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The map label for this gene is yxkH [H]

Identifier: 37521692

GI number: 37521692

Start: 2277625

End: 2279181

Strand: Reverse

Name: yxkH [H]

Synonym: gll2123

Alternate gene names: 37521692

Gene position: 2279181-2277625 (Counterclockwise)

Preceding gene: 37521694

Following gene: 37521691

Centisome position: 48.92

GC content: 64.8

Gene sequence:

>1557_bases
GTGACAGCCGGGATCGCCGCCGTCTTTTTCTTGCCCCGTTCCGCTCCCCCGCCCCAGACGAGCGTGGCCACGCCTTTGCC
TCCTGCTGTGGGGGCTGCCGAGTTACCCAGCGCCCCGAGCGGACCGGAGGATATCGCCCGTTCCGCCCGCCTTGCCCGGG
TGCCGGCCATCATGTACCACGACATCGTGCGGCGCAAAGACGTCTGGTTCGACACAACGGTAGAAGAGTTTCGAGCCCAA
CTCGAAGCCATCCGCGCGGCTGGGGCTACGCCCATCACTATTGACCAGTTCCACGAGCACCTCAAAAACGGTGCCCCCCT
GCCGGTCAAACCGATCTTGCTCACCTTCGACGACGGCTATCTGGGCCATCTCGAAAACGCCTACCCGCTGCTCAAAGAAT
TCAACTACCCGGCGGTGTTCTTTGTGCACACCGCCTACGTCGGCGCGCTGACGGGCAAGCCCCACATGAACTGGGAGCAA
ATCAAACAAATCGATTCCGAAGGGCTCGTCTCGATCCAGTCGCACACGATCACCCATCCGGCGGATCTGCGTACCCTCGA
CGACGCGGCTCTGGAGCGCGAACTGGTCGAATCAAAGCGGATTCTCGAAGAGAAGCTCGGCCACCCTGTCCACTACCTCG
CCTACCCGGTGGGCAACCAGGACGAGCGGGTGCGCCAGGGTGCCATCGATGCAGGCTACCGGCTTTCCTTCACAATGGAT
CTGGGCTACACGGGCCAATCCGGCAGCCTGCTCGCCTTGCAGCGGTTCATCGATTCGCGCCTGCCGCTGGCCTTGGCGGG
GGTCGGGGCCGTGGCCGATACCCGCGTCAACATGGAAGCCCCGGTGACCCTTCACGAGCAGACCCACCGGCGGGTGCGGC
TGGTGTGGCTTTCCGGGGGCAATTACACCACCCGCCACTCCGAGGGCAACCGCTACCCGGTGGGCGATTTTATCGAGCGC
GAGCGGGCGGTGGGCGGCATCAACGGCGGCTTTTTTGCCTTCGCGGGCCTGCGGGCGACCAATTCCGACATGGTCGGGCC
GTACCTGTCCCAGAACGAGGGGCGCTTTATGCCCGGTGCCCCCGAATTCGACAAGTCCCTGCGGGGCCGACCGGTGGTGC
TGATCAGCGCGACGGGCCTGCGCTTCGTGCCCTACAGCCCCGAGACCTTTGACACCGAAGCGGAGGCGCGCGCCTACTTA
AGCGACCTGTCCGACCTGTTTGTCGCGGGGGTCTGGCTGGTCAACAACGGACAGGCCCTCACCACCGAGCAAATCGAGCA
ATTCCGGCTTTCCAACCATTCCGAATTTCGCCGCCGCACATTCATGGGCATCGACAAGGCCGGTCTGCCGATGGTGGGTG
CCACCCTCACCAACGTCAATGCCACCCAACTGGCCCGCGCCCTCGAAGAGGCGGGCCTGCGCGAGGCGGTGCTGCTCGAC
TCGGGCTTTTCGACGTCGCTGGTCCACCAGGGCAAGGTGCTGGTCACCGGCCACACCGCTCCCAGTATCCCCAGCCGGAT
CATTCCCCACGCCGTGCTCGTCCATCCCCCCCTTTAG

