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The map label for this gene is rbsC [H]

Identifier: 37521299

GI number: 37521299

Start: 1835652

End: 1836632

Strand: Direct

Name: rbsC [H]

Synonym: glr1730

Alternate gene names: 37521299

Gene position: 1835652-1836632 (Clockwise)

Preceding gene: 37521298

Following gene: 37521300

Centisome position: 39.4

GC content: 63.91

Gene sequence:

>981_bases
ATGGGCGAGAGCACGTCAAAAAACCCAAAACTCCTCACCCTACCGGATTGGTTGCGTGAATGGCTCGCCCGCCAGACTGC
CTACGGCCCGGCCATCGCCGTACTGATCGAGATCGTCGTCTTCAGCGCCATCGCCCCGGGCTTTTTTACCCTCGAGAACT
TCATCAACATCTCGCTGCAGACGGCGATTTTCGGCATCCTGGCGGTCGGAATGACACTGGTGATCCTGACGGGCGGCATC
GATCTGTCGGTGGGATCGGTGGTGGCCCTTGCCGGGGTGAGCGGGGCCATGGTCGCCCAAGCGGGCGGGCTCGGCATGCC
CGTGGCCATCGTGGTAGGCGGTGGGGTCGGGCTTTTGAGCGGTCTGTTGGTGGCGTACTTTCGGGTGGCTCCGTTTGTGG
TCACCCTGGCCGGGCTCACCATTGCCCGCGGCCTCGCCTTTTTGCTCACCGGCGGCCGGTCGATCGGCGGTTTGCCGCCC
GACTTCACCTTCTGGGGCCAAAAACAGCTCGGCTTACTGCCGCTGCCAGTGCTCGTCTTGATGGTAGTGGTGACCGGAGG
ATACTTTTTGCTCACCCGCACAGTCTTCGGCCGCCAGATCTACGCCATCGGCGGCAACGCCGAGGCGAGTTGGCTCGCGG
GAGTGCCGGTGCAAGGGGTGCTGGTGGCGGTCTATCTCATCAACGGCTTGCTCGCGGGGCTCGCGGGCGGGATGCTCGCC
GCCCGGCTCGGAGCCGGAATTCCCAATAGCGGCCAACTCTACGAATTGGAGGTGATCGCAGCGGTAGTGGTGGGGGGCAC
CAGTTTGAGCGGCGGCCGAGGAGGAGTACTCGGCAGTCTGCTCGGGGCGCTGTTTATCGGCACCCTCGGCAACGGTCTCA
ATCTGCTGGGCGTCGATCCGTACCTGCAAAAAATCGTACTGGGAGTGGTGATCCTGGCGGCTGTGCTCGTCGATAGCGCC
GGACGGCGGGGACAAAGATGA

Upstream 100 bases:

>100_bases
TGCCAAGCCAACAGCAAGTGTCAGGTCACAGACATCGGTAGGAACTTCCGGCAATAGCGGCATTTCTCTGGCACACTGTG
TCGAGAAGCCAGCGACAGTC

Downstream 100 bases:

>100_bases
GCGGGATCGCTCTGCGCAGGCGGCGGGAGCAAGCCCAACGGCGGCGCTCCATCGCGGGAGTGCTCGCGGCGGTGGGTGGG
GGCACAGCCCTGGGCCTTGC

Product: sugar transporter permease protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MGESTSKNPKLLTLPDWLREWLARQTAYGPAIAVLIEIVVFSAIAPGFFTLENFINISLQTAIFGILAVGMTLVILTGGI
DLSVGSVVALAGVSGAMVAQAGGLGMPVAIVVGGGVGLLSGLLVAYFRVAPFVVTLAGLTIARGLAFLLTGGRSIGGLPP
DFTFWGQKQLGLLPLPVLVLMVVVTGGYFLLTRTVFGRQIYAIGGNAEASWLAGVPVQGVLVAVYLINGLLAGLAGGMLA
ARLGAGIPNSGQLYELEVIAAVVVGGTSLSGGRGGVLGSLLGALFIGTLGNGLNLLGVDPYLQKIVLGVVILAAVLVDSA
GRRGQR

Sequences:

>Translated_326_residues
MGESTSKNPKLLTLPDWLREWLARQTAYGPAIAVLIEIVVFSAIAPGFFTLENFINISLQTAIFGILAVGMTLVILTGGI
DLSVGSVVALAGVSGAMVAQAGGLGMPVAIVVGGGVGLLSGLLVAYFRVAPFVVTLAGLTIARGLAFLLTGGRSIGGLPP
DFTFWGQKQLGLLPLPVLVLMVVVTGGYFLLTRTVFGRQIYAIGGNAEASWLAGVPVQGVLVAVYLINGLLAGLAGGMLA
ARLGAGIPNSGQLYELEVIAAVVVGGTSLSGGRGGVLGSLLGALFIGTLGNGLNLLGVDPYLQKIVLGVVILAAVLVDSA
GRRGQR
>Mature_325_residues
GESTSKNPKLLTLPDWLREWLARQTAYGPAIAVLIEIVVFSAIAPGFFTLENFINISLQTAIFGILAVGMTLVILTGGID
LSVGSVVALAGVSGAMVAQAGGLGMPVAIVVGGGVGLLSGLLVAYFRVAPFVVTLAGLTIARGLAFLLTGGRSIGGLPPD
FTFWGQKQLGLLPLPVLVLMVVVTGGYFLLTRTVFGRQIYAIGGNAEASWLAGVPVQGVLVAVYLINGLLAGLAGGMLAA
RLGAGIPNSGQLYELEVIAAVVVGGTSLSGGRGGVLGSLLGALFIGTLGNGLNLLGVDPYLQKIVLGVVILAAVLVDSAG
RRGQR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=316, Percent_Identity=43.0379746835443, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1788896, Length=305, Percent_Identity=38.3606557377049, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1790524, Length=322, Percent_Identity=35.4037267080745, Blast_Score=164, Evalue=5e-42,
Organism=Escherichia coli, GI145693152, Length=302, Percent_Identity=34.7682119205298, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI87082395, Length=277, Percent_Identity=38.9891696750903, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1789992, Length=138, Percent_Identity=50.7246376811594, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI145693214, Length=270, Percent_Identity=39.6296296296296, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1787794, Length=303, Percent_Identity=31.023102310231, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787793, Length=292, Percent_Identity=34.2465753424658, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1788471, Length=315, Percent_Identity=34.9206349206349, Blast_Score=114, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33044; Mature: 32913

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGESTSKNPKLLTLPDWLREWLARQTAYGPAIAVLIEIVVFSAIAPGFFTLENFINISLQ
CCCCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TAIFGILAVGMTLVILTGGIDLSVGSVVALAGVSGAMVAQAGGLGMPVAIVVGGGVGLLS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCHHHHH
GLLVAYFRVAPFVVTLAGLTIARGLAFLLTGGRSIGGLPPDFTFWGQKQLGLLPLPVLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
MVVVTGGYFLLTRTVFGRQIYAIGGNAEASWLAGVPVQGVLVAVYLINGLLAGLAGGMLA
HHHHHCCHHHHHHHHHCCEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARLGAGIPNSGQLYELEVIAAVVVGGTSLSGGRGGVLGSLLGALFIGTLGNGLNLLGVDP
HHHCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH
YLQKIVLGVVILAAVLVDSAGRRGQR
HHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GESTSKNPKLLTLPDWLREWLARQTAYGPAIAVLIEIVVFSAIAPGFFTLENFINISLQ
CCCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TAIFGILAVGMTLVILTGGIDLSVGSVVALAGVSGAMVAQAGGLGMPVAIVVGGGVGLLS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCHHHHH
GLLVAYFRVAPFVVTLAGLTIARGLAFLLTGGRSIGGLPPDFTFWGQKQLGLLPLPVLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
MVVVTGGYFLLTRTVFGRQIYAIGGNAEASWLAGVPVQGVLVAVYLINGLLAGLAGGMLA
HHHHHCCHHHHHHHHHCCEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARLGAGIPNSGQLYELEVIAAVVVGGTSLSGGRGGVLGSLLGALFIGTLGNGLNLLGVDP
HHHCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCH
YLQKIVLGVVILAAVLVDSAGRRGQR
HHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]