGGGCGCGCGAGTACGCCCAGACCGGCACGACCAGCATCTGGTGGCTGCTTGCTTTTT
TTACGCTGCTGACGGTGTCGGAGTTGTACCTTTCGCCCATCGGTCTGTCGCTGGTGACCAAGGTCGCCCCGGCGCGGATG
GTCTCGCTGCTGATGGGCATGTGGTTTTTGGCGATTTTCGCGGGCAACTACCTGGGCGGCTTTCTGGGGACTTACATCGA
GCGCATACCCAAGGAGACGTTCTTCCTGGGTATGGCCTGTATGTGCTTTGCCGCGGGCGGGGCGATGTGGCTGCTGAGCG
GCCCGGTCAAAAAGGCCGTGGGCGCTTCGATTGCCCAGAAAAAAGCCTGA

Upstream 100 bases:

>100_bases
GATTGCGAGTATGGTAGGAAATTGAAAAATCGCTGGCCCCCCACAGCAATGCGGCGGGCGCCCCCGGCCCACTTCTTGCC
GCTTTCAATCCGGTTAACCC

Downstream 100 bases:

>100_bases
CGGCAGACATTCAGCGCGGGCCGCGCACCTGCCAGCGGGCGTCGGCGACGAGCGGCAGGGATTGGCGGGAGAGAAACACT
GTTCCGTTCATCAGCCAGAC

Product: peptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSNFQAEIPLTAGPASSRTFFGHPVGLYVLFFTEMWERFSYYGMRALLVLYMINYLEKPGVAAGVLGYGAVRGALEGVFG
PLAAQAFASQIYGIYTALVYLTPLLGGYLADQVWGQRRTVVIGGVLMAMGHFLMAFESLFFPALGLIILGNGAFKPNIST
QVGGLYPPGDPRRDQAFSIFYVGINLGAFAAPLVCGTLGETVGWHYGFSAAGVGMVIGLMVYLFGQRYLAPDQLAQTRAN
HTEKIPLDSTERSGILALVALCVINVFWWAAYEQSGNTIAFWADKFTNRELFGNGWVFPATWVQSINPFLIFTLTPVIVG
LWAWQAGRGKELSTIAKMVFSCMLLGLAFLVMVGGAREYAQTGTTSIWWLLAFFTLLTVSELYLSPIGLSLVTKVAPARM
VSLLMGMWFLAIFAGNYLGGFLGTYIERIPKETFFLGMACMCFAAGGAMWLLSGPVKKAVGASIAQKKA

Sequences:

>Translated_469_residues
MSNFQAEIPLTAGPASSRTFFGHPVGLYVLFFTEMWERFSYYGMRALLVLYMINYLEKPGVAAGVLGYGAVRGALEGVFG
PLAAQAFASQIYGIYTALVYLTPLLGGYLADQVWGQRRTVVIGGVLMAMGHFLMAFESLFFPALGLIILGNGAFKPNIST
QVGGLYPPGDPRRDQAFSIFYVGINLGAFAAPLVCGTLGETVGWHYGFSAAGVGMVIGLMVYLFGQRYLAPDQLAQTRAN
HTEKIPLDSTERSGILALVALCVINVFWWAAYEQSGNTIAFWADKFTNRELFGNGWVFPATWVQSINPFLIFTLTPVIVG
LWAWQAGRGKELSTIAKMVFSCMLLGLAFLVMVGGAREYAQTGTTSIWWLLAFFTLLTVSELYLSPIGLSLVTKVAPARM
VSLLMGMWFLAIFAGNYLGGFLGTYIERIPKETFFLGMACMCFAAGGAMWLLSGPVKKAVGASIAQKKA
>Mature_468_residues
SNFQAEIPLTAGPASSRTFFGHPVGLYVLFFTEMWERFSYYGMRALLVLYMINYLEKPGVAAGVLGYGAVRGALEGVFGP
LAAQAFASQIYGIYTALVYLTPLLGGYLADQVWGQRRTVVIGGVLMAMGHFLMAFESLFFPALGLIILGNGAFKPNISTQ
VGGLYPPGDPRRDQAFSIFYVGINLGAFAAPLVCGTLGETVGWHYGFSAAGVGMVIGLMVYLFGQRYLAPDQLAQTRANH
TEKIPLDSTERSGILALVALCVINVFWWAAYEQSGNTIAFWADKFTNRELFGNGWVFPATWVQSINPFLIFTLTPVIVGL
WAWQAGRGKELSTIAKMVFSCMLLGLAFLVMVGGAREYAQTGTTSIWWLLAFFTLLTVSELYLSPIGLSLVTKVAPARMV
SLLMGMWFLAIFAGNYLGGFLGTYIERIPKETFFLGMACMCFAAGGAMWLLSGPVKKAVGASIAQKKA

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Escherichia coli, GI1790572, Length=452, Percent_Identity=28.7610619469027, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786927, Length=456, Percent_Identity=26.7543859649123, Blast_Score=185, Evalue=5e-48,
Organism=Escherichia coli, GI1789911, Length=453, Percent_Identity=26.2693156732892, Blast_Score=177, Evalue=2e-45,
Organism=Escherichia coli, GI1787922, Length=455, Percent_Identity=24.1758241758242, Blast_Score=157, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71987453, Length=384, Percent_Identity=24.4791666666667, Blast_Score=95, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6322946, Length=501, Percent_Identity=23.9520958083832, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28571102, Length=294, Percent_Identity=24.4897959183673, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571100, Length=294, Percent_Identity=24.4897959183673, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571098, Length=294, Percent_Identity=24.4897959183673, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24639583, Length=358, Percent_Identity=21.7877094972067, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24639585, Length=345, Percent_Identity=22.0289855072464, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24639581, Length=345, Percent_Identity=22.0289855072464, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 50959; Mature: 50827

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50850 MFS ; PS01022 PTR2_1 ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFQAEIPLTAGPASSRTFFGHPVGLYVLFFTEMWERFSYYGMRALLVLYMINYLEKPG
CCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VAAGVLGYGAVRGALEGVFGPLAAQAFASQIYGIYTALVYLTPLLGGYLADQVWGQRRTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VIGGVLMAMGHFLMAFESLFFPALGLIILGNGAFKPNISTQVGGLYPPGDPRRDQAFSIF
EHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
YVGINLGAFAAPLVCGTLGETVGWHYGFSAAGVGMVIGLMVYLFGQRYLAPDQLAQTRAN
EEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
HTEKIPLDSTERSGILALVALCVINVFWWAAYEQSGNTIAFWADKFTNRELFGNGWVFPA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCCCCCHH
TWVQSINPFLIFTLTPVIVGLWAWQAGRGKELSTIAKMVFSCMLLGLAFLVMVGGAREYA
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QTGTTSIWWLLAFFTLLTVSELYLSPIGLSLVTKVAPARMVSLLMGMWFLAIFAGNYLGG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGTYIERIPKETFFLGMACMCFAAGGAMWLLSGPVKKAVGASIAQKKA
HHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNFQAEIPLTAGPASSRTFFGHPVGLYVLFFTEMWERFSYYGMRALLVLYMINYLEKPG
CCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VAAGVLGYGAVRGALEGVFGPLAAQAFASQIYGIYTALVYLTPLLGGYLADQVWGQRRTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VIGGVLMAMGHFLMAFESLFFPALGLIILGNGAFKPNISTQVGGLYPPGDPRRDQAFSIF
EHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
YVGINLGAFAAPLVCGTLGETVGWHYGFSAAGVGMVIGLMVYLFGQRYLAPDQLAQTRAN
EEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
HTEKIPLDSTERSGILALVALCVINVFWWAAYEQSGNTIAFWADKFTNRELFGNGWVFPA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCCCCCHH
TWVQSINPFLIFTLTPVIVGLWAWQAGRGKELSTIAKMVFSCMLLGLAFLVMVGGAREYA
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QTGTTSIWWLLAFFTLLTVSELYLSPIGLSLVTKVAPARMVSLLMGMWFLAIFAGNYLGG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGTYIERIPKETFFLGMACMCFAAGGAMWLLSGPVKKAVGASIAQKKA
HHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]