Upstream 100 bases:

>100_bases
TTGGAGAGGGGATACCGCCTTGCAACGCGCCCAAGCCAAGTCTGCTCCCAGGCCCAATCAAAACCTCAGGCGTCTGCTGG
CGATCGGGGCCGCCGTTGGA

Downstream 100 bases:

>100_bases
AATGTTTATCGCGTTCGTTTATTGCCAAACACCCATTCGTCTTTGTGTGCTATTTATCTTGGGGGGAACCCACGGCGATC
GGTGATTTTTTATCAACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MTAGIAAVFFLPRSAPPPQTSVATPLPPAVGAAELPSAPSGPEDIARSARLARVPAIMYHDIVRRKDVWFDTTVEEFRAQ
LEAIRAAGATPITIDQFHEHLKNGAPLPVKPILLTFDDGYLGHLENAYPLLKEFNYPAVFFVHTAYVGALTGKPHMNWEQ
IKQIDSEGLVSIQSHTITHPADLRTLDDAALERELVESKRILEEKLGHPVHYLAYPVGNQDERVRQGAIDAGYRLSFTMD
LGYTGQSGSLLALQRFIDSRLPLALAGVGAVADTRVNMEAPVTLHEQTHRRVRLVWLSGGNYTTRHSEGNRYPVGDFIER
ERAVGGINGGFFAFAGLRATNSDMVGPYLSQNEGRFMPGAPEFDKSLRGRPVVLISATGLRFVPYSPETFDTEAEARAYL
SDLSDLFVAGVWLVNNGQALTTEQIEQFRLSNHSEFRRRTFMGIDKAGLPMVGATLTNVNATQLARALEEAGLREAVLLD
SGFSTSLVHQGKVLVTGHTAPSIPSRIIPHAVLVHPPL

Sequences:

>Translated_518_residues
MTAGIAAVFFLPRSAPPPQTSVATPLPPAVGAAELPSAPSGPEDIARSARLARVPAIMYHDIVRRKDVWFDTTVEEFRAQ
LEAIRAAGATPITIDQFHEHLKNGAPLPVKPILLTFDDGYLGHLENAYPLLKEFNYPAVFFVHTAYVGALTGKPHMNWEQ
IKQIDSEGLVSIQSHTITHPADLRTLDDAALERELVESKRILEEKLGHPVHYLAYPVGNQDERVRQGAIDAGYRLSFTMD
LGYTGQSGSLLALQRFIDSRLPLALAGVGAVADTRVNMEAPVTLHEQTHRRVRLVWLSGGNYTTRHSEGNRYPVGDFIER
ERAVGGINGGFFAFAGLRATNSDMVGPYLSQNEGRFMPGAPEFDKSLRGRPVVLISATGLRFVPYSPETFDTEAEARAYL
SDLSDLFVAGVWLVNNGQALTTEQIEQFRLSNHSEFRRRTFMGIDKAGLPMVGATLTNVNATQLARALEEAGLREAVLLD
SGFSTSLVHQGKVLVTGHTAPSIPSRIIPHAVLVHPPL
>Mature_517_residues
TAGIAAVFFLPRSAPPPQTSVATPLPPAVGAAELPSAPSGPEDIARSARLARVPAIMYHDIVRRKDVWFDTTVEEFRAQL
EAIRAAGATPITIDQFHEHLKNGAPLPVKPILLTFDDGYLGHLENAYPLLKEFNYPAVFFVHTAYVGALTGKPHMNWEQI
KQIDSEGLVSIQSHTITHPADLRTLDDAALERELVESKRILEEKLGHPVHYLAYPVGNQDERVRQGAIDAGYRLSFTMDL
GYTGQSGSLLALQRFIDSRLPLALAGVGAVADTRVNMEAPVTLHEQTHRRVRLVWLSGGNYTTRHSEGNRYPVGDFIERE
RAVGGINGGFFAFAGLRATNSDMVGPYLSQNEGRFMPGAPEFDKSLRGRPVVLISATGLRFVPYSPETFDTEAEARAYLS
DLSDLFVAGVWLVNNGQALTTEQIEQFRLSNHSEFRRRTFMGIDKAGLPMVGATLTNVNATQLARALEEAGLREAVLLDS
GFSTSLVHQGKVLVTGHTAPSIPSRIIPHAVLVHPPL

