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The map label for this gene is ccmL [H]

Identifier: 37521663

GI number: 37521663

Start: 2248293

End: 2248595

Strand: Reverse

Name: ccmL [H]

Synonym: gvip287

Alternate gene names: 37521663

Gene position: 2248595-2248293 (Counterclockwise)

Preceding gene: 37521664

Following gene: 37521662

Centisome position: 48.26

GC content: 62.71

Gene sequence:

>303_bases
ATGCAGATTGGCAGAGTCCGCGGCACAGTGGTCAGCTCGCAAAAAGAGCCCAGCATGGTCGGGGTGAAATTTTTGCTGCT
GCAGCTTATCGATGAGGCCGGCCAGCCGCTTCCCCAATACGAAGTGGCGGCCGACGGCGTCGGGGCCGGGCTCGACGAAT
GGGTACTGTTCAGCCGCGGCAGTGCGGCCAGGCAGGTGGCGGGCAGTGAAAAGCGTCCAGTCGACGCGGTGGTGATCGGC
ATCATCGACACGGTCAGCGTCGACAACCGCCCGCTCTACAGCAAAAAGGACCAGTACCGCTAG

Upstream 100 bases:

>100_bases
CCCACGAGAACCTCGAGTACGTGCTGCCCATCCGCTACACCGAGGCGGTCGAGCAGTTCCGCGAGGGCGTCAACTCTATC
CGTCCTTACGGCAGACCCTG

Downstream 100 bases:

>100_bases
CAGGTTGAATGCGTTTGGAGGAATCGGTTGATGGTTGCACAAAGCCGCCTTGCGGCTCCCCCTACCCCGTGGTCGAGACG
GTTGGCTGAAGCCGCAATCG

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MQIGRVRGTVVSSQKEPSMVGVKFLLLQLIDEAGQPLPQYEVAADGVGAGLDEWVLFSRGSAARQVAGSEKRPVDAVVIG
IIDTVSVDNRPLYSKKDQYR

Sequences:

>Translated_100_residues
MQIGRVRGTVVSSQKEPSMVGVKFLLLQLIDEAGQPLPQYEVAADGVGAGLDEWVLFSRGSAARQVAGSEKRPVDAVVIG
IIDTVSVDNRPLYSKKDQYR
>Mature_100_residues
MQIGRVRGTVVSSQKEPSMVGVKFLLLQLIDEAGQPLPQYEVAADGVGAGLDEWVLFSRGSAARQVAGSEKRPVDAVVIG
IIDTVSVDNRPLYSKKDQYR

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.typhimurium CchB [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=95, Percent_Identity=40, Blast_Score=75, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 10830; Mature: 10830

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIGRVRGTVVSSQKEPSMVGVKFLLLQLIDEAGQPLPQYEVAADGVGAGLDEWVLFSRG
CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCC
SAARQVAGSEKRPVDAVVIGIIDTVSVDNRPLYSKKDQYR
CHHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQIGRVRGTVVSSQKEPSMVGVKFLLLQLIDEAGQPLPQYEVAADGVGAGLDEWVLFSRG
CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCC
SAARQVAGSEKRPVDAVVIGIIDTVSVDNRPLYSKKDQYR
CHHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]