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The map label for this gene is cupB

Identifier: 37521650

GI number: 37521650

Start: 2232745

End: 2233872

Strand: Reverse

Name: cupB

Synonym: gvip276

Alternate gene names: NA

Gene position: 2233872-2232745 (Counterclockwise)

Preceding gene: 37521651

Following gene: 37521648

Centisome position: 47.95

GC content: 60.46

Gene sequence:

>1128_bases
GTGGTGATGTACGACCAGAAAGGCTCTTCCCATCCCCTCGGCAAGGTGATCTTGCGGATGGAGGCGGGCGGGGCGCTCCT
GCCCGACGGTTCCGACAACCTGATGGAGGTGGTCGGTGTCCTCAAAAGCTACGGCGTGGTGCTCGACGCCTACTGGCGCA
ACCTGCTCTACATCGCCGATCGCCAGTTTCTGGTCTTCTTTCCGTTTTTCAAGTATTTCAACGGCAAGGTGAGCCTGCCG
AAGCTGCTCGATCACTGGGCCCACCAGCGAATTAATTACGAATTTTCTGAGTACTGCATGAAGGCGATGCTCTGGCACGG
GGCCGCCAAACTCGACGCCTACCTGGACAGCCCCGCCTTTGCCGAGCGGGCCGAGCGGGCGATCCGCGCCAAGATCAAGT
TCAACCCGGCCGCCGGGCTGTTGCACCGCATATTCCCGGATTTCCTGCCGGAGTGGGCGCGCCAGAGCTGTTACTACAGC
GTGCTGGGGCAGTTCTGGCGGGTGATGAGCCCGATGTTTCTGATCCTTTCCGACCGCTACGACCGGGGTGAGATCCGCTC
GATTCCCGACGTGGTGGCCCACATCAAAGACGGTCTGGTGGAGGCGGCGAATCTGCCCCTTACCTACGCGGTCGATATTC
GCGGCGAGCACTACGAACTGATTCCGGCCGAGGCCGGACTGCACTTTTTGATGGACGCCGCGGTGCCCTACGTCGAAGCG
GTTTTCTTCCGCTCGTTTCCGTTTATGGGCACGGTCTCCTACAACGCCCAGGCGGGCCAAATTTCCGAAAATCAGGCCGA
TTTCAACTACGGCGCGCTCTACGCCGATCCGCTTCCCATCGGCGGCTCGGGCATTCCGCCGACGCTGTTGATGCAGGACA
TGAAGCAGCACCTGCCCAAGTACCTGCGCGAGTATTACCTGGGCAGCCTGCGCGGCGAAGAAGACATGCGGGTGCAAATC
TGCGTGAGCTTCCAAAAATCGATGTTCTGTGTCACCACCGCCGCCATGCTGGGTCTTGCCCCCTACCCAATCGATACCGA
CGGACCTGATCAGCAGCGGGCCAACCGCGCCTATCTTGAAAACTGGATGGACCGGCTAATGCATTCTCGGCTGCCGGCGT
TCAACTGA

Upstream 100 bases:

>100_bases
CGCCGAGCGGCCCGCCCTGGCGGACGCGCTGCCCGCTAAAGCCGAGCGCACCCACACCGTCGCGGTGCGCCGCGCCCCTA
CCCCCTAAGGAGAACCGTCC

Downstream 100 bases:

>100_bases
TTGGAAGTACACGCACTCTCGAACGACCCCTATCTACAACAACAAGGGCTCCTACCTCCAATTCAGTTTGAAACTGATGC
AGAGCGCTGGCGACGACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: CO2 Hydration Protein ChpX; CO2-Hydration Protein; Carbon Dioxide Hydration Protein; CO2 Hydration; High Affinity CO2 Uptake Protein; Low Affinity CO2 Uptake Protein; Uptake

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MVMYDQKGSSHPLGKVILRMEAGGALLPDGSDNLMEVVGVLKSYGVVLDAYWRNLLYIADRQFLVFFPFFKYFNGKVSLP
KLLDHWAHQRINYEFSEYCMKAMLWHGAAKLDAYLDSPAFAERAERAIRAKIKFNPAAGLLHRIFPDFLPEWARQSCYYS
VLGQFWRVMSPMFLILSDRYDRGEIRSIPDVVAHIKDGLVEAANLPLTYAVDIRGEHYELIPAEAGLHFLMDAAVPYVEA
VFFRSFPFMGTVSYNAQAGQISENQADFNYGALYADPLPIGGSGIPPTLLMQDMKQHLPKYLREYYLGSLRGEEDMRVQI
CVSFQKSMFCVTTAAMLGLAPYPIDTDGPDQQRANRAYLENWMDRLMHSRLPAFN

