Click here to switch to the map view.

The map label for this gene is yliI [H]

Identifier: 37521830

GI number: 37521830

Start: 2423295

End: 2425160

Strand: Direct

Name: yliI [H]

Synonym: glr2261

Alternate gene names: 37521830

Gene position: 2423295-2425160 (Clockwise)

Preceding gene: 37521827

Following gene: 37521835

Centisome position: 52.01

GC content: 63.67

Gene sequence:

>1866_bases
ATGGACATCAACCACCGCATAGCGTCGATTCAGCTTGGCAGTGCCTGTGCTCTGATACTGCTCGGCGGTTCGCCCGCCCT
TGCCCAGATCCCGGCCGGTTTTCAGCAAAGCCTGGTAAGCAGCGGTCTTGACGGCCCAACAGCGATGGAATTTGCCCCCG
ACGGCCGGCTGTTCGTCTGTGAAAAAGGGGGTGCCCTACGGGTGGCGGCGAACGGCAGCCTGCTGCAGGAGCCATTTTTA
ACCGTGGACGCTGCCACTGAGAGCGAGCGGGGACTGTTGGGGATTGCCTTCGATCCCGCCTTTGCCTCCAACCGGTACCT
TTACGTCTACTACACCCGCGCGGCGGAGCCGATCAAAAACCGGATCAGCCGATTCACCGCCAGCGTTGCCAATCCGAACG
TGGCCGAGCCGGGCAGCGAACTGGTCATCCTTGACAACATCGCCTCCGACGCCGGCAACCACAACGGCGGGGCCATCCAC
TTCGGGACCGACGGCAAACTGTACGCGGGCGTGGGCGACGGCGGGGCCAGTTCCAGCAACTCCCAATCGCTCTCGAACCT
CTCGGGCAAACTGCTGCGCGTCGATCCGGGCGCTTACCCGAACATCGTCCCGCCGGACAACCCCTTCGTGGGCACCAGTG
GGGCACGCGGTGAAATCTGGGCTCTGGGGCTGCGCAACCCGTTTACCTTCGCTGTCCAGCCGGGCACGGGCACCATCTTC
ATCAACGACGTCGGTTCAAACGCCTGGGAGGAAGTCAACCGTGCGGCCAAAGGCGGCAATTACGGCTGGCCCGCAGTGGA
AGGGAACGCGGATGATCCCGATTTTATCGATCCCGTCTACAGCTACCCACGCGGCAGCAGCGCCTCGATCGCCGGCGGGG
CATTCTATCAGGCCACCCAGTTTCCGGGGGCCTACACCGGCAACTACTTTTTTGCCGATTACATCCAGGGCTTCCTCCGC
CGTTTGCTACCCGCCGACTACACCCAGGTGCGCGAGTTCGCCGGGGGGCTAGACGGCGTGGTCGATCTCAAAGTCGGCCC
CGACGGGCAGTTGTACTGGCTGTCGATCAATAGCGGCGAGGTGTACAAAATCGGCGCGCTGCCCATCCGGGGCGATTTCA
ACGCTGATCGCACCTCTGAAATTCTCTGGCGGTTACCTGAGACGGGGGCCAATCTTCTCTGGCTGATGAGCGGCACCACC
CAGACCGGCGTCGCCTATCTGCCGGCGGTGGCTGATCCCAACTGGCAGATCGGGGGCACGGGCGATTTTGACGGCGACGG
CAAGACCGATATACTTTGGCGCAACAGCGCGACCGGCGCCAATACCCTCTGGCGGATGAACGGCACGGTGTTTGCAGGAA
GTGTTTCCCTGCCGCCGATGGGCGACAGGAACTGGAGCATCGTCGGCAGCGGCGATTTTAGTGGCGACGGCAAGAGTGAT
ATTCTCTGGCGCAATGCACTCAGCGGGGCCAACAGTGTCTGGACGATGAACGGCACAGTCTACACCGGTGCGGTCGCGCT
GCCGGCGGTGGCCGGTCCCGACTGGCAGGTGGTGGGGACCGGCCACTTCGACGGCGGCGGCAAACTGGACATCGTCTGGC
GCAACCGGGCCACCGGCGCCAATACCGTCTGGCTCATGAACGGCACCACTTTTGCCAAATCGCTTTCCCTACCGAGCGTC
GGGGATACCCGCTGGGAAATAGGCGGGGTAGGCGATTACAACAACGACGCCGCCCCCGACCTGGTCTGGCGCAACATCGC
CACCGGCGAGAATGCCGTCTGGCTGATGAACGGAACAGTGTTTCTCTCCCGCCAATCCCTGCCGCTCGTCGCCGACGCCC
GCTGGCAGGTGCGCGGCCCGCGCTGA

Upstream 100 bases:

>100_bases
CGGCTCCACGCTCAATCTGAAGGCTGATGGAAAAGCCCGCCGCGTTCTGCACCGTAGTGGCAAGCCCCGGATTTCCCTCC
CACCGGCAACAGCAACAACC

Downstream 100 bases:

>100_bases
ATGTCTGCCGTCAGGCTTTTTTCTGGGCAATCGAAGCGCCCACGGCCTTTTTGACCGGGCCGCTCAGCAGCCACATCGCC
CCGCCCGCGGCAAAGCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MDINHRIASIQLGSACALILLGGSPALAQIPAGFQQSLVSSGLDGPTAMEFAPDGRLFVCEKGGALRVAANGSLLQEPFL
TVDAATESERGLLGIAFDPAFASNRYLYVYYTRAAEPIKNRISRFTASVANPNVAEPGSELVILDNIASDAGNHNGGAIH
FGTDGKLYAGVGDGGASSSNSQSLSNLSGKLLRVDPGAYPNIVPPDNPFVGTSGARGEIWALGLRNPFTFAVQPGTGTIF
INDVGSNAWEEVNRAAKGGNYGWPAVEGNADDPDFIDPVYSYPRGSSASIAGGAFYQATQFPGAYTGNYFFADYIQGFLR
RLLPADYTQVREFAGGLDGVVDLKVGPDGQLYWLSINSGEVYKIGALPIRGDFNADRTSEILWRLPETGANLLWLMSGTT
QTGVAYLPAVADPNWQIGGTGDFDGDGKTDILWRNSATGANTLWRMNGTVFAGSVSLPPMGDRNWSIVGSGDFSGDGKSD
ILWRNALSGANSVWTMNGTVYTGAVALPAVAGPDWQVVGTGHFDGGGKLDIVWRNRATGANTVWLMNGTTFAKSLSLPSV
GDTRWEIGGVGDYNNDAAPDLVWRNIATGENAVWLMNGTVFLSRQSLPLVADARWQVRGPR

Sequences:

>Translated_621_residues
MDINHRIASIQLGSACALILLGGSPALAQIPAGFQQSLVSSGLDGPTAMEFAPDGRLFVCEKGGALRVAANGSLLQEPFL
TVDAATESERGLLGIAFDPAFASNRYLYVYYTRAAEPIKNRISRFTASVANPNVAEPGSELVILDNIASDAGNHNGGAIH
FGTDGKLYAGVGDGGASSSNSQSLSNLSGKLLRVDPGAYPNIVPPDNPFVGTSGARGEIWALGLRNPFTFAVQPGTGTIF
INDVGSNAWEEVNRAAKGGNYGWPAVEGNADDPDFIDPVYSYPRGSSASIAGGAFYQATQFPGAYTGNYFFADYIQGFLR
RLLPADYTQVREFAGGLDGVVDLKVGPDGQLYWLSINSGEVYKIGALPIRGDFNADRTSEILWRLPETGANLLWLMSGTT
QTGVAYLPAVADPNWQIGGTGDFDGDGKTDILWRNSATGANTLWRMNGTVFAGSVSLPPMGDRNWSIVGSGDFSGDGKSD
ILWRNALSGANSVWTMNGTVYTGAVALPAVAGPDWQVVGTGHFDGGGKLDIVWRNRATGANTVWLMNGTTFAKSLSLPSV
GDTRWEIGGVGDYNNDAAPDLVWRNIATGENAVWLMNGTVFLSRQSLPLVADARWQVRGPR
>Mature_621_residues
MDINHRIASIQLGSACALILLGGSPALAQIPAGFQQSLVSSGLDGPTAMEFAPDGRLFVCEKGGALRVAANGSLLQEPFL
TVDAATESERGLLGIAFDPAFASNRYLYVYYTRAAEPIKNRISRFTASVANPNVAEPGSELVILDNIASDAGNHNGGAIH
FGTDGKLYAGVGDGGASSSNSQSLSNLSGKLLRVDPGAYPNIVPPDNPFVGTSGARGEIWALGLRNPFTFAVQPGTGTIF
INDVGSNAWEEVNRAAKGGNYGWPAVEGNADDPDFIDPVYSYPRGSSASIAGGAFYQATQFPGAYTGNYFFADYIQGFLR
RLLPADYTQVREFAGGLDGVVDLKVGPDGQLYWLSINSGEVYKIGALPIRGDFNADRTSEILWRLPETGANLLWLMSGTT
QTGVAYLPAVADPNWQIGGTGDFDGDGKTDILWRNSATGANTLWRMNGTVFAGSVSLPPMGDRNWSIVGSGDFSGDGKSD
ILWRNALSGANSVWTMNGTVYTGAVALPAVAGPDWQVVGTGHFDGGGKLDIVWRNRATGANTVWLMNGTTFAKSLSLPSV
GDTRWEIGGVGDYNNDAAPDLVWRNIATGENAVWLMNGTVFLSRQSLPLVADARWQVRGPR

