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The map label for this gene is ccmK [H]

Identifier: 37521664

GI number: 37521664

Start: 2248595

End: 2248936

Strand: Reverse

Name: ccmK [H]

Synonym: gvip288

Alternate gene names: 37521664

Gene position: 2248936-2248595 (Counterclockwise)

Preceding gene: 37521665

Following gene: 37521663

Centisome position: 48.27

GC content: 63.16

Gene sequence:

>342_bases
ATGGCAGTTGCAGTTGGCATGATTGAAACCCTGGGTTTTCCGGCCGTGGTCGAGGCGGCGGATGCGATGGTCAAGGCGGC
CCGGGTGACCCTGGTCGGTTATGAGAAGATCAGCAGCGGCCGGGTCACGGTGATCGTGCGCGGCGATGTTTCCGAGGTGC
AAGCTTCGGTGGCGGCGGGGATCGAATCGATCAAGCGCGTCTACGGCGGTCAGTTGCTCTCGCACCACATCATCGCCCGT
CCCCACGAGAACCTCGAGTACGTGCTGCCCATCCGCTACACCGAGGCGGTCGAGCAGTTCCGCGAGGGCGTCAACTCTAT
CCGTCCTTACGGCAGACCCTGA

Upstream 100 bases:

>100_bases
GAGAACCTCGAGTACGTGCTGCCGATTCGCTACACCGAAGCGGTCGAGCAGTTCCGAACTTGATGGGTTGCGTTTGTGTG
TTTTTTAAGGAGGAATCTGA

Downstream 100 bases:

>100_bases
TGCAGATTGGCAGAGTCCGCGGCACAGTGGTCAGCTCGCAAAAAGAGCCCAGCATGGTCGGGGTGAAATTTTTGCTGCTG
CAGCTTATCGATGAGGCCGG

Product: carbon dioxide concentrating mechanism protein CcmK-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAVAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKISSGRVTVIVRGDVSEVQASVAAGIESIKRVYGGQLLSHHIIAR
PHENLEYVLPIRYTEAVEQFREGVNSIRPYGRP

Sequences:

>Translated_113_residues
MAVAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKISSGRVTVIVRGDVSEVQASVAAGIESIKRVYGGQLLSHHIIAR
PHENLEYVLPIRYTEAVEQFREGVNSIRPYGRP
>Mature_112_residues
AVAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKISSGRVTVIVRGDVSEVQASVAAGIESIKRVYGGQLLSHHIIARP
HENLEYVLPIRYTEAVEQFREGVNSIRPYGRP

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=88, Percent_Identity=53.4090909090909, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 12234; Mature: 12103

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKISSGRVTVIVRGDVSEVQASVAAG
CCEEHHHHHHCCCHHHHHHHHHHHHHHHHHEEEHEECCCCCEEEEEECCHHHHHHHHHHH
IESIKRVYGGQLLSHHIIARPHENLEYVLPIRYTEAVEQFREGVNSIRPYGRP
HHHHHHHHCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKISSGRVTVIVRGDVSEVQASVAAG
CEEHHHHHHCCCHHHHHHHHHHHHHHHHHEEEHEECCCCCEEEEEECCHHHHHHHHHHH
IESIKRVYGGQLLSHHIIARPHENLEYVLPIRYTEAVEQFREGVNSIRPYGRP
HHHHHHHHCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]