Sequences:

>Translated_375_residues
MVMYDQKGSSHPLGKVILRMEAGGALLPDGSDNLMEVVGVLKSYGVVLDAYWRNLLYIADRQFLVFFPFFKYFNGKVSLP
KLLDHWAHQRINYEFSEYCMKAMLWHGAAKLDAYLDSPAFAERAERAIRAKIKFNPAAGLLHRIFPDFLPEWARQSCYYS
VLGQFWRVMSPMFLILSDRYDRGEIRSIPDVVAHIKDGLVEAANLPLTYAVDIRGEHYELIPAEAGLHFLMDAAVPYVEA
VFFRSFPFMGTVSYNAQAGQISENQADFNYGALYADPLPIGGSGIPPTLLMQDMKQHLPKYLREYYLGSLRGEEDMRVQI
CVSFQKSMFCVTTAAMLGLAPYPIDTDGPDQQRANRAYLENWMDRLMHSRLPAFN
>Mature_375_residues
MVMYDQKGSSHPLGKVILRMEAGGALLPDGSDNLMEVVGVLKSYGVVLDAYWRNLLYIADRQFLVFFPFFKYFNGKVSLP
KLLDHWAHQRINYEFSEYCMKAMLWHGAAKLDAYLDSPAFAERAERAIRAKIKFNPAAGLLHRIFPDFLPEWARQSCYYS
VLGQFWRVMSPMFLILSDRYDRGEIRSIPDVVAHIKDGLVEAANLPLTYAVDIRGEHYELIPAEAGLHFLMDAAVPYVEA
VFFRSFPFMGTVSYNAQAGQISENQADFNYGALYADPLPIGGSGIPPTLLMQDMKQHLPKYLREYYLGSLRGEEDMRVQI
CVSFQKSMFCVTTAAMLGLAPYPIDTDGPDQQRANRAYLENWMDRLMHSRLPAFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42725; Mature: 42725

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMYDQKGSSHPLGKVILRMEAGGALLPDGSDNLMEVVGVLKSYGVVLDAYWRNLLYIAD
CEEECCCCCCCCHHHEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RQFLVFFPFFKYFNGKVSLPKLLDHWAHQRINYEFSEYCMKAMLWHGAAKLDAYLDSPAF
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHCCCHH
AERAERAIRAKIKFNPAAGLLHRIFPDFLPEWARQSCYYSVLGQFWRVMSPMFLILSDRY
HHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
DRGEIRSIPDVVAHIKDGLVEAANLPLTYAVDIRGEHYELIPAEAGLHFLMDAAVPYVEA
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHCCHHHHHHHHHHHHHH
VFFRSFPFMGTVSYNAQAGQISENQADFNYGALYADPLPIGGSGIPPTLLMQDMKQHLPK
HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
YLREYYLGSLRGEEDMRVQICVSFQKSMFCVTTAAMLGLAPYPIDTDGPDQQRANRAYLE
HHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
NWMDRLMHSRLPAFN
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MVMYDQKGSSHPLGKVILRMEAGGALLPDGSDNLMEVVGVLKSYGVVLDAYWRNLLYIAD
CEEECCCCCCCCHHHEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RQFLVFFPFFKYFNGKVSLPKLLDHWAHQRINYEFSEYCMKAMLWHGAAKLDAYLDSPAF
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHCCCHH
AERAERAIRAKIKFNPAAGLLHRIFPDFLPEWARQSCYYSVLGQFWRVMSPMFLILSDRY
HHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
DRGEIRSIPDVVAHIKDGLVEAANLPLTYAVDIRGEHYELIPAEAGLHFLMDAAVPYVEA
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHCCHHHHHHHHHHHHHH
VFFRSFPFMGTVSYNAQAGQISENQADFNYGALYADPLPIGGSGIPPTLLMQDMKQHLPK
HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
YLREYYLGSLRGEEDMRVQICVSFQKSMFCVTTAAMLGLAPYPIDTDGPDQQRANRAYLE
HHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
NWMDRLMHSRLPAFN
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA