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The map label for this gene is yrbE [H]

Identifier: 37521429

GI number: 37521429

Start: 1981249

End: 1982280

Strand: Direct

Name: yrbE [H]

Synonym: glr1860

Alternate gene names: 37521429

Gene position: 1981249-1982280 (Clockwise)

Preceding gene: 37521428

Following gene: 37521430

Centisome position: 42.53

GC content: 61.05

Gene sequence:

>1032_bases
ATGCTGCAAAATACGGGTGACTCCGTGCCCATCCGCGTCGGTGTCATCGGCGTGGGCAACATGGGCCAGCACCATACCCG
GGTGCTGAGTCTGCTCAAGGATGTGACCCTGGTCGGCATTGCCGATGTCGACGAAGCGCGCGGCCTGGATGTAGCCAGTA
AATACCGGGTGCAGTTTTTTAAAGACTACCGTGAACTGATCGAGCACGTCGAGGCCGTCTGCATCGCGGTGCCCACCCGC
CTGCACTACACCGTCGGGCAGGAGTGTCTCAAATCGCGGCGGCACATTTTGATCGAAAAGCCGATTGCCGCCCACATCTC
CGAGGCCGAAGAACTGGTCAACCTCGCCGCCCAAAACGGCCGCATTTTGCAAGTGGGCCACATCGAGCGCTTCAACCCGG
CCTTTCGCGAGTTGCGCAACGTCCTCAAGCAAGAAGAACTGCTCGCCTTCGAAGCCCACCGCATGAGCCCCTATTCATCG
CGGGCCAACGACGTTTCGGTGGTCTTCGACTTGATGATCCACGACATCGACTTGCTTTTAGAACTGGTGCCCTACCCGAT
GGCCAAGATGACCGCCGCCGGCAACCGCGCCACCCACTCGGGCTATCTCGACTACGTGACCGCCACGGTCGTCTTCTCCA
ACGGCACCGTCGCCAACCTCACCGCGAGCAAAGTCACCCACCGCAAGATCCGCACCCTCTCGGCCCACTGCAAAAACAGC
CTGGTGGAGGCCGATTTTTTGAGCGGCGAAGTGCTCATCCACCGCCCCCCCGAGTCGGACTACACCACCGAGTACGGCCA
GGTGCTCTACCGCCAGGCGGGCCTGATCGAGAAGGTCCAGACCAGCAATATCGAGCCATTAAGCGCCGAACTCGAACACT
TTATTCACTGTGTGCGCGGTGGCAACCAGCCTTCGGTGGGGGGCGAGCAGGCCCTCAAGGCCCTGCGCCTGGCGGCCCAG
ATCGAGCAGGTGGCCCTCGACGGCAAAATGTGGTATGGTACCGACCCAGATTTGGCGGAGATCCTCGCTTGA

Upstream 100 bases:

>100_bases
CCGCATCTCCGGAATGCGCGATTTCAATTTGCCGGTGATGCCCTGATGGGTGGAGAAGATTCGGTGGTAAAATCCTGATG
TTTTGTTAAGTGGAATATCC

Downstream 100 bases:

>100_bases
TACCGATGCTCGACCTGTCGCTACAGACAGCCCGACTGCTTCCTGAAATCGAAAAGACCCTGCACGAAATTTGCACCGGC
GGCAGTTTTATCCTCGGTCG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLQNTGDSVPIRVGVIGVGNMGQHHTRVLSLLKDVTLVGIADVDEARGLDVASKYRVQFFKDYRELIEHVEAVCIAVPTR
LHYTVGQECLKSRRHILIEKPIAAHISEAEELVNLAAQNGRILQVGHIERFNPAFRELRNVLKQEELLAFEAHRMSPYSS
RANDVSVVFDLMIHDIDLLLELVPYPMAKMTAAGNRATHSGYLDYVTATVVFSNGTVANLTASKVTHRKIRTLSAHCKNS
LVEADFLSGEVLIHRPPESDYTTEYGQVLYRQAGLIEKVQTSNIEPLSAELEHFIHCVRGGNQPSVGGEQALKALRLAAQ
IEQVALDGKMWYGTDPDLAEILA