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=222, Percent_Identity=26.1261261261261, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787260, Length=116, Percent_Identity=31.8965517241379, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 56672; Mature: 56541

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGIAAVFFLPRSAPPPQTSVATPLPPAVGAAELPSAPSGPEDIARSARLARVPAIMYH
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DIVRRKDVWFDTTVEEFRAQLEAIRAAGATPITIDQFHEHLKNGAPLPVKPILLTFDDGY
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCC
LGHLENAYPLLKEFNYPAVFFVHTAYVGALTGKPHMNWEQIKQIDSEGLVSIQSHTITHP
CCCHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCC
ADLRTLDDAALERELVESKRILEEKLGHPVHYLAYPVGNQDERVRQGAIDAGYRLSFTMD
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCEEEEEEEE
LGYTGQSGSLLALQRFIDSRLPLALAGVGAVADTRVNMEAPVTLHEQTHRRVRLVWLSGG
ECCCCCCCCHHHHHHHHHCCCCEEEECCCHHCCCEECCCCCEEECCCCCCEEEEEEEECC
NYTTRHSEGNRYPVGDFIERERAVGGINGGFFAFAGLRATNSDMVGPYLSQNEGRFMPGA
CEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
PEFDKSLRGRPVVLISATGLRFVPYSPETFDTEAEARAYLSDLSDLFVAGVWLVNNGQAL
CCHHHHCCCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCEE
TTEQIEQFRLSNHSEFRRRTFMGIDKAGLPMVGATLTNVNATQLARALEEAGLREAVLLD
CHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEECCEECCCCHHHHHHHHHHCCCCEEEEEC
SGFSTSLVHQGKVLVTGHTAPSIPSRIIPHAVLVHPPL
CCCCHHHEECCEEEEECCCCCCCCHHHCCCEEEECCCC
>Mature Secondary Structure 
TAGIAAVFFLPRSAPPPQTSVATPLPPAVGAAELPSAPSGPEDIARSARLARVPAIMYH
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DIVRRKDVWFDTTVEEFRAQLEAIRAAGATPITIDQFHEHLKNGAPLPVKPILLTFDDGY
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCC
LGHLENAYPLLKEFNYPAVFFVHTAYVGALTGKPHMNWEQIKQIDSEGLVSIQSHTITHP
CCCHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCC
ADLRTLDDAALERELVESKRILEEKLGHPVHYLAYPVGNQDERVRQGAIDAGYRLSFTMD
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCEEEEEEEE
LGYTGQSGSLLALQRFIDSRLPLALAGVGAVADTRVNMEAPVTLHEQTHRRVRLVWLSGG
ECCCCCCCCHHHHHHHHHCCCCEEEECCCHHCCCEECCCCCEEECCCCCCEEEEEEEECC
NYTTRHSEGNRYPVGDFIERERAVGGINGGFFAFAGLRATNSDMVGPYLSQNEGRFMPGA
CEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
PEFDKSLRGRPVVLISATGLRFVPYSPETFDTEAEARAYLSDLSDLFVAGVWLVNNGQAL
CCHHHHCCCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCEE
TTEQIEQFRLSNHSEFRRRTFMGIDKAGLPMVGATLTNVNATQLARALEEAGLREAVLLD
CHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEECCEECCCCHHHHHHHHHHCCCCEEEEEC
SGFSTSLVHQGKVLVTGHTAPSIPSRIIPHAVLVHPPL
CCCCHHHEECCEEEEECCCCCCCCHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]