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The map label for this gene is degT [H]

Identifier: 37521430

GI number: 37521430

Start: 1982238

End: 1983386

Strand: Direct

Name: degT [H]

Synonym: glr1861

Alternate gene names: 37521430

Gene position: 1982238-1983386 (Clockwise)

Preceding gene: 37521429

Following gene: 37521432

Centisome position: 42.55

GC content: 65.36

Gene sequence:

>1149_bases
GTGGTATGGTACCGACCCAGATTTGGCGGAGATCCTCGCTTGATACCGATGCTCGACCTGTCGCTACAGACAGCCCGACT
GCTTCCTGAAATCGAAAAGACCCTGCACGAAATTTGCACCGGCGGCAGTTTTATCCTCGGTCGCCATGGCCGCGCCCTCG
AAGCGGAGATCGCGGCTTTGAGCGGGGCGAGTTTCGGCCTCGGCGTCGCCTCGGGCACCGACGCGCTGCACCTGGTACTC
AGGGCCCTGGACATCGGGCCGGGGGACGAGGTGATCACTTCGCCCTTTACGTTCATCGCCACCGCCGAGGCGATCTCCTA
CTGCGGGGCGACGCCGGTCTTCGTCGACATCGACCCGGAGACTTTCAACATCGACCCTGCCCAGATCGAAGCGCGTATCA
CCGGGCGCACCCGGGCGATTTTGCCGGTGCATCTTTTTGGTCAGGCCGCCGACATGGACCCGATTCTGGAGATTGGCCGT
CGCCGGGGCCTGCACGTCATCGAAGACAGCGCCCAGGCGATCGGCACGCTTTACAAAGACCGTCCGGTCGGTTCGCTGGG
GGTGGCGGGCTGTCTGAGCTTTTATCCCACCAAGAATCTGGGAGCCTTCGGCGATGGGGGCATGGTGGTCACCTCCGACG
AAGGGCTGCGCGATCGCGTCGCTGCGCTGCGGGTGCACGGCCAGACCCGGCGCTACTACCACGACGAAGTCGGTTACTGC
TCGCGCCTCGACGAAATGCAGGCGGCGGTGCTGCGCATCAAACTGCCGCATCTGGAAGGGTGGAACCGCCGCCGCGCCCA
GATCGCCCAGCGCTACAACGCGCTATTCTCCGATCTGCCGCTTGCAACCCCGGCCCGCGCCGCCTATTCGACCCACACCT
ACCACCAGTACACCGTGCGCTCCGTCCACCGCGAGCGCTTCGTGGCGGGCCTGGGCGAGCAAAAAGTCGGGGTGGGCATC
TACTACCCGGTACCGCTGCATCTGCAAAACGCTTATGCCGCCCTGGGCTACCGACCCGGGGATCTGCCCGCAGCGGAGCA
GGCGGCGGCGGAAGTCTTCTCTTTGCCAATGTTTCCGGAGTTGAGCGACGCGCAAATCGAGGGGGTGGCGCGGGCGATGC
GCGCGGCGGCACCGGTGGCCTGGGTCTGA

Upstream 100 bases:

>100_bases
GTGTGCGCGGTGGCAACCAGCCTTCGGTGGGGGGCGAGCAGGCCCTCAAGGCCCTGCGCCTGGCGGCCCAGATCGAGCAG
GTGGCCCTCGACGGCAAAAT

Downstream 100 bases:

>100_bases
AGCAAAAAATTCAGCCCCGGATGAAGTCGTTGGGATTGAGCGTCTGCAAAAAATCCCGGAATGCTTCGCGTTCGGCTTCG
TCGGCTTCTTGATCGACCGG

Product: DegT/DnrJ/EryC1/StrS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MVWYRPRFGGDPRLIPMLDLSLQTARLLPEIEKTLHEICTGGSFILGRHGRALEAEIAALSGASFGLGVASGTDALHLVL
RALDIGPGDEVITSPFTFIATAEAISYCGATPVFVDIDPETFNIDPAQIEARITGRTRAILPVHLFGQAADMDPILEIGR
RRGLHVIEDSAQAIGTLYKDRPVGSLGVAGCLSFYPTKNLGAFGDGGMVVTSDEGLRDRVAALRVHGQTRRYYHDEVGYC
SRLDEMQAAVLRIKLPHLEGWNRRRAQIAQRYNALFSDLPLATPARAAYSTHTYHQYTVRSVHRERFVAGLGEQKVGVGI
YYPVPLHLQNAYAALGYRPGDLPAAEQAAAEVFSLPMFPELSDAQIEGVARAMRAAAPVAWV

Sequences:

>Translated_382_residues
MVWYRPRFGGDPRLIPMLDLSLQTARLLPEIEKTLHEICTGGSFILGRHGRALEAEIAALSGASFGLGVASGTDALHLVL
RALDIGPGDEVITSPFTFIATAEAISYCGATPVFVDIDPETFNIDPAQIEARITGRTRAILPVHLFGQAADMDPILEIGR
RRGLHVIEDSAQAIGTLYKDRPVGSLGVAGCLSFYPTKNLGAFGDGGMVVTSDEGLRDRVAALRVHGQTRRYYHDEVGYC
SRLDEMQAAVLRIKLPHLEGWNRRRAQIAQRYNALFSDLPLATPARAAYSTHTYHQYTVRSVHRERFVAGLGEQKVGVGI
YYPVPLHLQNAYAALGYRPGDLPAAEQAAAEVFSLPMFPELSDAQIEGVARAMRAAAPVAWV
>Mature_382_residues
MVWYRPRFGGDPRLIPMLDLSLQTARLLPEIEKTLHEICTGGSFILGRHGRALEAEIAALSGASFGLGVASGTDALHLVL
RALDIGPGDEVITSPFTFIATAEAISYCGATPVFVDIDPETFNIDPAQIEARITGRTRAILPVHLFGQAADMDPILEIGR
RRGLHVIEDSAQAIGTLYKDRPVGSLGVAGCLSFYPTKNLGAFGDGGMVVTSDEGLRDRVAALRVHGQTRRYYHDEVGYC
SRLDEMQAAVLRIKLPHLEGWNRRRAQIAQRYNALFSDLPLATPARAAYSTHTYHQYTVRSVHRERFVAGLGEQKVGVGI
YYPVPLHLQNAYAALGYRPGDLPAAEQAAAEVFSLPMFPELSDAQIEGVARAMRAAAPVAWV

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=366, Percent_Identity=34.9726775956284, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI2367285, Length=342, Percent_Identity=31.2865497076023, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41602; Mature: 41602

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWYRPRFGGDPRLIPMLDLSLQTARLLPEIEKTLHEICTGGSFILGRHGRALEAEIAAL
CCEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
SGASFGLGVASGTDALHLVLRALDIGPGDEVITSPFTFIATAEAISYCGATPVFVDIDPE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEECCC
TFNIDPAQIEARITGRTRAILPVHLFGQAADMDPILEIGRRRGLHVIEDSAQAIGTLYKD
EECCCHHHEEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHC
RPVGSLGVAGCLSFYPTKNLGAFGDGGMVVTSDEGLRDRVAALRVHGQTRRYYHDEVGYC
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHH
SRLDEMQAAVLRIKLPHLEGWNRRRAQIAQRYNALFSDLPLATPARAAYSTHTYHQYTVR
HHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHH
SVHRERFVAGLGEQKVGVGIYYPVPLHLQNAYAALGYRPGDLPAAEQAAAEVFSLPMFPE
HHHHHHHHHCCCCCCCCEEEEECCCEEECCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
LSDAQIEGVARAMRAAAPVAWV
CCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVWYRPRFGGDPRLIPMLDLSLQTARLLPEIEKTLHEICTGGSFILGRHGRALEAEIAAL
CCEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
SGASFGLGVASGTDALHLVLRALDIGPGDEVITSPFTFIATAEAISYCGATPVFVDIDPE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEECCC
TFNIDPAQIEARITGRTRAILPVHLFGQAADMDPILEIGRRRGLHVIEDSAQAIGTLYKD
EECCCHHHEEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHC
RPVGSLGVAGCLSFYPTKNLGAFGDGGMVVTSDEGLRDRVAALRVHGQTRRYYHDEVGYC
CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHH
SRLDEMQAAVLRIKLPHLEGWNRRRAQIAQRYNALFSDLPLATPARAAYSTHTYHQYTVR
HHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHH
SVHRERFVAGLGEQKVGVGIYYPVPLHLQNAYAALGYRPGDLPAAEQAAAEVFSLPMFPE
HHHHHHHHHCCCCCCCCEEEEECCCEEECCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
LSDAQIEGVARAMRAAAPVAWV
CCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]