Sequences:

>Translated_343_residues
MLQNTGDSVPIRVGVIGVGNMGQHHTRVLSLLKDVTLVGIADVDEARGLDVASKYRVQFFKDYRELIEHVEAVCIAVPTR
LHYTVGQECLKSRRHILIEKPIAAHISEAEELVNLAAQNGRILQVGHIERFNPAFRELRNVLKQEELLAFEAHRMSPYSS
RANDVSVVFDLMIHDIDLLLELVPYPMAKMTAAGNRATHSGYLDYVTATVVFSNGTVANLTASKVTHRKIRTLSAHCKNS
LVEADFLSGEVLIHRPPESDYTTEYGQVLYRQAGLIEKVQTSNIEPLSAELEHFIHCVRGGNQPSVGGEQALKALRLAAQ
IEQVALDGKMWYGTDPDLAEILA
>Mature_343_residues
MLQNTGDSVPIRVGVIGVGNMGQHHTRVLSLLKDVTLVGIADVDEARGLDVASKYRVQFFKDYRELIEHVEAVCIAVPTR
LHYTVGQECLKSRRHILIEKPIAAHISEAEELVNLAAQNGRILQVGHIERFNPAFRELRNVLKQEELLAFEAHRMSPYSS
RANDVSVVFDLMIHDIDLLLELVPYPMAKMTAAGNRATHSGYLDYVTATVVFSNGTVANLTASKVTHRKIRTLSAHCKNS
LVEADFLSGEVLIHRPPESDYTTEYGQVLYRQAGLIEKVQTSNIEPLSAELEHFIHCVRGGNQPSVGGEQALKALRLAAQ
IEQVALDGKMWYGTDPDLAEILA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787307, Length=333, Percent_Identity=25.5255255255255, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 38037; Mature: 38037

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNTGDSVPIRVGVIGVGNMGQHHTRVLSLLKDVTLVGIADVDEARGLDVASKYRVQFF
CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEEEECCHHHCCCCHHHHHHHHHH
KDYRELIEHVEAVCIAVPTRLHYTVGQECLKSRRHILIEKPIAAHISEAEELVNLAAQNG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCC
RILQVGHIERFNPAFRELRNVLKQEELLAFEAHRMSPYSSRANDVSVVFDLMIHDIDLLL
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
ELVPYPMAKMTAAGNRATHSGYLDYVTATVVFSNGTVANLTASKVTHRKIRTLSAHCKNS
HHHCCCHHHHHCCCCCCCCCCHHHEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHH
LVEADFLSGEVLIHRPPESDYTTEYGQVLYRQAGLIEKVQTSNIEPLSAELEHFIHCVRG
HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GNQPSVGGEQALKALRLAAQIEQVALDGKMWYGTDPDLAEILA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHCC
>Mature Secondary Structure
MLQNTGDSVPIRVGVIGVGNMGQHHTRVLSLLKDVTLVGIADVDEARGLDVASKYRVQFF
CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHEEEECCHHHCCCCHHHHHHHHHH
KDYRELIEHVEAVCIAVPTRLHYTVGQECLKSRRHILIEKPIAAHISEAEELVNLAAQNG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCC
RILQVGHIERFNPAFRELRNVLKQEELLAFEAHRMSPYSSRANDVSVVFDLMIHDIDLLL
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
ELVPYPMAKMTAAGNRATHSGYLDYVTATVVFSNGTVANLTASKVTHRKIRTLSAHCKNS
HHHCCCHHHHHCCCCCCCCCCHHHEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHH
LVEADFLSGEVLIHRPPESDYTTEYGQVLYRQAGLIEKVQTSNIEPLSAELEHFIHCVRG
HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GNQPSVGGEQALKALRLAAQIEQVALDGKMWYGTDPDLAEILA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]