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936955, Length=389, Percent_Identity=35.73264781491, Blast_Score=184, Evalue=3e-46,
Organism=Homo sapiens, GI187936953, Length=389, Percent_Identity=35.73264781491, Blast_Score=184, Evalue=3e-46,
Organism=Homo sapiens, GI124248546, Length=340, Percent_Identity=40, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI20143973, Length=312, Percent_Identity=29.4871794871795, Blast_Score=99, Evalue=9e-21,
Organism=Escherichia coli, GI1787060, Length=364, Percent_Identity=28.5714285714286, Blast_Score=126, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 65704; Mature: 65704

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINHRIASIQLGSACALILLGGSPALAQIPAGFQQSLVSSGLDGPTAMEFAPDGRLFVC
CCCCCEEEEEEECCEEEEEEECCCCCHHHCCCHHHHHHHHCCCCCCEEEEECCCCCEEEE
EKGGALRVAANGSLLQEPFLTVDAATESERGLLGIAFDPAFASNRYLYVYYTRAAEPIKN
CCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHH
RISRFTASVANPNVAEPGSELVILDNIASDAGNHNGGAIHFGTDGKLYAGVGDGGASSSN
HHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC
SQSLSNLSGKLLRVDPGAYPNIVPPDNPFVGTSGARGEIWALGLRNPFTFAVQPGTGTIF
CHHHHHCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCEEEEEECCCCEEE
INDVGSNAWEEVNRAAKGGNYGWPAVEGNADDPDFIDPVYSYPRGSSASIAGGAFYQATQ
EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEC
FPGAYTGNYFFADYIQGFLRRLLPADYTQVREFAGGLDGVVDLKVGPDGQLYWLSINSGE
CCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCC
VYKIGALPIRGDFNADRTSEILWRLPETGANLLWLMSGTTQTGVAYLPAVADPNWQIGGT
EEEEEEEEECCCCCCCCCHHHHEECCCCCCCEEEEEECCCCCCEEEEEEECCCCEECCCC
GDFDGDGKTDILWRNSATGANTLWRMNGTVFAGSVSLPPMGDRNWSIVGSGDFSGDGKSD
CCCCCCCCEEEEEECCCCCCCEEEEECCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCC
ILWRNALSGANSVWTMNGTVYTGAVALPAVAGPDWQVVGTGHFDGGGKLDIVWRNRATGA
EEEEHHCCCCCEEEEECCEEEECCEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCC
NTVWLMNGTTFAKSLSLPSVGDTRWEIGGVGDYNNDAAPDLVWRNIATGENAVWLMNGTV
CEEEEECCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHEEECCCCCCEEEEEECEE
FLSRQSLPLVADARWQVRGPR
EEECCCCCEEECCEEEECCCC
>Mature Secondary Structure
MDINHRIASIQLGSACALILLGGSPALAQIPAGFQQSLVSSGLDGPTAMEFAPDGRLFVC
CCCCCEEEEEEECCEEEEEEECCCCCHHHCCCHHHHHHHHCCCCCCEEEEECCCCCEEEE
EKGGALRVAANGSLLQEPFLTVDAATESERGLLGIAFDPAFASNRYLYVYYTRAAEPIKN
CCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHH
RISRFTASVANPNVAEPGSELVILDNIASDAGNHNGGAIHFGTDGKLYAGVGDGGASSSN
HHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC
SQSLSNLSGKLLRVDPGAYPNIVPPDNPFVGTSGARGEIWALGLRNPFTFAVQPGTGTIF
CHHHHHCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCEEEEEECCCCEEE
INDVGSNAWEEVNRAAKGGNYGWPAVEGNADDPDFIDPVYSYPRGSSASIAGGAFYQATQ
EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEC
FPGAYTGNYFFADYIQGFLRRLLPADYTQVREFAGGLDGVVDLKVGPDGQLYWLSINSGE
CCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCC
VYKIGALPIRGDFNADRTSEILWRLPETGANLLWLMSGTTQTGVAYLPAVADPNWQIGGT
EEEEEEEEECCCCCCCCCHHHHEECCCCCCCEEEEEECCCCCCEEEEEEECCCCEECCCC
GDFDGDGKTDILWRNSATGANTLWRMNGTVFAGSVSLPPMGDRNWSIVGSGDFSGDGKSD
CCCCCCCCEEEEEECCCCCCCEEEEECCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCC
ILWRNALSGANSVWTMNGTVYTGAVALPAVAGPDWQVVGTGHFDGGGKLDIVWRNRATGA
EEEEHHCCCCCEEEEECCEEEECCEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCC
NTVWLMNGTTFAKSLSLPSVGDTRWEIGGVGDYNNDAAPDLVWRNIATGENAVWLMNGTV
CEEEEECCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHEEECCCCCCEEEEEECEE
FLSRQSLPLVADARWQVRGPR
EEECCCCCEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]