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The map label for this gene is ccmA [H]

Identifier: 37521310

GI number: 37521310

Start: 1844948

End: 1846012

Strand: Direct

Name: ccmA [H]

Synonym: gvip240

Alternate gene names: 37521310

Gene position: 1844948-1846012 (Clockwise)

Preceding gene: 37521309

Following gene: 37521313

Centisome position: 39.6

GC content: 63.57

Gene sequence:

>1065_bases
TTGATTGTCGTGCTCAAGCCGGGTGCTCCCCAAGGCGTGGTGGACGCCCTCGTCGACCAGTTGCGCGGCTGGAATCTGGA
AACCCAGACCATCGTCGGGCGTGAAAACGTGGTAATCGGCCTGATTGGTGACACCAGCAGTCTCTGCGACGACCGCGTGC
AGGAACTGAGCCCCTTCATCGACCGGGTTCTGCGGGTCAAAAAGCGCTTCAAGCGCGCCTCGCGCGAATTTCATCCCGAG
CGCACTGTGGTGAGTGTCCCGACGGCGGGCGGCACGGTCGAAATTGGGGGCGAAGGGCCTCTGGTGTGTATGGCGGGTCC
ATGCTCGGTAGAATCCGAAGCGATGATCCTGGAGACGGCCCACCGGGTCAAAGCGGCCGGTGCCCGGATCCTGCGCGGCG
GTGCCTACAAACCGCGCACCTCGCCCTACGACTTTCAAGGCCACGGCGAATCGGCTCTCGAACTGCTGGCTGCCGCCCGT
ACCGCGACAGGCCTGGCTATCGTCACTGAGGTGATGGACACCAGTGATCTCGAAGCCATTGCCGAGGTCGCCGATATTGT
GCAAGTCGGCGCGCGCAACATGCAGAATTATTCGCTGCTCAAAAAAGTCGGTCAGCAGCCCAAGCCGGTGCTGCTGAAGC
GGGCTTTCTCCGCCACCATCGACGAGTGGCTGCTTGCGGCGGAGTATATTTTGGCGGCGGGCAATCCGAATGTGATTCTC
TGCGAGCGGGGTATACGCACTTTCGACCGCCAGTACACCCGCAACACCCTCGATCTGGCCGCTGTGCCGGTTCTGCGCAG
CATTACCCACCTGCCGGTGATTGTCGACCCGAGCCACGGCACTGGCCTATCGCAATTTGTCGAATCGTGCAGCAAGGCGG
CGGTCGCCATCGGCGCCGACGGCTTGATGATCGAAGTACACCCCGATCCGGCCCGCGCCCTTTCGGACGGTCCGCAATGC
CTGACGCCGGACGAGTTTGATGCTGCGATGGCGAACCTAGCCCCGATCGCCCTCGCGGTGGGGCGGCCGCTACAAACGGC
CGCCCCGGCCGCAGCCCGTCCTTGA

Upstream 100 bases:

>100_bases
CCGGCAGCCTGCTGGGCATCAAAGAATTCAAAGAAAACGGTGGGCGGCTGCTCGCGGCGCTGCAAAATGAAGGCGAGAAA
CGTCGAGTGGAGAAAAAATC

Downstream 100 bases:

>100_bases
GCGCTACGCCGCACTGATCAGGTGCAATTCCACTTGCAGTTCGTTTGCCTCGGTTGCCGCAACCTCGGGGAAAAAATTCA
AACGGGCATCGACGCCCTTG

Product: 3-deoxy-7-phosphoheptulonate synthase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MIVVLKPGAPQGVVDALVDQLRGWNLETQTIVGRENVVIGLIGDTSSLCDDRVQELSPFIDRVLRVKKRFKRASREFHPE
RTVVSVPTAGGTVEIGGEGPLVCMAGPCSVESEAMILETAHRVKAAGARILRGGAYKPRTSPYDFQGHGESALELLAAAR
TATGLAIVTEVMDTSDLEAIAEVADIVQVGARNMQNYSLLKKVGQQPKPVLLKRAFSATIDEWLLAAEYILAAGNPNVIL
CERGIRTFDRQYTRNTLDLAAVPVLRSITHLPVIVDPSHGTGLSQFVESCSKAAVAIGADGLMIEVHPDPARALSDGPQC
LTPDEFDAAMANLAPIALAVGRPLQTAAPAAARP

Sequences:

>Translated_354_residues
MIVVLKPGAPQGVVDALVDQLRGWNLETQTIVGRENVVIGLIGDTSSLCDDRVQELSPFIDRVLRVKKRFKRASREFHPE
RTVVSVPTAGGTVEIGGEGPLVCMAGPCSVESEAMILETAHRVKAAGARILRGGAYKPRTSPYDFQGHGESALELLAAAR
TATGLAIVTEVMDTSDLEAIAEVADIVQVGARNMQNYSLLKKVGQQPKPVLLKRAFSATIDEWLLAAEYILAAGNPNVIL
CERGIRTFDRQYTRNTLDLAAVPVLRSITHLPVIVDPSHGTGLSQFVESCSKAAVAIGADGLMIEVHPDPARALSDGPQC
LTPDEFDAAMANLAPIALAVGRPLQTAAPAAARP
>Mature_354_residues
MIVVLKPGAPQGVVDALVDQLRGWNLETQTIVGRENVVIGLIGDTSSLCDDRVQELSPFIDRVLRVKKRFKRASREFHPE
RTVVSVPTAGGTVEIGGEGPLVCMAGPCSVESEAMILETAHRVKAAGARILRGGAYKPRTSPYDFQGHGESALELLAAAR
TATGLAIVTEVMDTSDLEAIAEVADIVQVGARNMQNYSLLKKVGQQPKPVLLKRAFSATIDEWLLAAEYILAAGNPNVIL
CERGIRTFDRQYTRNTLDLAAVPVLRSITHLPVIVDPSHGTGLSQFVESCSKAAVAIGADGLMIEVHPDPARALSDGPQC
LTPDEFDAAMANLAPIALAVGRPLQTAAPAAARP

Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]

COG id: COG2876

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I DAHP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1787466, Length=261, Percent_Identity=22.9885057471264, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006218
- InterPro:   IPR006268 [H]

Pfam domain/function: PF00793 DAHP_synth_1 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 37664; Mature: 37664

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVLKPGAPQGVVDALVDQLRGWNLETQTIVGRENVVIGLIGDTSSLCDDRVQELSPFI
CEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
DRVLRVKKRFKRASREFHPERTVVSVPTAGGTVEIGGEGPLVCMAGPCSVESEAMILETA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHH
HRVKAAGARILRGGAYKPRTSPYDFQGHGESALELLAAARTATGLAIVTEVMDTSDLEAI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AEVADIVQVGARNMQNYSLLKKVGQQPKPVLLKRAFSATIDEWLLAAEYILAAGNPNVIL
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
CERGIRTFDRQYTRNTLDLAAVPVLRSITHLPVIVDPSHGTGLSQFVESCSKAAVAIGAD
ECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHEEEECCC
GLMIEVHPDPARALSDGPQCLTPDEFDAAMANLAPIALAVGRPLQTAAPAAARP
CEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC
>Mature Secondary Structure
MIVVLKPGAPQGVVDALVDQLRGWNLETQTIVGRENVVIGLIGDTSSLCDDRVQELSPFI
CEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
DRVLRVKKRFKRASREFHPERTVVSVPTAGGTVEIGGEGPLVCMAGPCSVESEAMILETA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHH
HRVKAAGARILRGGAYKPRTSPYDFQGHGESALELLAAARTATGLAIVTEVMDTSDLEAI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AEVADIVQVGARNMQNYSLLKKVGQQPKPVLLKRAFSATIDEWLLAAEYILAAGNPNVIL
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
CERGIRTFDRQYTRNTLDLAAVPVLRSITHLPVIVDPSHGTGLSQFVESCSKAAVAIGAD
ECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHEEEECCC
GLMIEVHPDPARALSDGPQCLTPDEFDAAMANLAPIALAVGRPLQTAAPAAARP
CEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571; 12743122 [H]