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The map label for this gene is sodC2 [H]

Identifier: 37521739

GI number: 37521739

Start: 2319719

End: 2320294

Strand: Direct

Name: sodC2 [H]

Synonym: glr2170

Alternate gene names: 37521739

Gene position: 2319719-2320294 (Clockwise)

Preceding gene: 37521737

Following gene: 37521740

Centisome position: 49.79

GC content: 57.29

Gene sequence:

>576_bases
ATGCAAAAAATGGTTCACAACGCGCTCGTCGACAGGCCCGGGACACGATGGCAAGGTTTTGCCGTCTTTGCCGGGATTTT
CGGATTACTTTGCTTGCTTTTGATGGCCGTTCCGGCTATCGACGCCGATCGGTGGCTACAGGCCAAAATCGAGCTAAAAA
ATGCTGATGGCCTCCCTGTAGGCAATGCGTCATTGACCCAGCTGAGCGATGGGGTGCGGGTATCGGTCCAAGTGCAGGGC
TTGCTGCCCGGCAAATACCCGATTCACTTTCACTCGAAGGGAAAATGCGTTGCACCGGATTTCAGGTCTTCGCGGGGTGT
ATTTGACACCCACTCCCTTGGACACAAAACCCGTCCGGACGGCCAACCCGTTCCTCCCGCCGGTTTGCTGCCTGCTCTGA
TAGTTGGAGCGGCCGGTACCGGCGAGTTGAACGCCCTGAATACGGACGTGACCCTGCGGGCCCACAAGTTGCATTCTTTG
CTCAGACCCGGAGGTTCTGCACTGGTCATCCATGCAGCGCACTCCAGACAGATCATCGCCTGCGGAGCGGTCACCAGAAC
ACCCGTTTCCGATTGA

Upstream 100 bases:

>100_bases
GGGCAGCGAGCAACCAGTTCATTTTTCTTTCATAAGTTCAGTTCACTAAATACGGTAAACGACATTGCCGGGGTAAGCCG
TTTGCTTTCGGGGTTTACGT

Downstream 100 bases:

>100_bases
ACCCCACCTTCCTGTTTGCCCTTTCTTTTTGTGAGGTACCCCCATGCCGAAGTTTAAAGCGACGCGCCTGCTACGCCGCC
GTCAGTTGTTGAAACTGGCC

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MQKMVHNALVDRPGTRWQGFAVFAGIFGLLCLLLMAVPAIDADRWLQAKIELKNADGLPVGNASLTQLSDGVRVSVQVQG
LLPGKYPIHFHSKGKCVAPDFRSSRGVFDTHSLGHKTRPDGQPVPPAGLLPALIVGAAGTGELNALNTDVTLRAHKLHSL
LRPGGSALVIHAAHSRQIIACGAVTRTPVSD

Sequences:

>Translated_191_residues
MQKMVHNALVDRPGTRWQGFAVFAGIFGLLCLLLMAVPAIDADRWLQAKIELKNADGLPVGNASLTQLSDGVRVSVQVQG
LLPGKYPIHFHSKGKCVAPDFRSSRGVFDTHSLGHKTRPDGQPVPPAGLLPALIVGAAGTGELNALNTDVTLRAHKLHSL
LRPGGSALVIHAAHSRQIIACGAVTRTPVSD
>Mature_191_residues
MQKMVHNALVDRPGTRWQGFAVFAGIFGLLCLLLMAVPAIDADRWLQAKIELKNADGLPVGNASLTQLSDGVRVSVQVQG
LLPGKYPIHFHSKGKCVAPDFRSSRGVFDTHSLGHKTRPDGQPVPPAGLLPALIVGAAGTGELNALNTDVTLRAHKLHSL
LRPGGSALVIHAAHSRQIIACGAVTRTPVSD

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 20193; Mature: 20193

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKMVHNALVDRPGTRWQGFAVFAGIFGLLCLLLMAVPAIDADRWLQAKIELKNADGLPV
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCC
GNASLTQLSDGVRVSVQVQGLLPGKYPIHFHSKGKCVAPDFRSSRGVFDTHSLGHKTRPD
CCCHHHHCCCCEEEEEEEEEECCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCC
GQPVPPAGLLPALIVGAAGTGELNALNTDVTLRAHKLHSLLRPGGSALVIHAAHSRQIIA
CCCCCCCHHHHHHHHCCCCCCCCEEECCCEEEHHHHHHHHHCCCCCEEEEEECCCCEEEE
CGAVTRTPVSD
ECCCCCCCCCC
>Mature Secondary Structure
MQKMVHNALVDRPGTRWQGFAVFAGIFGLLCLLLMAVPAIDADRWLQAKIELKNADGLPV
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCC
GNASLTQLSDGVRVSVQVQGLLPGKYPIHFHSKGKCVAPDFRSSRGVFDTHSLGHKTRPD
CCCHHHHCCCCEEEEEEEEEECCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCC
GQPVPPAGLLPALIVGAAGTGELNALNTDVTLRAHKLHSLLRPGGSALVIHAAHSRQIIA
CCCCCCCHHHHHHHHCCCCCCCCEEECCCEEEHHHHHHHHHCCCCCEEEEEECCCCEEEE
CGAVTRTPVSD
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]